Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18566 | Canola | nucleus | 96.15 | 96.09 |
| CDY44660 | Canola | nucleus | 73.98 | 68.8 |
| CDY22837 | Canola | cytosol | 2.98 | 68.0 |
| AT3G19040.2 | Thale cress | nucleus | 64.94 | 62.11 |
| CDY49818 | Canola | nucleus | 3.79 | 58.04 |
| CDX84083 | Canola | nucleus | 7.99 | 57.56 |
| KRH39697 | Soybean | nucleus | 51.05 | 46.3 |
| Solyc07g006820.2.1 | Tomato | nucleus | 48.95 | 46.02 |
| VIT_12s0028g03940.t01 | Wine grape | nucleus | 51.05 | 45.74 |
| KRH62676 | Soybean | nucleus | 50.41 | 45.74 |
| GSMUA_Achr2P11610_001 | Banana | nucleus | 45.39 | 42.44 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.3.4.4.4 | MapMan:15.3.5.3.2 | MapMan:18.4.7.3 | Gene3D:3.10.20.90 | InterPro:Bromodomain |
| InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | EnsemblPlants:CDX95471 | ProteinID:CDX95471 | ProteinID:CDX95471.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00101246001 | InterPro:IPR000626 | InterPro:IPR001487 |
| InterPro:IPR036427 | PFAM:PF00240 | PFAM:PF00439 | PFAM:PF09247 | PFAM:PF12157 | PRINTS:PR00503 |
| ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS50053 | PANTHER:PTHR13900 | SMART:SM00213 | SMART:SM00297 |
| SUPFAM:SSF47055 | SUPFAM:SSF47370 | SUPFAM:SSF54236 | InterPro:TAFII-230_TBP-bd_sf | InterPro:TAF_II_230-bd | InterPro:TFIID_sub1_DUF3591 |
| UniParc:UPI0004EDEA80 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | SEG:seg | : | : |
Description
BnaC01g33630D
Coordinates
chrLK031889:+:441657..449523
Molecular Weight (calculated)
194500.0 Da
IEP (calculated)
5.821
GRAVY (calculated)
-0.774
Length
1714 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEHNEGSSE DNEEYADRSR GLEFIFGNVD NSGDLDADYL NEDAKEHLSA LASSLPDIML LASSGCTTSD PAEQDYNEKA ADAVDYGDID EEYDGPEVQV
0101: VTEEDHLLPK REYFSSAAAS GSLYSKASVF DDDDYDEEEE QEVEHMPFEE TFDSEDSESV VLKEENALEF EEEASMLGNE ERLDTNEKSA TSLPTLYVED
0201: GMVVLQFSEI FAIHKPPQKR AKRENRYITY RDRYKSMELV EDDEGLLLKS HGRVGTHVKQ ADLIQLDVPL PIRGDLQLPG RDSCTTGELL KQDLEDDKSS
0301: LCQSQSSMEV FPLDQHEWEN RIIWENSPGV GGNSCESFES EIESESLLIQ GTNSETEQES LNVVNSGEQA QAENNKRVSF FVSALESLGS HTTSESTNKS
0401: RRHPQLLRLE SQWDEDHPSE NDNSGGKNLK QLKGDTLGRF SRFGLQERDM GDDAWLDSII WESDKELSRS KLIFDLQDEQ MVFEIPDNAE SKDLQLHAGS
0501: MILSRSSKPK DERFQEGCGS NYGCQFNISN DKFYMNGKSC QQLQANANQF GVHSLRVLHS ASAIRLQTMK NKLSNKDLAN FHRPKALWYP HDNELAIKQQ
0601: GKLPTQGSMH IVVKSLGGKG SRIHVGIEES VSSLKAKASR KLDFKETEAV KIFYMGKELE DGKSLAEQNV HPNSLVHILR TKVHLLPWAQ KLPGEHKSLR
0701: PPGAFKKKSD LSTKDGHVFL MEYCEERPLM LSNAGMGANL CTYYQKSSPA DQHGNLLCDK KDTLGNVMIL EPGEKSPFLG EIQGGCSQSS IETNMYKAPV
0801: FPHKLQSTDY LLVRSSKGKL SLRRIDKTFA VGQQEPRMEV MSPASKNLQT YLVNRMLVYV DREFKHRRRI PADELSFLFS SLSDAVVKKT MRIHGIFLER
0901: DKNGHIFWYK KHRFDKIPHE IELKNLVAPE DVCSYESMLA GLYRLKHLGI TQFTLPASIS TALAHLPDEA IALAAASHIE RELQITPWNL SSNFVACTTQ
1001: DRANIERLEI TGVGDPSGRG LGFSYVRAAP KVPAAAGSMK KKEAACCGAP TVTGTDADLR RLSREAAREV LLKFNVPDEK MAKQNRWHLI AMIRKLSSEQ
