Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G505400.1 | Wheat | nucleus | 91.98 | 93.02 |
| TraesCS7B01G431700.2 | Wheat | nucleus | 91.53 | 92.57 |
| TraesCS7A01G514800.1 | Wheat | nucleus | 82.1 | 81.46 |
| Os06t0645800-01 | Rice | nucleus | 34.9 | 70.68 |
| EER90111 | Sorghum | nucleus | 69.64 | 68.79 |
| Zm00001d046579_P019 | Maize | nucleus | 68.74 | 67.79 |
| Os06t0645901-00 | Rice | cytosol, nucleus | 12.57 | 66.08 |
| Os06t0645700-01 | Rice | cytosol, nucleus | 2.08 | 52.11 |
| GSMUA_Achr2P11610_001 | Banana | nucleus | 51.96 | 50.52 |
| CDY22837 | Canola | cytosol | 1.91 | 45.33 |
| Solyc07g006820.2.1 | Tomato | nucleus | 45.79 | 44.76 |
| VIT_12s0028g03940.t01 | Wine grape | nucleus | 47.36 | 44.12 |
| KRH62676 | Soybean | nucleus | 45.85 | 43.25 |
| KRH39697 | Soybean | nucleus | 45.34 | 42.75 |
| AT1G32750.1 | Thale cress | nucleus | 43.27 | 40.18 |
| AT3G19040.2 | Thale cress | nucleus | 36.64 | 36.44 |
| Bra018905.1-P | Field mustard | nucleus | 3.03 | 36.24 |
| CDY49818 | Canola | nucleus | 2.13 | 33.93 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.3.4.4.4 | MapMan:15.3.5.3.2 | MapMan:18.4.7.3 | Gene3D:3.10.20.90 | InterPro:Bromodomain |
| InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000626 |
| InterPro:IPR001487 | InterPro:IPR036427 | PFAM:PF00240 | PFAM:PF00439 | PFAM:PF09247 | PFAM:PF12157 |
| PRINTS:PR00503 | ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS50053 | SMART:SM00213 | SMART:SM00297 |
| SUPFAM:SSF47055 | SUPFAM:SSF47370 | SUPFAM:SSF54236 | InterPro:TAFII-230_TBP-bd_sf | InterPro:TAF_II_230-bd | InterPro:TFIID_sub1_DUF3591 |
| EnsemblPlantsGene:TraesCS7A01G515000 | EnsemblPlants:TraesCS7A01G515000.1 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | TIGR:cd01769 | TIGR:cd04369 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:700795547..700809712
Molecular Weight (calculated)
199731.0 Da
IEP (calculated)
5.347
GRAVY (calculated)
-0.706
Length
1782 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRTASASQPS LVPTPSPLSA PPLLASPPRR RAPPRIPAAS ADGVSEAEAM SDSERDDQDD VATTSAADDD DEDDYEEPGE GNRLLGFMFG NVDDAGGLDA
