Factsheet for AT1G53070.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 4
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24119	Canola	mitochondrion, plastid	66.54	81.17
CDY24120	Canola	extracellular	78.68	78.1
Bra019012.1-P	Field mustard	extracellular	78.68	78.1
CDY26013	Canola	extracellular	78.31	77.45
CDY26012	Canola	extracellular	77.21	76.64
Bra019013.1-P	Field mustard	extracellular	77.21	76.09
AT1G53060.1	Thale cress	cytosol, nucleus, plastid	57.35	64.46
AT1G53080.1	Thale cress	extracellular	62.87	60.42
AT5G03350.1	Thale cress	extracellular	57.35	56.93
AT3G16530.1	Thale cress	extracellular	52.21	51.45
AT3G15356.1	Thale cress	extracellular	50.74	50.92
HORVU2Hr1G043510.1	Barley	extracellular	24.63	25.87
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	26.47	21.11
HORVU5Hr1G036880.1	Barley	cytosol	13.97	20.88
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	25.37	20.23
GSMUA_Achr6P33000_001	Banana	golgi	23.53	18.66
HORVU2Hr1G099010.1	Barley	cytosol	15.44	11.7
HORVU1Hr1G013700.1	Barley	plastid, vacuole	27.94	10.01

Protein Annotations

MapMan:18.4.1.19	Gene3D:2.60.120.200	EntrezGene:841741	UniProt:A0A178WIL2	ProteinID:AAF87861.1	ProteinID:AEE32886.1
EMBL:AK229567	ArrayExpress:AT1G53070	EnsemblPlantsGene:AT1G53070	RefSeq:AT1G53070	TAIR:AT1G53070	RefSeq:AT1G53070-TAIR-G
EnsemblPlants:AT1G53070.1	TAIR:AT1G53070.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0009505	GO:GO:0009628	GO:GO:0030246	GO:GO:0030312	GO:GO:0048046
GO:GO:0080167	InterPro:L-lectin	InterPro:Legume_lectin_dom	RefSeq:NP_175715.1	ProteinID:OAP18218.1	PFAM:PF00139
PIRSF:PIRSF002690	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5	UniProt:Q9LNN2	SUPFAM:SSF49899
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000048390	SEG:seg	:	:

Description

Lectin-like protein At1g53070 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNN2]

Coordinates

chr1:+:19778133..19779447

Molecular Weight (calculated)

30379.9 Da

IEP (calculated)

8.843

GRAVY (calculated)

-0.259

Length

272 amino acids

Sequence
(BLAST)

001: MKIQILCFTT LFLAIFTSQV TTAYKFKFDY FGNGTDPISF HGDAEYGPDT DGKSRSGAIA LTRDNIPFSH GRAIFTTPIT FKPNASALYP FKTSFTFSIT
101: PKTNPNQGHG LAFIVVPSNQ NDAGSGLGYL SLLNRTNNGN PNNHLFAVEF DVFQDKSLGD MNDNHVGIDI NSVDSVVSVK SGYWVMTRSG WLFKDLKLSS
201: GDRYKAWIEY NNNYKVVSVT IGLAHLKKPN RPLIEAKFDL SKVIHEVMYT GFAGSMGRGV ERHEIWDWTF QN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.