Factsheet for Bra019012.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24120	Canola	extracellular	95.26	95.26
CDY26013	Canola	extracellular	94.53	94.18
Bra019013.1-P	Field mustard	extracellular	83.58	82.97
AT1G53070.1	Thale cress	extracellular	78.1	78.68
Bra019014.1-P	Field mustard	extracellular	64.23	62.63
Bra031794.1-P	Field mustard	extracellular	60.22	56.9
Bra027257.1-P	Field mustard	extracellular	52.55	52.17
Bra028838.1-P	Field mustard	extracellular	49.63	50.18
Bra021101.1-P	Field mustard	extracellular	49.63	49.28
HORVU2Hr1G043510.1	Barley	extracellular	23.72	25.1
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	25.55	20.53
HORVU5Hr1G036880.1	Barley	cytosol	13.5	20.33
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	24.45	19.65
GSMUA_Achr6P33000_001	Banana	golgi	24.09	19.24
HORVU2Hr1G099010.1	Barley	cytosol	14.96	11.42
HORVU1Hr1G013700.1	Barley	plastid, vacuole	27.01	9.75

Protein Annotations

EnsemblPlants:Bra019012.1	EnsemblPlants:Bra019012.1-P	EnsemblPlantsGene:Bra019012	Gene3D:2.60.120.200	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:ConA-like_dom_sf	InterPro:L-lectin	InterPro:Legume_lectin_dom	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5
PFAM:PF00139	PIRSF:PIRSF002690	SignalP:SignalP-noTM	SUPFAM:SSF49899	UniParc:UPI000253E806	UniProt:M4DR69
MapMan:18.4.1.19	:	:	:	:	:

Description

AT1G53070 (E=1e-125) | legume lectin family protein

Coordinates

chrA06:-:763673..764497

Molecular Weight (calculated)

30566.1 Da

IEP (calculated)

9.638

GRAVY (calculated)

-0.273

Length

274 amino acids

Sequence
(BLAST)

001: MTMQTLRFIT LCIAIFTSQI TSAYRFKFNH FGNGTDLFSF HGDAEYGHNT DGTTRSGSLS LTKDKTPFSH GRAILINPIS FKPPNNASSV YSFKTSFTFS
101: ITPHKTNPTP GHGLAFFVVP SNQHAGSGLG FLSLVNRTSN GNPSNHLFAV EFDVFQDKSF KDINDNHVGI DINSVDSVTS VKSGYWVMTR NGWLFKDLKL
201: SSGDKYAAWI EYNNNLKVIS VTIGLAHLKK PNRPLIEAKY DLSNVLLEKM YAGFAGSMGR GVERHEIWDW TFQN

Best Arabidopsis Sequence Match ( AT1G53070.1 )
(BLAST)

001: MKIQILCFTT LFLAIFTSQV TTAYKFKFDY FGNGTDPISF HGDAEYGPDT DGKSRSGAIA LTRDNIPFSH GRAIFTTPIT FKPNASALYP FKTSFTFSIT
101: PKTNPNQGHG LAFIVVPSNQ NDAGSGLGYL SLLNRTNNGN PNNHLFAVEF DVFQDKSLGD MNDNHVGIDI NSVDSVVSVK SGYWVMTRSG WLFKDLKLSS
201: GDRYKAWIEY NNNYKVVSVT IGLAHLKKPN RPLIEAKFDL SKVIHEVMYT GFAGSMGRGV ERHEIWDWTF QN

Arabidopsis Description

Lectin-like protein At1g53070 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNN2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.