Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0645700-01 | Rice | cytosol, nucleus | 62.67 | 66.2 |
| CDY49818 | Canola | nucleus | 86.67 | 58.04 |
| Bra018905.1-P | Field mustard | nucleus | 100.0 | 50.34 |
| CDY44660 | Canola | nucleus | 98.67 | 4.02 |
| CDY18566 | Canola | nucleus | 73.33 | 3.21 |
| CDX95471 | Canola | nucleus | 68.0 | 2.98 |
| EER90111 | Sorghum | nucleus | 66.67 | 2.77 |
| TraesCS7B01G431700.2 | Wheat | nucleus | 64.0 | 2.72 |
| Zm00001d046579_P019 | Maize | nucleus | 64.0 | 2.66 |
| TraesCS7D01G505400.1 | Wheat | nucleus | 61.33 | 2.61 |
| TraesCS7D01G505200.1 | Wheat | nucleus | 57.33 | 2.39 |
| TraesCS7A01G514800.1 | Wheat | nucleus | 57.33 | 2.39 |
| TraesCS7B01G431500.1 | Wheat | nucleus | 57.33 | 2.39 |
| TraesCS7A01G515000.1 | Wheat | plastid | 45.33 | 1.91 |
| Os06t0645800-01 | Rice | nucleus | 0.0 | 0.0 |
| Os06t0645901-00 | Rice | cytosol, nucleus | 0.0 | 0.0 |
| HORVU7Hr1G115120.1 | Barley | plastid | 0.0 | 0.0 |
| CDX84083 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY22837 | EnsemblPlantsGene:GSBRNA2T00021185001 | Gene3D:1.20.920.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:IPR001487 | InterPro:IPR036427 | ncoils:Coil | PANTHER:PTHR13900 |
| PFAM:PF00439 | PFscan:PS50014 | ProteinID:CDY22837 | ProteinID:CDY22837.1 | SUPFAM:SSF47370 | UniParc:UPI0004EE0C5E |
| UniProt:A0A078GCQ7 | MapMan:35.1 | : | : | : | : |
Description
BnaA06g02400DBnaA06g02400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCQ7]
Coordinates
chrLK032136:-:421180..421407
Molecular Weight (calculated)
8930.5 Da
IEP (calculated)
4.778
GRAVY (calculated)
-0.920
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MDLSTIRDKV RKIEYRNREQ FRHDVWQIQL NAHLYNNNGR NPGIQPLADQ LLEICDYLLE DYGDQLAEAE KGIDR
0001: MICRVDYGSN DEEYDGPELQ VVTEEDHLLP KREYLSAAFA LSGLNSRASV FDDEDYDEQG GQEKEHVPVE KSFDSEEREP VVLKEEKPVK HEKEASILGN
0101: KNQMDTGDVQ EELVVGLSEA TLDEKRVTPL PTLYLEDDGM VILQFSEIFA IQEPQKKRQK REIRCITYRD KYISMDISEL IEDDEEVLLK SHGRIDTHGK
0201: KTDQIQLDVP LPIRERSQLV KSGIVRDTTS ESREFTKLGR DSCIMGELLK QDLKDDNSSL CQSQLTMEVF PLDQQEWEHL ILWEISPQFS ANCCEGFKSG
0301: LESAGIMVQV RASNSVTEQE SLNVMNSGGQ TQGDNNNMLE PFFVNPLESF GSRGSQSTNE STNKSRHHPQ LLRLESQWDE DHYRENGDAG RENLKQLNSD
0401: ARGRLSGLAL QDRDMWDESW LDSIIWESDK DLSRSKLIFD LQDEQMIFEV PNNKERKYLQ LHAGSRIVSR SSKSKDGSFQ EGCGSNSGWQ FNISNDKFYM
0501: NGKSAQKLQG NAKKSTVHSL RVFHSAPAIK LQTMKIKLSN KERANFHRPK ALWYPHDNEL AIKQQKILPT QGSMTIVVKS LGGKGSLLTV GREESVSSLK
0601: AKASRKLDFK ETEAVKMFYM GKELEDEKSL AEQNVQPNSL VHLLRTKVHL WPWAQKLPGE NKSLRPPGAF KKKSDLSNQD GHVFLMEYCE ERPLMLSNAG
0701: MGANLCTYYQ KSSPEDQHGN LLRNQSDTLG SVIILEHGNK SPFLGEVHGG CSQSSVETNM YKAPVFPHRL QSTDYLLVRS AKGKLSLRRI NKIVAVGQQE
0801: PRMEIMSPAS KNLHAYLVNR MMAYVYREFK HRDRIAADEL SFSFSNISDA TVRKYMQVCS DLERDANGKA CWSKKRKFDK IPLGLNTLVA PEDVCSYESM
0901: LAGLFRLKHL GITRFTLPAS ISTALAQLPD ERIAAASHIA RELQITPWNL SSSFVTCATQ GRENIERLEI TGVGDPSGRG LGFSYVRVAP KSSAASEHKK
1001: KKAAACRGVP TVTGTDADPR RLSMEAAREV LLKFNVPDEI IAKQTQRHRT AMIRKISSEQ AASGGKVGPT TVGMFSRSQR MSFLQLQQQA REMCHEIWDR
