Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G15356.1 | Thale cress | extracellular | 85.14 | 86.72 |
| CDX97656 | Canola | extracellular | 84.06 | 84.06 |
| Bra027257.1-P | Field mustard | extracellular | 83.7 | 83.7 |
| CDY72663 | Canola | extracellular | 80.8 | 83.52 |
| CDY21835 | Canola | extracellular | 81.88 | 81.88 |
| Bra021101.1-P | Field mustard | extracellular | 81.52 | 81.52 |
| CDY20121 | Canola | extracellular | 81.52 | 81.52 |
| AT5G03350.1 | Thale cress | extracellular | 64.49 | 64.96 |
| CDX75822 | Canola | plastid | 26.81 | 63.25 |
| AT1G53080.1 | Thale cress | extracellular | 62.32 | 60.78 |
| AT1G53070.1 | Thale cress | extracellular | 51.45 | 52.21 |
| AT1G53060.1 | Thale cress | cytosol, nucleus, plastid | 44.93 | 51.24 |
| HORVU2Hr1G043510.1 | Barley | extracellular | 23.91 | 25.48 |
| HORVU3Hr1G113660.1 | Barley | extracellular, vacuole | 25.72 | 20.82 |
| HORVU7Hr1G009980.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 25.0 | 20.23 |
| GSMUA_Achr6P33000_001 | Banana | golgi | 24.28 | 19.53 |
| HORVU5Hr1G036880.1 | Barley | cytosol | 12.32 | 18.68 |
| HORVU2Hr1G099010.1 | Barley | cytosol | 14.86 | 11.42 |
| HORVU1Hr1G013700.1 | Barley | plastid, vacuole | 27.54 | 10.01 |
Protein Annotations
| MapMan:18.4.1.19 | Gene3D:2.60.120.200 | EntrezGene:820901 | ProteinID:AEE75832.1 | EMBL:AF428361 | ArrayExpress:AT3G16530 |
| EnsemblPlantsGene:AT3G16530 | RefSeq:AT3G16530 | TAIR:AT3G16530 | RefSeq:AT3G16530-TAIR-G | EnsemblPlants:AT3G16530.1 | TAIR:AT3G16530.1 |
| EMBL:AY054194 | EMBL:AY066032 | Unigene:At.6162 | ProteinID:BAB01152.1 | InterPro:ConA-like_dom_sf | GO:GO:0002239 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0009505 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009719 | GO:GO:0010200 | GO:GO:0030246 | GO:GO:0030312 | GO:GO:0048046 | InterPro:L-lectin |
| InterPro:Legume_lectin_dom | RefSeq:NP_188274.1 | PFAM:PF00139 | PIRSF:PIRSF002690 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PANTHER:PTHR32401 | PANTHER:PTHR32401:SF5 | UniProt:Q9LK72 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI000009C71D |
| SEG:seg | : | : | : | : | : |
Description
Lectin-like protein At3g16530 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK72]
Coordinates
chr3:-:5624326..5625519
Molecular Weight (calculated)
30510.9 Da
IEP (calculated)
7.720
GRAVY (calculated)
-0.289
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIHKLCFLV LFLANAAFAV KFNFDSFDGS NLLFLGDAEL GPSSDGVSRS GALSMTRDEN PFSHGQGLYI NQIPFKPSNT SSPFSFETSF TFSITPRTKP
101: NSGQGFAFII TPEADNSGAS DGGYLGILNK TNDGKPENHI LAIEFDTFQN KEFLDISGNH VGVNINSMTS LVAEKAGYWV QTRVGKRKVW SFKDVNLSSG
201: ERFKAWVEFR NKDSTITVTL APENVKKPKR ALIEAPRVLN EVLLQNMYAG FAGSMGRAVE RHDIWSWSFE NAAKNN
101: NSGQGFAFII TPEADNSGAS DGGYLGILNK TNDGKPENHI LAIEFDTFQN KEFLDISGNH VGVNINSMTS LVAEKAGYWV QTRVGKRKVW SFKDVNLSSG
201: ERFKAWVEFR NKDSTITVTL APENVKKPKR ALIEAPRVLN EVLLQNMYAG FAGSMGRAVE RHDIWSWSFE NAAKNN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.