Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62676 | Soybean | nucleus | 92.38 | 92.43 |
| Os06t0645700-01 | Rice | cytosol, nucleus | 2.38 | 63.38 |
| VIT_12s0028g03940.t01 | Wine grape | nucleus | 62.54 | 61.79 |
| Solyc07g006820.2.1 | Tomato | nucleus | 54.76 | 56.77 |
| CDX84083 | Canola | nucleus | 6.61 | 52.52 |
| CDY44660 | Canola | nucleus | 50.63 | 51.93 |
| GSMUA_Achr2P11610_001 | Banana | nucleus | 50.16 | 51.72 |
| AT1G32750.1 | Thale cress | nucleus | 52.49 | 51.69 |
| Bra035499.1-P | Field mustard | nucleus | 51.59 | 51.51 |
| CDY18566 | Canola | nucleus | 46.45 | 51.2 |
| CDX95471 | Canola | nucleus | 46.3 | 51.05 |
| Bra037541.1-P | Field mustard | nucleus | 46.83 | 50.23 |
| EER90111 | Sorghum | nucleus | 46.98 | 49.22 |
| Os06t0645800-01 | Rice | nucleus | 22.91 | 49.2 |
| Zm00001d046579_P019 | Maize | nucleus | 46.56 | 48.7 |
| TraesCS7A01G514800.1 | Wheat | nucleus | 46.08 | 48.5 |
| TraesCS7D01G505200.1 | Wheat | nucleus | 46.08 | 48.5 |
| TraesCS7B01G431500.1 | Wheat | nucleus | 45.77 | 48.16 |
| TraesCS7D01G505400.1 | Wheat | nucleus | 44.23 | 47.45 |
| TraesCS7B01G431700.2 | Wheat | nucleus | 44.07 | 47.28 |
| HORVU7Hr1G115120.1 | Barley | plastid | 39.15 | 46.92 |
| AT3G19040.2 | Thale cress | nucleus | 44.44 | 46.88 |
| TraesCS7A01G515000.1 | Wheat | plastid | 42.75 | 45.34 |
| Os06t0645901-00 | Rice | cytosol, nucleus | 6.51 | 36.28 |
Protein Annotations
| Gene3D:1.20.920.10 | EntrezGene:100780733 | MapMan:15.3.4.4.4 | MapMan:15.3.5.3.2 | MapMan:18.4.7.3 | Gene3D:3.10.20.90 |
| EMBL:ACUP02005954 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G215000 |
| GO:GO:0001075 | GO:GO:0001129 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005669 | GO:GO:0006139 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016573 |
| GO:GO:0016740 | GO:GO:0017025 | GO:GO:0019538 | GO:GO:0043565 | GO:GO:0045944 | GO:GO:0051123 |
| UniProt:I1L578 | InterPro:IPR000626 | InterPro:IPR001487 | InterPro:IPR036427 | EnsemblPlants:KRH39697 | ProteinID:KRH39697 |
| ProteinID:KRH39697.1 | PFAM:PF00240 | PFAM:PF00439 | PFAM:PF09247 | PFAM:PF12157 | PRINTS:PR00503 |
| ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS50053 | SMART:SM00213 | SMART:SM00297 | SUPFAM:SSF47055 |
| SUPFAM:SSF47370 | SUPFAM:SSF54236 | InterPro:TAFII-230_TBP-bd_sf | InterPro:TAF_II_230-bd | InterPro:TFIID_sub1_DUF3591 | UniParc:UPI00029596B2 |
| InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:43810685..43837372
Molecular Weight (calculated)
214571.0 Da
IEP (calculated)
6.081
GRAVY (calculated)
-0.848
Length
1890 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGYDSDSPSQ DGRDEDDEEE YEDSGKGNRF LGFMFGNVDN SGDLDVDYLD EDAKEHLSAL ADKLGPSLTD IDLSGKSPQT PPDVVEQDCD VKAEDAVDYE
0101: DIDEEYDGPE TEAANEEDYL LPKKEFFSSE ASVCLESKAS VFDDENYDEE SEKEQDFVND DSKVYNIPLA GEQEESFVDA SKEESSLEHE LHVDSPQTEE
0201: LDADVQKLEE DGPEVQKRSM AMPLPVLCVE DGVAILRFSE IFGIHEPLRK GEKREHRHSI PRDIYKSFDL TDDFVEEDEE EFLKGFSQSL SLSKQVCVVH
0301: NDVSESNDVD LEFPKFGFLH ADASVDRKDD QQSKDSCHSA EPMKGDFVED HFWKDHPFML ANFYPLDQQD WEDKILWGNS PVPSYNNVES CEISGPELGA
0401: SGGSEIEIES GIHNIQMEPQ KVLEDKNHNV LMRSSPVKLE PFGSRDSSGA KTNLISRSLF HPQLLRLESR SEVDSSSLAD GRDAEISEHN QSGQVKRFTK
0501: VISQNRDMME GSWLDKIIWE ELDQPSVKPK LIFDLQDDQM HFEVLDTKDG THLCLHAGAM ILTHSLKLSS GDSSELPGHG SQYGWRYVAN DKHYSNRKTS
0601: QQLKSNSKKR SAHGVKVFHS QPALKLQTMK LKLSNKDIAN FHRPKALWYP HDNEVAVKEQ GKLPTQGPMK IIIKSLGGKG SKLHVDVEET LSSVKAKASK
0701: KLDFKVSETV KIFYLGRELE DHKSLAAQNV QPNSLLHLVR TKIHLWPKAQ RVPGENKSLR PPGAFKKKSD LSVKDGHVFL MEYCEERPLL LSNVGMGARL
0801: CTYYQKCSPD DQSGSLLRNT DSRLGHIISL DPADKFPFLG DLKPGCSQSS LETNMYRAPI FPHKVPLTDY LLVRSSKGKL SLRRIDKINV VGQQEPLMEV
0901: LSPGSKNLQT YMMNRLLVHM CREFQAAEKR HLPPYIGVDE FLSQFPYQSE ASFRKKIKEY ANLQRGTNGQ SILVKKRNFR IWSEDELRKM VTPELVCAYE
1001: SMQASLYRLK HLGITETHPT NISSAMSRLP DEAIALAAAS HIERELQITP WNLSCNFVAC TSQGKENIER MEITGVGDPS GRGMGFSYAR APPKAPVSSA
1101: MVKKKAAANR GGSTVTGTDA DLRRLSMDAA REVLLKFNVP EEVIAKQTRW HRIAMIRKLS SEQATSGVKV DPTTISKYAR GQRMSFLQLQ QQTREKCQEI
1201: WDRQVQSLSA VNGDENESDS EGNSDLDSFA GDLENLLDAE ECEEGEEGTN DLKRDKGDGV KGLKMRRRPT LAQAEEEIED EAAEAAELCR LLMDDYEADR
1301: KKKKKAKVMV GEARLVPKMQ SKFSFDNAEQ VKQITNTLQL DGTNHLKEDA ITDLREEENV PAKKSKSLKV NKAKKNDIMP ISIPNKKIKL NMGEGIKNQV
1401: FKEKKPSRET FVCGACGKAG HMRTNKNCPK YGEDLETQLE SADMEKSSGK SSFVDPSSLS QHKAPSKKSM SKSATKVAPV DNSTKIPLKF KCSSTEKSSD
1501: KPAVETLQSS DKPVTSDSET AKSAKVNKII IPKKVKPDDT LAESRKHAIV IRPPTDSGRG QVDSHKFPIK IRPPTEIDRE QSHKKIVIKR TKEVIDLELD
1601: SPGGNTGLQH RKTKRIVELS NFEKQKKQET VYGTEGFKKW NSKEDRRWRE EQEKWRNDAR LREEDRARRH HKEEIRMLKE QERLDEIKRF EEDIRREREE
1701: EERQKAKKKK KKKKPELRDE YLDDPRARRH DKRMPERDRS GKRRSVTELG KIGADYMPPT KRRRGGGGEV GLANILESVV DTIVKDRYDL SYLFLKPVSK
1801: KEAPDYLDVI ERPMDLSRIR ERVRNMEYKS REDFRHDMWQ ITFNAHKYND GRNPGIPPLA DMLLEYCDYL LNENDDSLTE AEAGIEIRDF