1101: QRLSLSACDD DGNESENEAN SDLDSFVGDL EDLLDAEDGG EGEESNKSMN EKLDGVKGLK MRRWPSQVEK DEEIEDEAAE YVELCRLLMQ DENDKKKKKL
1201: KDVGEGIGSF PPPRSNFEPF IDKKYIATEP DASFLIVNES TVKHTKNVDK ATSKSPKDKQ VKEIGTPICQ MKKILKENQK VFMGKKTARA NFVCGACGQH
1301: GHMKTNKHCP KYRRNTESQP ESMDMKKSTG KPSSSDLSGE VWLTPIDNKK PAPKSATKIS VNEATKVGDS TSKTPGSSDV AAVSEIDSGT KLTSRKLKIS
1401: SKAKPKASKV ESDSPFHSLM PAYSRERGES ELHNPSVSGQ LLPSTETDQA ASSRYTTSVP QPSLSIDKDQ AESCRPHRVI WPPTGKEHSQ KKLVIKRLKE
1501: ITDHDSGSLE ETPQFESRKT KRMAELADFQ RQQRLRLSEN FLDWGPKDDR KWRKEQDIST ELHREGKVRR AYDDSTVSEE RSEIAESRRY REVIRSEREE
1601: EKRRKAKQKK KLQRGILENY PPRRNDGISS ESGQNINSLC VSDFERNRTE YAPQPKRRKK GQVGLANILE SIVDTLRVKE VNVSYLFLKP VTKKEAPNYL
1701: EIVKCPMDLS TIRDKVRRME YRDRQQFRHD VWQIKFNAHL YNDGRNLSIP PLADELLVKC DRLLDEYRDE LKEAEKGIVD SSDSLR
0101: KNQMDTGDVQ EELVVGLSEA TLDEKRVTPL PTLYLEDDGM VILQFSEIFA IQEPQKKRQK REIRCITYRD KYISMDISEL IEDDEEVLLK SHGRIDTHGK
0201: KTDQIQLDVP LPIRERSQLV KSGIVRDTTS ESREFTKLGR DSCIMGELLK QDLKDDNSSL CQSQLTMEVF PLDQQEWEHL ILWEISPQFS ANCCEGFKSG
0301: LESAGIMVQV RASNSVTEQE SLNVMNSGGQ TQGDNNNMLE PFFVNPLESF GSRGSQSTNE STNKSRHHPQ LLRLESQWDE DHYRENGDAG RENLKQLNSD
0401: ARGRLSGLAL QDRDMWDESW LDSIIWESDK DLSRSKLIFD LQDEQMIFEV PNNKERKYLQ LHAGSRIVSR SSKSKDGSFQ EGCGSNSGWQ FNISNDKFYM
0501: NGKSAQKLQG NAKKSTVHSL RVFHSAPAIK LQTMKIKLSN KERANFHRPK ALWYPHDNEL AIKQQKILPT QGSMTIVVKS LGGKGSLLTV GREESVSSLK
0601: AKASRKLDFK ETEAVKMFYM GKELEDEKSL AEQNVQPNSL VHLLRTKVHL WPWAQKLPGE NKSLRPPGAF KKKSDLSNQD GHVFLMEYCE ERPLMLSNAG
0701: MGANLCTYYQ KSSPEDQHGN LLRNQSDTLG SVIILEHGNK SPFLGEVHGG CSQSSVETNM YKAPVFPHRL QSTDYLLVRS AKGKLSLRRI NKIVAVGQQE
0801: PRMEIMSPAS KNLHAYLVNR MMAYVYREFK HRDRIAADEL SFSFSNISDA TVRKYMQVCS DLERDANGKA CWSKKRKFDK IPLGLNTLVA PEDVCSYESM
0901: LAGLFRLKHL GITRFTLPAS ISTALAQLPD ERIAAASHIA RELQITPWNL SSSFVTCATQ GRENIERLEI TGVGDPSGRG LGFSYVRVAP KSSAASEHKK
1001: KKAAACRGVP TVTGTDADPR RLSMEAAREV LLKFNVPDEI IAKQTQRHRT AMIRKISSEQ AASGGKVGPT TVGMFSRSQR MSFLQLQQQA REMCHEIWDR
1101: QRLSLSACDD DGNESENEAN SDLDSFVGDL EDLLDAEDGG EGEESNKSMN EKLDGVKGLK MRRWPSQVEK DEEIEDEAAE YVELCRLLMQ DENDKKKKKL
1201: KDVGEGIGSF PPPRSNFEPF IDKKYIATEP DASFLIVNES TVKHTKNVDK ATSKSPKDKQ VKEIGTPICQ MKKILKENQK VFMGKKTARA NFVCGACGQH
1301: GHMKTNKHCP KYRRNTESQP ESMDMKKSTG KPSSSDLSGE VWLTPIDNKK PAPKSATKIS VNEATKVGDS TSKTPGSSDV AAVSEIDSGT KLTSRKLKIS
1401: SKAKPKASKV ESDSPFHSLM PAYSRERGES ELHNPSVSGQ LLPSTETDQA ASSRYTTSVP QPSLSIDKDQ AESCRPHRVI WPPTGKEHSQ KKLVIKRLKE
1501: ITDHDSGSLE ETPQFESRKT KRMAELADFQ RQQRLRLSEN FLDWGPKDDR KWRKEQDIST ELHREGKVRR AYDDSTVSEE RSEIAESRRY REVIRSEREE
1601: EKRRKAKQKK KLQRGILENY PPRRNDGISS ESGQNINSLC VSDFERNRTE YAPQPKRRKK GQVGLANILE SIVDTLRVKE VNVSYLFLKP VTKKEAPNYL
1701: EIVKCPMDLS TIRDKVRRME YRDRQQFRHD VWQIKFNAHL YNDGRNLSIP PLADELLVKC DRLLDEYRDE LKEAEKGIVD SSDSLR
Arabidopsis Description
TAF1Histone acetyltransferase of the TAFII250 family 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSR7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.