Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046579_P019 | Maize | nucleus | 93.57 | 93.41 |
| Os06t0645800-01 | Rice | nucleus | 38.75 | 79.43 |
| Os06t0645700-01 | Rice | cytosol, nucleus | 2.99 | 76.06 |
| TraesCS7A01G514800.1 | Wheat | nucleus | 75.44 | 75.78 |
| TraesCS7D01G505200.1 | Wheat | nucleus | 75.39 | 75.72 |
| TraesCS7B01G431500.1 | Wheat | nucleus | 75.06 | 75.39 |
| HORVU7Hr1G115120.1 | Barley | plastid | 63.53 | 72.67 |
| TraesCS7D01G505400.1 | Wheat | nucleus | 69.9 | 71.57 |
| TraesCS7B01G431700.2 | Wheat | nucleus | 69.73 | 71.4 |
| TraesCS7A01G515000.1 | Wheat | plastid | 68.79 | 69.64 |
| CDY22837 | Canola | cytosol | 2.77 | 66.67 |
| Os06t0645901-00 | Rice | cytosol, nucleus | 12.36 | 65.78 |
| GSMUA_Achr2P11610_001 | Banana | nucleus | 55.93 | 55.05 |
| Solyc07g006820.2.1 | Tomato | nucleus | 49.89 | 49.37 |
| VIT_12s0028g03940.t01 | Wine grape | nucleus | 52.05 | 49.09 |
| KRH62676 | Soybean | nucleus | 49.22 | 47.01 |
| KRH39697 | Soybean | nucleus | 49.22 | 46.98 |
| CDY49818 | Canola | nucleus | 2.88 | 46.43 |
| Bra018905.1-P | Field mustard | nucleus | 3.82 | 46.31 |
| AT1G32750.1 | Thale cress | nucleus | 46.4 | 43.62 |
| AT3G19040.2 | Thale cress | nucleus | 39.47 | 39.73 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.3.4.4.4 | MapMan:15.3.5.3.2 | MapMan:18.4.7.3 | Gene3D:3.10.20.90 | EntrezGene:8069327 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | UniProt:C5Z6R1 | ncoils:Coil | EnsemblPlants:EER90111 |
| ProteinID:EER90111 | ProteinID:EER90111.1 | GO:GO:0001075 | GO:GO:0001129 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005669 |
| GO:GO:0006139 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016573 | GO:GO:0016740 | GO:GO:0017025 | GO:GO:0019538 | GO:GO:0043565 |
| GO:GO:0045944 | GO:GO:0051123 | InterPro:IPR000626 | InterPro:IPR001487 | InterPro:IPR036427 | PFAM:PF00240 |
| PFAM:PF00439 | PFAM:PF09247 | PFAM:PF12157 | PRINTS:PR00503 | ScanProsite:PS00633 | PFscan:PS50014 |
| PFscan:PS50053 | PANTHER:PTHR13900 | SMART:SM00213 | SMART:SM00297 | EnsemblPlantsGene:SORBI_3010G206900 | SUPFAM:SSF47055 |
| SUPFAM:SSF47370 | SUPFAM:SSF54236 | unigene:Sbi.12008 | InterPro:TAFII-230_TBP-bd_sf | InterPro:TAF_II_230-bd | InterPro:TFIID_sub1_DUF3591 |