0101: DYLDEDAKDH LFALADKLGP SLKDIDLTKS SSAPDDPSEQ DYDEKAEDAI DYEDIDEQYD GPEVEAATEE YHLLSKKDYL SSNTMFASVC SKVSVFDEEN
0201: YDEDEEPPND IELPGDYFIQ AEQLGISPSN DNPAIEMLSS SLPQLGESMD VEYEVCKEEI DIEEDQLESK SATSLPVLCI EHGSAILKFS EVFGVQEPVR
0301: KAKTDHHKRP VSKDVRITNI SDIVEDDEEV FLRCAIQDVS SLKHIKMNED FVESDSDELI SSDTFGFKDS CLSEQPMKEA HKDFPTAQQA PVCPDVYPLE
0401: HEDWENGIIW GNSPASESRS CLKSCVISEE SSDTHSEDEA KDYGYVSRYC DVQSRNNDSP ESFGYTEMPA SASYHSPENS YPPLTKETSP EKNDLDHTEP
0501: NNINGTVKIV TMKCLSNLSL LNKELLEGSW LDNIIWDHSE DAPKPKLIMD LKDDQMLFEI LDEENRDHLR SHAFAMIVSR SVRTSTVENF GHNNQIVTFD
0601: GQFNISNDKF YSNKEISQQA KSHTKKRSSM GIKVVHSVPA QKLQTMKLNL SINEIANFHR PRAKWYPHEN KLAVELQGAA CSHGSMTVIV MTLAGKGVKL
0701: LVNADKTPLS VKSKASKKLE FRPSEKIKLF GSGKELQDDI SLAMQNVRSN SILHVVRTEV HLWPKAQRLP GKDKALRPPG AFRKRADLSV KDGHVFLMEY
0801: CEERPLLLAN AGMGARLCTY YQKTSPDDQT ATSLRSNNDG LGTVLAIEPA DKSPFLGDVR SGSHQSCLET NMYRAPAFPH KVASTDYLLV RSPKGMLSLR
0901: RIDKLYAVGQ QEPHMEVFSP RPKNLQNYLL NRILVYVYRE FRVRERPGVL SQIRADEIPI EHPLTEVIVR KGLKHCADLE KGPNGHLFWT QRADFRIPSE
1001: DELRRLLSPE SVCCHESMQA AQHRLKHLGI HKLTQPVGLA SAMDQLPDKA IELAAAAHIE RELQITSWNL TSNFVACMNQ DRESIERLEI SGIGDPSGRG
1101: LGFSYVRVNP VSNLPHKKKP AAAKGTTVTG TDADLRRLSM DAARELLLKF GVPDEQIDKL TRWHRIAMVR KLSSEQAASG IMIDEIPVSK FARGQRMSFL
1201: QLHHQAKEKC QEIWDRQFQS LSAIDGDDNG SDTEAKSNLD SFAGDLENLL DAEEFDNEDV GTADLRSDKG DDMEGLKMRK GSTQVQFNKE NQDDQAEAAL
1301: VKKLLEESGN DIKRKKEPVE MTNYGISMYN QGANKTKPSQ SALALEESTP RGVKEEKRQG AKVDSLICGA CGTLGHMRTN KLCAKYGQDP ETSGLDVISY
1401: ISNPFDEASY VETTKPPGRR LVAKVSSEVP ETEGPDCIEM IKPVKFRCGA PEKSLDRNMS VAGSLVSDKL TMDANDLRST GNASKIKICS KTKSEDYPPD
1501: TPKPSIVIRL PAKAEKDLPR KKVIFKQPEG HVGQLTVIGN RSGQEPRKLR KISELPSFKE NIRENDGWYA GEPCQMNSSQ DRLGLDGNRK SKVVGSDESW
1601: SAFKEQRVIQ ERRLIQARMQ GLSREEELQK SKRKNKKKKR HEFQDDDVLD HRPYRNDRRV PERDRATKRR TPADMTENAP SVKRRRGGEV ELSNILEKIV
1701: DLLRNQTSIS LLFLKPVTKK VAPDYYDIIQ RPMDLGTIRD KARKMEYRNR EEFRHDVAQI ATNAHIYNDT RHPHIPPLAA SS
0101: DYLDEDAKDH LFALADKLGP SLKDIDLTKS SSAPDDPSEQ DYDEKAEDAI DYEDIDEQYD GPEVEAATEE YHLLSKKDYL SSNTMFASVC SKVSVFDEEN
0201: YDEDEEPPND IELPGDYFIQ AEQLGISPSN DNPAIEMLSS SLPQLGESMD VEYEVCKEEI DIEEDQLESK SATSLPVLCI EHGSAILKFS EVFGVQEPVR