0101: DIDEEYDGPE TEAANEEDYL LPKKEFFSSE ASVCLESKAS VFDDENYDEE SEKEQDFVND DSKVYNIPLA GEQEESFVDA SKEESSLEHE LHVDSPQTEE
0201: LDADVQKLEE DGPEVQKRSM AMPLPVLCVE DGVAILRFSE IFGIHEPLRK GEKREHRHSI PRDIYKSFDL TDDFVEEDEE EFLKGFSQSL SLSKQVCVVH
0301: NDVSESNDVD LEFPKFGFLH ADASVDRKDD QQSKDSCHSA EPMKGDFVED HFWKDHPFML ANFYPLDQQD WEDKILWGNS PVPSYNNVES CEISGPELGA
0401: SGGSEIEIES GIHNIQMEPQ KVLEDKNHNV LMRSSPVKLE PFGSRDSSGA KTNLISRSLF HPQLLRLESR SEVDSSSLAD GRDAEISEHN QSGQVKRFTK
0501: VISQNRDMME GSWLDKIIWE ELDQPSVKPK LIFDLQDDQM HFEVLDTKDG THLCLHAGAM ILTHSLKLSS GDSSELPGHG SQYGWRYVAN DKHYSNRKTS
0601: QQLKSNSKKR SAHGVKVFHS QPALKLQTMK LKLSNKDIAN FHRPKALWYP HDNEVAVKEQ GKLPTQGPMK IIIKSLGGKG SKLHVDVEET LSSVKAKASK
0701: KLDFKVSETV KIFYLGRELE DHKSLAAQNV QPNSLLHLVR TKIHLWPKAQ RVPGENKSLR PPGAFKKKSD LSVKDGHVFL MEYCEERPLL LSNVGMGARL
0801: CTYYQKCSPD DQSGSLLRNT DSRLGHIISL DPADKFPFLG DLKPGCSQSS LETNMYRAPI FPHKVPLTDY LLVRSSKGKL SLRRIDKINV VGQQEPLMEV
0901: LSPGSKNLQT YMMNRLLVHM CREFQAAEKR HLPPYIGVDE FLSQFPYQSE ASFRKKIKEY ANLQRGTNGQ SILVKKRNFR IWSEDELRKM VTPELVCAYE
1001: SMQASLYRLK HLGITETHPT NISSAMSRLP DEAIALAAAS HIERELQITP WNLSCNFVAC TSQGKENIER MEITGVGDPS GRGMGFSYAR APPKAPVSSA
1101: MVKKKAAANR GGSTVTGTDA DLRRLSMDAA REVLLKFNVP EEVIAKQTRW HRIAMIRKLS SEQATSGVKV DPTTISKYAR GQRMSFLQLQ QQTREKCQEI
1201: WDRQVQSLSA VNGDENESDS EGNSDLDSFA GDLENLLDAE ECEEGEEGTN DLKRDKGDGV KGLKMRRRPT LAQAEEEIED EAAEAAELCR LLMDDYEADR
1301: KKKKKAKVMV GEARLVPKMQ SKFSFDNAEQ VKQITNTLQL DGTNHLKEDA ITDLREEENV PAKKSKSLKV NKAKKNDIMP ISIPNKKIKL NMGEGIKNQV
1401: FKEKKPSRET FVCGACGKAG HMRTNKNCPK YGEDLETQLE SADMEKSSGK SSFVDPSSLS QHKAPSKKSM SKSATKVAPV DNSTKIPLKF KCSSTEKSSD
1501: KPAVETLQSS DKPVTSDSET AKSAKVNKII IPKKVKPDDT LAESRKHAIV IRPPTDSGRG QVDSHKFPIK IRPPTEIDRE QSHKKIVIKR TKEVIDLELD
1601: SPGGNTGLQH RKTKRIVELS NFEKQKKQET VYGTEGFKKW NSKEDRRWRE EQEKWRNDAR LREEDRARRH HKEEIRMLKE QERLDEIKRF EEDIRREREE
1701: EERQKAKKKK KKKKPELRDE YLDDPRARRH DKRMPERDRS GKRRSVTELG KIGADYMPPT KRRRGGGGEV GLANILESVV DTIVKDRYDL SYLFLKPVSK
1801: KEAPDYLDVI ERPMDLSRIR ERVRNMEYKS REDFRHDMWQ ITFNAHKYND GRNPGIPPLA DMLLEYCDYL LNENDDSLTE AEAGIEIRDF
0001: MAESNGKGSH NETSSDDDDE YEDNSRGFNL GFIFGNVDNS GDLDADYLDE DAKEHLSALA DKLGSSLPDI NLLAKSERTA SDPAEQDYDR KAEDAVDYED
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
Arabidopsis Description
TAF1Transcription initiation factor TFIID subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LRK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.