Factsheet for Bra021101.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20121	Canola	extracellular	98.55	98.55
Bra027257.1-P	Field mustard	extracellular	88.41	88.41
AT3G15356.1	Thale cress	extracellular	81.16	82.66
AT3G16530.1	Thale cress	extracellular	81.52	81.52
Bra028838.1-P	Field mustard	extracellular	58.33	59.41
Bra019014.1-P	Field mustard	extracellular	59.42	58.36
Bra031794.1-P	Field mustard	extracellular	56.88	54.14
Bra019012.1-P	Field mustard	extracellular	49.28	49.63
Bra019013.1-P	Field mustard	extracellular	47.83	47.83
HORVU2Hr1G043510.1	Barley	extracellular	26.09	27.8
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	26.45	21.41
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	26.09	21.11
GSMUA_Achr6P33000_001	Banana	golgi	25.72	20.7
HORVU5Hr1G036880.1	Barley	cytosol	12.32	18.68
HORVU2Hr1G099010.1	Barley	cytosol	14.49	11.14
HORVU1Hr1G013700.1	Barley	plastid, vacuole	28.26	10.28

Protein Annotations

EnsemblPlants:Bra021101.1	EnsemblPlants:Bra021101.1-P	EnsemblPlantsGene:Bra021101	Gene3D:2.60.120.200	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:ConA-like_dom_sf	InterPro:L-lectin	InterPro:Legume_lectin_dom	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5
PFAM:PF00139	PIRSF:PIRSF002690	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49899	UniParc:UPI0002543F99
UniProt:M4DX55	MapMan:18.4.1.19	:	:	:	:

Description

AT3G16530 (E=1e-124) | legume lectin family protein

Coordinates

chrA01:+:23966251..23967081

Molecular Weight (calculated)

30265.6 Da

IEP (calculated)

9.642

GRAVY (calculated)

-0.345

Length

276 amino acids

Sequence
(BLAST)

001: MQIHKLCFIA LFLAHAAFAV KFNFKTFDGN NLLFLGDAEL GPSSDGVGRT GALSMTRDET PFSHGQGLYI NPIPLKPSND SAPYSFQTSF TFSITPRTNP
101: NSGQGLAFII VPTADNSGAS GGGFLGILNK TNNGKAENNL FSIEFDTFKN KEFQDISGNH VGLNINSMTS NVAANAGYWV QTSVGKRKVW SFKDVNLSSG
201: EKFTAWVEFR KRDNRITVTL APENVKKPKR PLIQGPRELN DVLLQNGYVG FAGAMGRGVE RHDVWSWSFE NDAKNN

Best Arabidopsis Sequence Match ( AT3G16530.1 )
(BLAST)

001: MQIHKLCFLV LFLANAAFAV KFNFDSFDGS NLLFLGDAEL GPSSDGVSRS GALSMTRDEN PFSHGQGLYI NQIPFKPSNT SSPFSFETSF TFSITPRTKP
101: NSGQGFAFII TPEADNSGAS DGGYLGILNK TNDGKPENHI LAIEFDTFQN KEFLDISGNH VGVNINSMTS LVAEKAGYWV QTRVGKRKVW SFKDVNLSSG
201: ERFKAWVEFR NKDSTITVTL APENVKKPKR ALIEAPRVLN EVLLQNMYAG FAGSMGRAVE RHDIWSWSFE NAAKNN

Arabidopsis Description

Lectin-like protein At3g16530 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK72]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.