0301: KAKTDHHKRP VSKDVRITNI SDIVEDDEEV FLRCAIQDVS SLKHIKMNED FVESDSDELI SSDTFGFKDS CLSEQPMKEA HKDFPTAQQA PVCPDVYPLE
0401: HEDWENGIIW GNSPASESRS CLKSCVISEE SSDTHSEDEA KDYGYVSRYC DVQSRNNDSP ESFGYTEMPA SASYHSPENS YPPLTKETSP EKNDLDHTEP
0501: NNINGTVKIV TMKCLSNLSL LNKELLEGSW LDNIIWDHSE DAPKPKLIMD LKDDQMLFEI LDEENRDHLR SHAFAMIVSR SVRTSTVENF GHNNQIVTFD
0601: GQFNISNDKF YSNKEISQQA KSHTKKRSSM GIKVVHSVPA QKLQTMKLNL SINEIANFHR PRAKWYPHEN KLAVELQGAA CSHGSMTVIV MTLAGKGVKL
0701: LVNADKTPLS VKSKASKKLE FRPSEKIKLF GSGKELQDDI SLAMQNVRSN SILHVVRTEV HLWPKAQRLP GKDKALRPPG AFRKRADLSV KDGHVFLMEY
0801: CEERPLLLAN AGMGARLCTY YQKTSPDDQT ATSLRSNNDG LGTVLAIEPA DKSPFLGDVR SGSHQSCLET NMYRAPAFPH KVASTDYLLV RSPKGMLSLR
0901: RIDKLYAVGQ QEPHMEVFSP RPKNLQNYLL NRILVYVYRE FRVRERPGVL SQIRADEIPI EHPLTEVIVR KGLKHCADLE KGPNGHLFWT QRADFRIPSE
1001: DELRRLLSPE SVCCHESMQA AQHRLKHLGI HKLTQPVGLA SAMDQLPDKA IELAAAAHIE RELQITSWNL TSNFVACMNQ DRESIERLEI SGIGDPSGRG
1101: LGFSYVRVNP VSNLPHKKKP AAAKGTTVTG TDADLRRLSM DAARELLLKF GVPDEQIDKL TRWHRIAMVR KLSSEQAASG IMIDEIPVSK FARGQRMSFL
1201: QLHHQAKEKC QEIWDRQFQS LSAIDGDDNG SDTEAKSNLD SFAGDLENLL DAEEFDNEDV GTADLRSDKG DDMEGLKMRK GSTQVQFNKE NQDDQAEAAL
1301: VKKLLEESGN DIKRKKEPVE MTNYGISMYN QGANKTKPSQ SALALEESTP RGVKEEKRQG AKVDSLICGA CGTLGHMRTN KLCAKYGQDP ETSGLDVISY
1401: ISNPFDEASY VETTKPPGRR LVAKVSSEVP ETEGPDCIEM IKPVKFRCGA PEKSLDRNMS VAGSLVSDKL TMDANDLRST GNASKIKICS KTKSEDYPPD
1501: TPKPSIVIRL PAKAEKDLPR KKVIFKQPEG HVGQLTVIGN RSGQEPRKLR KISELPSFKE NIRENDGWYA GEPCQMNSSQ DRLGLDGNRK SKVVGSDESW
1601: SAFKEQRVIQ ERRLIQARMQ GLSREEELQK SKRKNKKKKR HEFQDDDVLD HRPYRNDRRV PERDRATKRR TPADMTENAP SVKRRRGGEV ELSNILEKIV
1701: DLLRNQTSIS LLFLKPVTKK VAPDYYDIIQ RPMDLGTIRD KARKMEYRNR EEFRHDVAQI ATNAHIYNDT RHPHIPPLAA SS
0001: MAESNGKGSH NETSSDDDDE YEDNSRGFNL GFIFGNVDNS GDLDADYLDE DAKEHLSALA DKLGSSLPDI NLLAKSERTA SDPAEQDYDR KAEDAVDYED
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
Arabidopsis Description
TAF1Transcription initiation factor TFIID subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LRK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.