1101: AASGVLKVDP TTIGKYARGQ RMSFLQLQQQ AREKCQEIWD RQLLSLSACD DDESESENDM DSFVGDLENL LDAEEWEESN TSKNDKLDGV NGFKMRRRPY
1201: QVVTDEDVED EAAEYAELRR LLMKDDEKRN MNAEFVRKDS VSAKKHIATR PDASFLVTKS TFKNTRNVSV FKERKPVRDN FFCGACGQPG HMKTNKHCPK
1301: YRATTEPQPE GIYVKKSSET PSSSDLSGQV KLEPIKSKKT APKSPTKVSV DEAPKGDNPT SKTGGLTLRF KCAIPAGGRE RGESESHRPS VSGQSFSNTE
1401: RNQAASSRLT MSITQPSLRM DKELVIQRPN EREQPQKKLV IKRSKVITDS LELTSQFESR KTMRMAEPEG FQSQQRFRLS ENSLHRGPKE GRVWQEEREI
1501: STERHREARV RRDYDDMTKF EKASEIGSER EEKERQKKLQ PEVIERYLEG YPRRRNDRKL LERVQKVRSQ YDSDFEWNVA EYAPQPKRRK KGEVGLANIL
1601: EVIVDTLRAK EVNVSYLFLK PVSKKEAPDY HDVVQRPMDL SIIRDKVRRV EYRDRAQFRN DVWQIKYNAH IYNDGRNPMI PPLADELLVK CDGLLDRYRD
1701: ELTEAEKGIV NHID
0101: VTEEDHLLPK REYFSSAAAS GSLYSKASVF DDDDYDEEEE QEVEHMPFEE TFDSEDSESV VLKEENALEF EEEASMLGNE ERLDTNEKSA TSLPTLYVED
0201: GMVVLQFSEI FAIHKPPQKR AKRENRYITY RDRYKSMELV EDDEGLLLKS HGRVGTHVKQ ADLIQLDVPL PIRGDLQLPG RDSCTTGELL KQDLEDDKSS
0301: LCQSQSSMEV FPLDQHEWEN RIIWENSPGV GGNSCESFES EIESESLLIQ GTNSETEQES LNVVNSGEQA QAENNKRVSF FVSALESLGS HTTSESTNKS
0401: RRHPQLLRLE SQWDEDHPSE NDNSGGKNLK QLKGDTLGRF SRFGLQERDM GDDAWLDSII WESDKELSRS KLIFDLQDEQ MVFEIPDNAE SKDLQLHAGS
0501: MILSRSSKPK DERFQEGCGS NYGCQFNISN DKFYMNGKSC QQLQANANQF GVHSLRVLHS ASAIRLQTMK NKLSNKDLAN FHRPKALWYP HDNELAIKQQ
0601: GKLPTQGSMH IVVKSLGGKG SRIHVGIEES VSSLKAKASR KLDFKETEAV KIFYMGKELE DGKSLAEQNV HPNSLVHILR TKVHLLPWAQ KLPGEHKSLR
0701: PPGAFKKKSD LSTKDGHVFL MEYCEERPLM LSNAGMGANL CTYYQKSSPA DQHGNLLCDK KDTLGNVMIL EPGEKSPFLG EIQGGCSQSS IETNMYKAPV
0801: FPHKLQSTDY LLVRSSKGKL SLRRIDKTFA VGQQEPRMEV MSPASKNLQT YLVNRMLVYV DREFKHRRRI PADELSFLFS SLSDAVVKKT MRIHGIFLER
0901: DKNGHIFWYK KHRFDKIPHE IELKNLVAPE DVCSYESMLA GLYRLKHLGI TQFTLPASIS TALAHLPDEA IALAAASHIE RELQITPWNL SSNFVACTTQ
1001: DRANIERLEI TGVGDPSGRG LGFSYVRAAP KVPAAAGSMK KKEAACCGAP TVTGTDADLR RLSREAAREV LLKFNVPDEK MAKQNRWHLI AMIRKLSSEQ
1101: AASGVLKVDP TTIGKYARGQ RMSFLQLQQQ AREKCQEIWD RQLLSLSACD DDESESENDM DSFVGDLENL LDAEEWEESN TSKNDKLDGV NGFKMRRRPY
1201: QVVTDEDVED EAAEYAELRR LLMKDDEKRN MNAEFVRKDS VSAKKHIATR PDASFLVTKS TFKNTRNVSV FKERKPVRDN FFCGACGQPG HMKTNKHCPK
1301: YRATTEPQPE GIYVKKSSET PSSSDLSGQV KLEPIKSKKT APKSPTKVSV DEAPKGDNPT SKTGGLTLRF KCAIPAGGRE RGESESHRPS VSGQSFSNTE
1401: RNQAASSRLT MSITQPSLRM DKELVIQRPN EREQPQKKLV IKRSKVITDS LELTSQFESR KTMRMAEPEG FQSQQRFRLS ENSLHRGPKE GRVWQEEREI
1501: STERHREARV RRDYDDMTKF EKASEIGSER EEKERQKKLQ PEVIERYLEG YPRRRNDRKL LERVQKVRSQ YDSDFEWNVA EYAPQPKRRK KGEVGLANIL
1601: EVIVDTLRAK EVNVSYLFLK PVSKKEAPDY HDVVQRPMDL SIIRDKVRRV EYRDRAQFRN DVWQIKYNAH IYNDGRNPMI PPLADELLVK CDGLLDRYRD
1701: ELTEAEKGIV NHID
0001: MAESNGKGSH NETSSDDDDE YEDNSRGFNL GFIFGNVDNS GDLDADYLDE DAKEHLSALA DKLGSSLPDI NLLAKSERTA SDPAEQDYDR KAEDAVDYED
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
Arabidopsis Description
TAF1Transcription initiation factor TFIID subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LRK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.