Factsheet for Bra019014.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24118	Canola	extracellular	98.93	98.93
AT1G53080.1	Thale cress	extracellular	87.9	87.28
Bra031794.1-P	Field mustard	extracellular	68.33	66.21
Bra019012.1-P	Field mustard	extracellular	62.63	64.23
Bra028838.1-P	Field mustard	extracellular	60.5	62.73
Bra027257.1-P	Field mustard	extracellular	61.57	62.68
Bra019013.1-P	Field mustard	extracellular	59.79	60.87
Bra021101.1-P	Field mustard	extracellular	58.36	59.42
HORVU2Hr1G043510.1	Barley	extracellular	25.27	27.41
HORVU5Hr1G036880.1	Barley	cytosol	16.01	24.73
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	27.4	22.58
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	26.69	21.99
GSMUA_Achr6P33000_001	Banana	golgi	24.56	20.12
HORVU2Hr1G099010.1	Barley	cytosol	17.79	13.93
HORVU1Hr1G013700.1	Barley	plastid, vacuole	28.11	10.41

Protein Annotations

MapMan:18.4.1.19	Gene3D:2.60.120.200	EnsemblPlantsGene:Bra019014	EnsemblPlants:Bra019014.1	EnsemblPlants:Bra019014.1-P	InterPro:ConA-like_dom_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0009505
GO:GO:0030246	GO:GO:0030312	InterPro:L-lectin	InterPro:Legume_lectin_dom	UniProt:M4DR71	PFAM:PF00139
PIRSF:PIRSF002690	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000253E804	SEG:seg	:	:	:	:

Description

AT1G53080 (E=4e-135) | legume lectin family protein

Coordinates

chrA06:-:757629..758474

Molecular Weight (calculated)

31453.3 Da

IEP (calculated)

9.205

GRAVY (calculated)

-0.302

Length

281 amino acids

Sequence
(BLAST)

001: MQIQNICFIA LFIAFFSTET ISAIKFNFNH FEGTNLIFIG YAELGPATDG MSRSGALSMT RDNIPFSHGQ GLYTDPIPFK PSNNTSSSVY SFKTSFTFSI
101: TPRKSNPNPG HGLAFIVVPT VNYDQDSTRG FLGLVNKTTN GNPNNHLFAV EFDVFQDKRF GDINDNHVGV NVNSVNSMVS EKAGYWIQTR TGGKKQWLFK
201: EVKLSSGEKY KAWIEYKNNK VSVTLAPAHL KKPKMPMIET HVDLSEVVLE TMYTGFAGSM GRGIERHDIW SWSFENTAKN I

Best Arabidopsis Sequence Match ( AT1G53080.1 )
(BLAST)

001: MQIHKLCIFV LFISLLSSKT ISAVKFNFNR FDGTNLIFIG YAELGPATDG MSRSGALSMT RDNIPFSHGQ GLYTDPIPFK SSNNTSSSVY SFKTSFTFSI
101: TPRRSNPNPG HGIAFIVVPT VAYEYDQDST RGFLGLVNLT TNGNPNNHLF AVEFDVFQDK RFGDINDNHV GVNINSVNSK VSEKAGYWIQ TRTRGKNQWL
201: FKEVKLSSGD NYKAWIEYKN SKVIVWLAPA HLKKPKRPLI ETQVDLSEVV LETMYTGFSG SMGRGVERHD IWSWSFENTA KNN

Arabidopsis Description

Lectin-like protein At1g53080 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNN3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.