CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24119	Canola	mitochondrion, plastid	79.2	97.31
CDY26013	Canola	extracellular	85.4	85.09
CDY24120	Canola	extracellular	83.94	83.94
AT1G53070.1	Thale cress	extracellular	76.64	77.21
CDY24118	Canola	extracellular	59.85	58.36
CDY34609	Canola	extracellular	42.7	55.71
CDY34817	Canola	extracellular	51.09	53.64
CDY72663	Canola	extracellular	48.91	50.19
CDY44359	Canola	extracellular	49.63	50.18
CDX97656	Canola	extracellular	50.0	49.64
CDY20121	Canola	extracellular	49.27	48.91
CDY66969	Canola	extracellular	48.54	48.9
CDY21835	Canola	extracellular	48.54	48.19
CDY34610	Canola	cytosol	7.66	44.68
CDX75822	Canola	plastid	15.69	36.75
HORVU2Hr1G043510.1	Barley	extracellular	21.53	22.78
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	23.72	19.06
GSMUA_Achr6P33000_001	Banana	golgi	23.72	18.95
HORVU5Hr1G036880.1	Barley	cytosol	12.04	18.13
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	22.26	17.89
HORVU2Hr1G099010.1	Barley	cytosol	13.5	10.31
HORVU1Hr1G013700.1	Barley	plastid, vacuole	24.45	8.83

Protein Annotations

EnsemblPlants:CDY26012	EnsemblPlantsGene:GSBRNA2T00033549001	Gene3D:2.60.120.200	GO:A0A078GLK2	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:ConA-like_dom_sf	InterPro:L-lectin	InterPro:Legume_lectin_dom	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5
PFAM:PF00139	PIRSF:PIRSF002690	ProteinID:CDY26012	ProteinID:CDY26012.1	SignalP:SignalP-noTM	SUPFAM:SSF49899
UniParc:UPI0004EBC05F	UniProt:A0A078GLK2	MapMan:18.4.1.19	:	:	:

Description

BnaC06g06120DBnaC06g06120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLK2]

Coordinates

chrLK032184:-:206793..207617

Molecular Weight (calculated)

30532.0 Da

IEP (calculated)

8.420

GRAVY (calculated)

-0.232

Length

274 amino acids

Sequence
(BLAST)

001: MQTPCFITLF IAISISQATS AYRFQFKNFG INGSDLFSFH GDAEYGPDAG RMSRSGALAL TQFRIPFSHG RAIYINPITL KPPNNASSVY PFKTSFTFSI
101: TPHNTNPTPG HGFAFLVVPR NQDDAASGLG YLSLVNRTSN GNPNNHLFAV EFDVFQDKSL HDINDNHVGI DINSVDSVTS VKSGYWVMTR NGWLFKDLKL
201: SSGDKYTAWV EYNNNLKVIS VTIGLAHLRK PNRPLIEAKY DLSNVLLEKM YAGFAGSMGR GVETHEVWDW TFQN

Best Arabidopsis Sequence Match ( AT1G53070.1 )
(BLAST)

001: MKIQILCFTT LFLAIFTSQV TTAYKFKFDY FGNGTDPISF HGDAEYGPDT DGKSRSGAIA LTRDNIPFSH GRAIFTTPIT FKPNASALYP FKTSFTFSIT
101: PKTNPNQGHG LAFIVVPSNQ NDAGSGLGYL SLLNRTNNGN PNNHLFAVEF DVFQDKSLGD MNDNHVGIDI NSVDSVVSVK SGYWVMTRSG WLFKDLKLSS
201: GDRYKAWIEY NNNYKVVSVT IGLAHLKKPN RPLIEAKFDL SKVIHEVMYT GFAGSMGRGV ERHEIWDWTF QN

Arabidopsis Description

Lectin-like protein At1g53070 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNN2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.