CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019014.1-P	Field mustard	extracellular	98.93	98.93
AT1G53080.1	Thale cress	extracellular	88.97	88.34
CDY34609	Canola	extracellular	49.82	66.67
CDY24119	Canola	mitochondrion, plastid	52.31	65.92
CDY34817	Canola	extracellular	59.79	64.37
CDY24120	Canola	extracellular	61.92	63.5
CDY44359	Canola	extracellular	60.5	62.73
CDX97656	Canola	extracellular	61.57	62.68
CDY66969	Canola	extracellular	60.5	62.5
CDY26013	Canola	extracellular	60.85	62.18
CDY72663	Canola	extracellular	59.07	62.17
CDY26012	Canola	extracellular	58.36	59.85
CDY20121	Canola	extracellular	58.72	59.78
CDY21835	Canola	extracellular	58.72	59.78
CDY34610	Canola	cytosol	9.25	55.32
CDX75822	Canola	plastid	19.93	47.86
HORVU2Hr1G043510.1	Barley	extracellular	25.27	27.41
HORVU5Hr1G036880.1	Barley	cytosol	16.01	24.73
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	27.4	22.58
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	26.69	21.99
GSMUA_Achr6P33000_001	Banana	golgi	24.91	20.41
HORVU2Hr1G099010.1	Barley	cytosol	17.79	13.93
HORVU1Hr1G013700.1	Barley	plastid, vacuole	28.11	10.41

Protein Annotations

MapMan:18.4.1.19	Gene3D:2.60.120.200	GO:A0A078GHL9	UniProt:A0A078GHL9	EnsemblPlants:CDY24118	ProteinID:CDY24118
ProteinID:CDY24118.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0009505	GO:GO:0030246	GO:GO:0030312	EnsemblPlantsGene:GSBRNA2T00024670001	InterPro:L-lectin
InterPro:Legume_lectin_dom	PFAM:PF00139	PIRSF:PIRSF002690	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5	SUPFAM:SSF49899
SignalP:SignalP-noTM	UniParc:UPI0004EF33C3	SEG:seg	:	:	:

Description

BnaA06g01160DBnaA06g01160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHL9]

Coordinates

chrLK032153:-:561918..562763

Molecular Weight (calculated)

31408.2 Da

IEP (calculated)

9.205

GRAVY (calculated)

-0.298

Length

281 amino acids

Sequence
(BLAST)

001: MQIQNICFIA LFISLFSTET ISAIKFNFNH FEGTNLIFIG YAELGPATDG MSRSGALSMT RDNIPFSHGQ GLYTDPIPFK PSNNTSSSVY SFKTSFTFSI
101: TPRKSNPNPG HGLAFIVVPT VNYDQDSTRG FLGLVNKTTN GNPNNHLFAV EFDVFQDKRF GDINDNHVGV NVNSVNSMVS EKAGYWIQTR TGGKKQWLFK
201: EVKLSSGEKY KAWIEYKNSK VSVTLAPAHL KKPKMPMIET HVDLSEVVLE TMYTGFAGSM GRGIERHDIW SWSFENTAKN I

Best Arabidopsis Sequence Match ( AT1G53080.1 )
(BLAST)

001: MQIHKLCIFV LFISLLSSKT ISAVKFNFNR FDGTNLIFIG YAELGPATDG MSRSGALSMT RDNIPFSHGQ GLYTDPIPFK SSNNTSSSVY SFKTSFTFSI
101: TPRRSNPNPG HGIAFIVVPT VAYEYDQDST RGFLGLVNLT TNGNPNNHLF AVEFDVFQDK RFGDINDNHV GVNINSVNSK VSEKAGYWIQ TRTRGKNQWL
201: FKEVKLSSGD NYKAWIEYKN SKVIVWLAPA HLKKPKRPLI ETQVDLSEVV LETMYTGFSG SMGRGVERHD IWSWSFENTA KNN

Arabidopsis Description

Lectin-like protein At1g53080 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNN3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.