Factsheet for Bra037541.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18566	Canola	nucleus	92.91	95.45
Bra035499.1-P	Field mustard	nucleus	70.89	65.98
AT3G19040.2	Thale cress	nucleus	65.61	64.51
Bra018905.1-P	Field mustard	nucleus	4.2	49.66
KRH39697	Soybean	nucleus	50.23	46.83
VIT_12s0028g03940.t01	Wine grape	nucleus	50.4	46.42
Solyc07g006820.2.1	Tomato	nucleus	47.96	46.35
KRH62676	Soybean	nucleus	49.38	46.06
GSMUA_Achr2P11610_001	Banana	nucleus	44.15	42.44

Protein Annotations

Gene3D:1.20.920.10	MapMan:15.3.4.4.4	MapMan:15.3.5.3.2	MapMan:18.4.7.3	Gene3D:3.10.20.90	EnsemblPlantsGene:Bra037541
EnsemblPlants:Bra037541.1	EnsemblPlants:Bra037541.1-P	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	InterPro:Bromodomain_CS	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626	InterPro:IPR001487	InterPro:IPR036427
UniProt:M4F8X9	PFAM:PF00240	PFAM:PF00439	PFAM:PF09247	PFAM:PF12157	PRINTS:PR00503
ScanProsite:PS00633	PFscan:PS50014	PFscan:PS50053	PANTHER:PTHR13900	SMART:SM00213	SMART:SM00297
SUPFAM:SSF47055	SUPFAM:SSF47370	SUPFAM:SSF54236	InterPro:TAFII-230_TBP-bd_sf	InterPro:TAF_II_230-bd	InterPro:TFIID_sub1_DUF3591
UniParc:UPI0002544E61	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:	:

Description

AT1G32750 (E=0.0) HAF01, HAF1, HAC13, GTD1, TAF1 | HAF01; DNA binding / histone acetyltransferase

Coordinates

chrA01:+:21751670..21759590

Molecular Weight (calculated)

200139.0 Da

IEP (calculated)

5.932

GRAVY (calculated)

-0.786

Length

1762 amino acids

Sequence
(BLAST)

0001: MAERNEGSSE DDEEYADRSR GLEFIFGNVD NSGDLDADYL NEDAKEHLSA LASSLPDIML MASSGCTTSD PAEQDYNEKA ADAVDYGDID EEYDGPEVQV
0101: ATEEDHLLPE REYFSSAAAS GSLYSKASVF DDDDYDEEEE QEVEHMPFEE TFDSEDSESV VLKEDNALEY EEEASILGNE ERLDTNEKNA TSLPTLYVED
0201: GMVVLQFSEI FAIHKPPQKR AKRENRYITY RDRYKSMELV EDDEGLLLKS HGRVDTHVKQ ADLIQLDVPL PKRGDLQLVK AGTFGSIIPE SREFTKPGRD
0301: SCTMGELLKQ DLQDDKSSLC QSQSSMEVFP LDQQEWENRI IWENSPGVSG NSCESFESGI ESESLLIQGT NSETEQESLN VVNSGEQAQA ENNKHVSFFV
0401: SGLESLGSHT TSESTNKSRR HPQLLRLESQ WDEDHRSEND NTGGKNLKQL KRDTVGRFSR LGLQERDMGD DPWLDSIIWE SDKELTRSKL IFDLQDEQMV
0501: FEIPDNGESK DLQLHAGSMI LSRSSKPKDK RFQEGCGSNY GFQFNISNDK FYMNGKSCLQ LQANANQFGV HSLRVLHSAS AIKLQTMKNK LSNKDIANFH
0601: RPKALWYPHN NELAIKQQGK LPTQGFMQIV VKSLGGKGIR IHVGIEESVS SLKAKASRKL DFKETEAVKI FYMGKELEDE KSLAEQNVHP NSLVHILRTK
0701: VHLLPWAQKL PGEHKSLRPP GAFKKKSDLS TKDGHVFLME YCEERPLMLS NAGMGANLCT YYQKSSPADQ HGNLLCDKND TLGNVMILEP GEKSPFLGEI
0801: HGGCSQSSIE TNMYKAPVFP HKLQSTDYLL VRSSKGKLSL RRIDKTFAVG QQEPRMEVMS PASKNLQTYL VNRMLVYVDR EFKHRRRIPA DELSFLFSSL
0901: SDAVVKKTMR IHGIFLERDK NGHIFWYKKH RFDKIPHEIE LKNLVAPEDV CSYESMLAGL YRLKHLGITQ FTLPASISTA LAQLPDEAIA LAAASHIERE
1001: LQITPWNLSS NYVACTTQDR ANIERLEITG VGDPSGRGLG FSYVRAAPKV PAAAGRMKKK EAACCGAPTV TGTDADLRRL SREAAREVLR KFNVPDEKMA
1101: KQNRWHLIAM IRKLSSEQAA SGVLKVDPTT IGKYARGQRM SFLQLQQQAR EKCQEIWDRQ LLSLSACDDD ESESENDMDS FVGDLENLLD AEEWEESNTS
1201: KNDKFDGVNG FKMRRRPYQV VTDEDVEDEA AEYAELRRLL MKDDEKRNMN AEFVRKDSVS AKKHIASRPD ASFLVTKSTF SKNTANVSVF KERKPVRDNF
1301: FCGACGQPGH MKTNKHCPKY RSTTEPQPEG IYVKKSSGTP SSSDLSGQVK LEPTKSKKTA PKSQTKVSVD EAPKGDNPTS KTGGLTLRFK CAIPAGGMLD
1401: KPGSETPRRS MEEPDRPLPS LMPAFIRERG ESESHRPSVS GQSFSNTERN QPASSRLTMS ITQPSLRMDK ELLIQRPNER EQPQKKLVIK RSKVITDSLE
1501: LSSQFESRKT MRMAEPEGFQ SQQRFRLSEN SLHRGPKEGR VWQEEREIST ERHREARVRR DYADMTEFEK ANEIGSEREE KERQKKLQPE VIERYLEGYP
1601: RRRNDKKLLE RVQKVRSQYV SDFERNVAQY APQPKRRKKG EVGLANILEV IVDTLRAKEV NVSYLFLKPV SKKEAPDYHD VVQRPMDLST IRDKVRRVEY
1701: RDREQFRNDV WQIKYNAHLY NDGRNPMIPP LADELLVKCD GLLERYRDEL TEAEKGIVNL ID

Best Arabidopsis Sequence Match ( AT1G32750.1 )
(BLAST)

0001: MAESNGKGSH NETSSDDDDE YEDNSRGFNL GFIFGNVDNS GDLDADYLDE DAKEHLSALA DKLGSSLPDI NLLAKSERTA SDPAEQDYDR KAEDAVDYED
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND

Arabidopsis Description

TAF1Transcription initiation factor TFIID subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LRK9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.