Factsheet for HORVU5Hr1G036880.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	70.33	37.54
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	69.78	37.24
HORVU2Hr1G099010.1	Barley	cytosol	68.68	34.82
HORVU2Hr1G043510.1	Barley	extracellular	45.6	32.05
CDY34610	Canola	cytosol	6.59	25.53
CDX75822	Canola	plastid	15.93	24.79
GSMUA_Achr6P33000_001	Banana	golgi	39.56	20.99
HORVU1Hr1G013700.1	Barley	plastid, vacuole	68.13	16.34
CDY24118	Canola	extracellular	24.73	16.01
Bra019014.1-P	Field mustard	extracellular	24.73	16.01
AT1G53080.1	Thale cress	extracellular	24.73	15.9
CDY24119	Canola	mitochondrion, plastid	19.23	15.7
AT1G53060.1	Thale cress	cytosol, nucleus, plastid	20.33	15.29
Bra028838.1-P	Field mustard	extracellular	22.53	15.13
CDY66969	Canola	extracellular	22.53	15.07
CDY44359	Canola	extracellular	21.98	14.76
CDY34817	Canola	extracellular	20.33	14.18
AT1G53070.1	Thale cress	extracellular	20.88	13.97
AT5G03350.1	Thale cress	extracellular	20.88	13.87
Bra019012.1-P	Field mustard	extracellular	20.33	13.5
CDY24120	Canola	extracellular	20.33	13.5
CDY26013	Canola	extracellular	20.33	13.45
Bra031794.1-P	Field mustard	extracellular	21.43	13.45
CDY21835	Canola	extracellular	19.78	13.04
CDX97656	Canola	extracellular	19.23	12.68
Bra027257.1-P	Field mustard	extracellular	19.23	12.68
CDY72663	Canola	extracellular	18.13	12.36
Bra019013.1-P	Field mustard	extracellular	18.68	12.32
Bra021101.1-P	Field mustard	extracellular	18.68	12.32
CDY20121	Canola	extracellular	18.68	12.32
AT3G16530.1	Thale cress	extracellular	18.68	12.32
CDY26012	Canola	extracellular	18.13	12.04
AT3G15356.1	Thale cress	extracellular	17.03	11.44
CDY34609	Canola	extracellular	7.69	6.67

Protein Annotations

EnsemblPlants:HORVU5Hr1G036880.1	EnsemblPlantsGene:HORVU5Hr1G036880	Gene3D:2.60.120.200	GO:GO:0003674	GO:GO:0005488	GO:GO:0030246
InterPro:ConA-like_dom_sf	InterPro:Legume_lectin_dom	PANTHER:PTHR27007	PANTHER:PTHR27007:SF47	PFAM:PF00139	SEG:seg
SUPFAM:SSF49899	UniParc:UPI000B474362	UniProt:A0A287QVA8	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:+:263639391..263640358

Molecular Weight (calculated)

19738.7 Da

IEP (calculated)

11.112

GRAVY (calculated)

-0.308

Length

182 amino acids

Sequence
(BLAST)

001: MDLQFGDVNE NHVGVDLGST VSTAAADLGL AGVELTSGQT VYAWIEYSPG KAMDVFVSYS PKRPAVPVLS TPVDLAGYVK EQAFVGFSAS TNRSTEIHAI
101: EWWSFSTPSP PSPSPSEPPP VAPVLAAPPP ASPLNPKLPS APHRRPAQLL PRAPRPIRLF GRMPRRRTRL LMGPWRRRRR AG

Best Arabidopsis Sequence Match ( AT5G03140.1 )
(BLAST)

001: MLKLPPRFFS VYSTLIHILA SFLCSSDVRG DFPATRFDLG TLTLSSLKLL GDAHLNNGTI KLTRELSVPT STAGKALYGK PVKFRHPETK SPASFTTYFS
101: FSVTNLNPSS IGGGLAFVIS PDEDYLGSTG GFLGLTEETG SGSGFVAVEF DTLMDVQFKD VNGNHVGLDL NAVVSAAVAD LGNVDIDLKS GNAVNSWITY
201: DGSGRVLTVY VSYSNLKPKS PILSVPLDLD RYVSDSMFVG FSGSTQGSTE IHSVDWWSFS SSFEESSESP PPMPNSPPPS SPSSSITPSL STVRRKTADP
301: SSSCRNKLCK KSPAAVAGVV TAGAFFLALF AGVIIWVYSK KIKYTRKSES LASEIMKSPR EFTYKELKLA TDCFSSSRVI GNGAFGTVYK GILQDSGEII
401: AIKRCSHISQ GNTEFLSELS LIGTLRHRNL LRLQGYCREK GEILLIYDLM PNGSLDKALY ESPTTLPWPH RRKILLGVAS ALAYLHQECE NQIIHRDVKT
501: SNIMLDANFN PKLGDFGLAR QTEHDKSPDA TAAAGTMGYL APEYLLTGRA TEKTDVFSYG AVVLEVCTGR RPITRPEPEP GLRPGLRSSL VDWVWGLYRE
601: GKLLTAVDER LSEFNPEEMS RVMMVGLACS QPDPVTRPTM RSVVQILVGE ADVPEVPIAK PSSSMSFSTS ELLLTLQDSV SDCNEVLAPI STTSCSSSEH
701: DIFIVGKDRS V

Arabidopsis Description

LECRK82L-type lectin-domain containing receptor kinase VIII.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYX1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.