| UniParc:UPI0001A89A97 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | RefSeq:XP_002438744.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:-:54970059..54987477
Molecular Weight (calculated)
202388.0 Da
IEP (calculated)
5.307
GRAVY (calculated)
-0.767
Length
1804 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSDGELHEEE NPTNSAADDD DDEDYEEPGG GNHFLGFMFG NVDDSGDLDA DYLDEDAKEH LFALADKLGP SLKDIDLIKS SPAPTDPSEQ DYDEKAEDAV
0101: DYEDIDEEYD GPEVEAATEE DNVLSKKDYF SSSTVYASVN STVSVFDDEN YDEEEEPPSE KEEPPGDSAA QNLSSVSIEQ ADMATSSDNL ATEKLGLLSH
0201: PEESMDFEYE DLENEKGTGE GHLAPESATS LPVLCIEDGN AILRFSEIFG IQEPVRKVKT DHHKRPVNKE LHITNVADNV EEDEELILRS TIQNFSTLKH
0301: NQMNEDFVES DSDESISDVT LRLKDSCLSE QPMKDAHKDI RTVQRSPICP DFYPLEHDDW ENDIIWNNSP ATDQQPYAKI CESEESVDTH GEDQGKDYGQ
0401: VSRCWDVRSK SNGSPVIEET FGCTEMPAPA NYCSPGKSFP PLTNEDNLDH ITPNNLDDAV KIDTTMRLNN LSLLNRELLE GSWLDNIIWD PNEVTPKPKL
0501: IFDLKDDHML FEILDEKNVG HIRSHARAMI VSQSTKTSTP TVDNFDNQAK TLSGRFNISN DKFYSNRKTP QQAKSHTKKR ALMGIKVVHS APAHKLQTMK
0601: PVLSNKEIAN FHRPRAKWYP HENKIAAQLQ GTACSHGRMA VLLMSLGGKG VKILVNAEDT PVSIKLKASK KFELKPSEKI TLFCSGKELQ DDISLAMQNV
0701: RPNSIVHVVR TEVYLWPKAQ KLPGEDKPLR PPGAFRKKTD LSVKDGHVFL MEYCEERPLL LSNAGMGARL CTYYQKTSPT DQAAASLRNN SDGLGTVLAI
0801: DPSDKSPFLG DIHSGSHQSC LETNMYRSPV FPHKVAPTDY LLVRSAKGAL SLRRIDKLYA VGQQEPHMEV FSPGTKNAQT YLLNRVLAYV YREFRARERP
0901: DGIPQIRADE LPIQSPLTEA IVKKRLKHCA DLKKGPKGHF FWTQRPDFRV PSEEELRRLL TPESVCCYES MQAGLYRLKR LGILKLTQPV GLASAMNQLP
1001: DEAIELAAAS HIERELQITS WNLTSNFVAC TNQDRENIER LEITGVGDPS GRGLGFSYVR VAPKAPASNS VLKKKSAAAK GTTVTGTDAD LRRLSMDAAR
1101: ELLLKFGVPE EQIDKLTRWH RIAMVRKLSS EQAASGITID EIPVSKFARG QRMSFLQLQQ QTREKCQEIW DRQVQSLSAI DGDDNGSDTE ANSDLDSFAG
1201: DLENLLDAEE FDDEDTSTAD LRIDKADGMR GLKMRRCSTH AQINEEIEDD ETEASLAKKL LEDDGNDVKR KKQPELTNCG TSSANKMKQS KSGQMIKSSG
1301: YAGALTPKES TPREGKEVEN SFAEGGLPSK LKPKMALDVN EILLVKKKSV LGKDGPKEKK QGARGDTLVC GACGQVGHMR TNKLCPKYGE DPEMSEMDAN
1401: SVKPNPTDIN HLQAKIPKRL ITKVSSEVTE TEGPEGIEKT KSVPVKFKVG APDKSLERNM PLSVSLVSDK RVMDVTDSRS TGKVNKIVIP NKMKSDDFPP
1501: DTPKPSVVFR PPAEEKDVPR KKITIKQPKG IDQQRHVEPR SGQEPTRKIR KIVELSSFED KSREDDHWFG GEPSQMNSSH ERRLGLDGKR SKAIVQNDRS
1601: WRDFEEQREM PQPRLFDATI YASREEDHLK SKKKNKKKKK HEFKDDDLLD HRPYRNDRRV PERHRAVKRS SPAHVIGYAS SAKRRRGGEV ELSNILEKIV
1701: DHLRGLSGSL LFLKPVTKKD APDYLDYVQR PMDLGTIRDK VRKMVYRNRD EFRHDVAQIQ LNAHLYNDGR HPHIPPLADE LMEVCDHLLD ESADLLTEAE
1801: DAIE
0101: DYEDIDEEYD GPEVEAATEE DNVLSKKDYF SSSTVYASVN STVSVFDDEN YDEEEEPPSE KEEPPGDSAA QNLSSVSIEQ ADMATSSDNL ATEKLGLLSH
0201: PEESMDFEYE DLENEKGTGE GHLAPESATS LPVLCIEDGN AILRFSEIFG IQEPVRKVKT DHHKRPVNKE LHITNVADNV EEDEELILRS TIQNFSTLKH
0301: NQMNEDFVES DSDESISDVT LRLKDSCLSE QPMKDAHKDI RTVQRSPICP DFYPLEHDDW ENDIIWNNSP ATDQQPYAKI CESEESVDTH GEDQGKDYGQ
0401: VSRCWDVRSK SNGSPVIEET FGCTEMPAPA NYCSPGKSFP PLTNEDNLDH ITPNNLDDAV KIDTTMRLNN LSLLNRELLE GSWLDNIIWD PNEVTPKPKL
0501: IFDLKDDHML FEILDEKNVG HIRSHARAMI VSQSTKTSTP TVDNFDNQAK TLSGRFNISN DKFYSNRKTP QQAKSHTKKR ALMGIKVVHS APAHKLQTMK
0601: PVLSNKEIAN FHRPRAKWYP HENKIAAQLQ GTACSHGRMA VLLMSLGGKG VKILVNAEDT PVSIKLKASK KFELKPSEKI TLFCSGKELQ DDISLAMQNV
0701: RPNSIVHVVR TEVYLWPKAQ KLPGEDKPLR PPGAFRKKTD LSVKDGHVFL MEYCEERPLL LSNAGMGARL CTYYQKTSPT DQAAASLRNN SDGLGTVLAI
0801: DPSDKSPFLG DIHSGSHQSC LETNMYRSPV FPHKVAPTDY LLVRSAKGAL SLRRIDKLYA VGQQEPHMEV FSPGTKNAQT YLLNRVLAYV YREFRARERP
0901: DGIPQIRADE LPIQSPLTEA IVKKRLKHCA DLKKGPKGHF FWTQRPDFRV PSEEELRRLL TPESVCCYES MQAGLYRLKR LGILKLTQPV GLASAMNQLP
1001: DEAIELAAAS HIERELQITS WNLTSNFVAC TNQDRENIER LEITGVGDPS GRGLGFSYVR VAPKAPASNS VLKKKSAAAK GTTVTGTDAD LRRLSMDAAR
1101: ELLLKFGVPE EQIDKLTRWH RIAMVRKLSS EQAASGITID EIPVSKFARG QRMSFLQLQQ QTREKCQEIW DRQVQSLSAI DGDDNGSDTE ANSDLDSFAG
1201: DLENLLDAEE FDDEDTSTAD LRIDKADGMR GLKMRRCSTH AQINEEIEDD ETEASLAKKL LEDDGNDVKR KKQPELTNCG TSSANKMKQS KSGQMIKSSG
1301: YAGALTPKES TPREGKEVEN SFAEGGLPSK LKPKMALDVN EILLVKKKSV LGKDGPKEKK QGARGDTLVC GACGQVGHMR TNKLCPKYGE DPEMSEMDAN
1401: SVKPNPTDIN HLQAKIPKRL ITKVSSEVTE TEGPEGIEKT KSVPVKFKVG APDKSLERNM PLSVSLVSDK RVMDVTDSRS TGKVNKIVIP NKMKSDDFPP
1501: DTPKPSVVFR PPAEEKDVPR KKITIKQPKG IDQQRHVEPR SGQEPTRKIR KIVELSSFED KSREDDHWFG GEPSQMNSSH ERRLGLDGKR SKAIVQNDRS
1601: WRDFEEQREM PQPRLFDATI YASREEDHLK SKKKNKKKKK HEFKDDDLLD HRPYRNDRRV PERHRAVKRS SPAHVIGYAS SAKRRRGGEV ELSNILEKIV
1701: DHLRGLSGSL LFLKPVTKKD APDYLDYVQR PMDLGTIRDK VRKMVYRNRD EFRHDVAQIQ LNAHLYNDGR HPHIPPLADE LMEVCDHLLD ESADLLTEAE
1801: DAIE
0001: MAESNGKGSH NETSSDDDDE YEDNSRGFNL GFIFGNVDNS GDLDADYLDE DAKEHLSALA DKLGSSLPDI NLLAKSERTA SDPAEQDYDR KAEDAVDYED
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
Arabidopsis Description
TAF1Transcription initiation factor TFIID subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LRK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.