Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EER90111 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73960.1 | EER90111 | AT1G32750.1 | 17340043 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020432_P001 | Maize | nucleus | 79.63 | 92.86 |
| Os09t0410125-00 | Rice | extracellular | 16.77 | 72.36 |
| HORVU3Hr1G023590.2 | Barley | mitochondrion | 11.52 | 69.26 |
| HORVU5Hr1G061200.9 | Barley | nucleus | 65.08 | 64.07 |
| TraesCS5D01G213200.1 | Wheat | nucleus | 65.08 | 64.02 |
| TraesCS5A01G207000.1 | Wheat | nucleus | 64.65 | 63.82 |
| TraesCS5B01G205400.1 | Wheat | nucleus | 64.87 | 63.81 |
| GSMUA_Achr3P07300_001 | Banana | nucleus | 18.29 | 53.47 |
| Os09t0410300-01 | Rice | nucleus | 8.42 | 52.23 |
| Os09t0409950-01 | Rice | cytosol, mitochondrion, nucleus | 7.2 | 51.55 |
| CDX73029 | Canola | nucleus | 47.3 | 47.68 |
| CDX96499 | Canola | nucleus | 47.16 | 47.57 |
| AT1G73960.1 | Thale cress | cytosol | 47.23 | 47.19 |
| Bra015951.1-P | Field mustard | nucleus | 47.08 | 47.02 |
| VIT_17s0000g04200.t01 | Wine grape | nucleus | 41.68 | 42.6 |
| KRH03813 | Soybean | nucleus | 41.04 | 41.07 |
| GSMUA_Achr3P07290_001 | Banana | extracellular | 27.93 | 40.84 |
| KRH56695 | Soybean | nucleus | 40.53 | 40.56 |
| Solyc03g119780.2.1 | Tomato | nucleus | 39.38 | 36.25 |
| KRH54756 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 3.24 | 34.35 |
| PGSC0003DMT400014328 | Potato | nucleus | 7.78 | 18.75 |
Protein Annotations
| Gene3D:1.10.390.60 | MapMan:15.3.5.3.3 | Gene3D:2.60.40.1730 | UniProt:A0A1B6QCI6 | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005669 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008237 | GO:GO:0008270 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlants:KXG35610 | ProteinID:KXG35610 |
| ProteinID:KXG35610.1 | PFAM:PF01433 | PANTHER:PTHR15137 | InterPro:Peptidase_M1_N | EnsemblPlantsGene:SORBI_3002G198200 | SUPFAM:SSF48371 |
| SUPFAM:SSF55486 | SUPFAM:SSF63737 | InterPro:TAF2 | UniParc:UPI00081ABBB8 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:+:58730158..58752481
Molecular Weight (calculated)
154531.0 Da
IEP (calculated)
7.042
GRAVY (calculated)
-0.466
Length
1389 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAKARKQKGD GGGAGAGATV LHQKLCLSID MENQLIYGYT EIKVLLAEND TFALHADNMT IRSILVDGET VEFDYSPHWK NESDQPNWSS ISCLKTAADA
0101: ACSTYTSSLN REATPNLIVS SERSVKSMTE QQLDENSEKH EENSGRLEEH GAKPVQTSYD QILNGCNGSA VEEGIENSAV EEGKEKEKEK EKEKEEENGN
0201: EKSKENGNES ENEKVKNIKL FHIDYILEKA ETGIHFVGNV MHSSSQIRRA HCWFPCVDSS TQRCPFDLEF TVSTDFIAVS NGDLLYQVLS KEDPSKKTYV
0301: YKLNTPVSAQ WISLVVGPLE VLPDQNDINV SHICLSPALA KLQNTIACFH DAYRCYEDYL AAPFPLGLYK QIFLPSEMTV LPASLGASTC IFSSDILHDE
0401: KVIDQIIGTR IKLAYALAKQ WFGIYTSAEE PNDEWLLDGL AGFLTELFIK RYLGNNEARY RRFKANCTVC ESDVSGATAL SSTAASSDLY GTQTVGSYGK
0501: VRSLKAVAVL QMLEKQMGPD SFRKILQVIV APNRASRTLS TKEFRHLANK VGNLERPFLK EFFPRWVESC GCPIMRLGIS YSKKRNMIEL AVSRGCTAKA
0601: TPDPDIHTNG DTREGDAGWP GMMSVRVHET DGAYDHPVLP MAGEALQVVE IQCHSRLAAK RVWKKKNTKL DGSDDNIDAS TQENRTSVDS PLLWIRVDPE
0701: MEYLAEIHFH QPVQMWINQL EKDKDVISQS QAISVLEKLP QLSFAVINAL NNFLNDTKAF WRVRIEAAYA LAVTSSEATD LAGLLHLVKF YKSRRFDADI
0801: GMPRPNDFHD VPEYFVLEAI PHAVALVRSS DKNSPKGAIE FILQLLKYND NNGNIYSDVY WLSAMVQAIG ELEFGQQGMG FLSSLLKRID RLLQFDNFMP
0901: GYNGVLTVSC IRTLARIARR VSSSVCLDRI CDLIAPFRDM DKPWKVRIEA SRVLIDLELH HKGLDAALLL FLKYVDEEKS LRGATKLAVH VLRICQASIV
1001: PYANDQINLT TLIGLLHLLA GTKAYNNVFL RHHVFCILQV AAGRSPTLFG VPKIVTSPPV VKDICSDQHT KADSSIPQPS KPQEPSTSTP SVREVLPTSG
1101: PTKDADNISN CSERRNVVKI RVKLTASSSK ASDADHRGHS HGGRNENEPG PCSSMSVDAP MVGAANEPLN VSNHNIEEQN SCHDRESRMS ASVSNAKLMD
1201: RHDINKELQC TADSRLDALP KDQFSPAVNP PEVLDKPGSQ LEGVSTSYDG NQAPESVNGV EMKERKKKDK KDKKRKRDEK RDKKDDPEYL EKKRLKKEKK
1301: KMEKELARKQ LEGAGRAIPE QRKTVKPSGS QEVLPARPPA PVLSAEPAPV RSSEPQVSSK ETTVDTARTA AKPRIKIKVK PLVRKPEGN
0101: ACSTYTSSLN REATPNLIVS SERSVKSMTE QQLDENSEKH EENSGRLEEH GAKPVQTSYD QILNGCNGSA VEEGIENSAV EEGKEKEKEK EKEKEEENGN
0201: EKSKENGNES ENEKVKNIKL FHIDYILEKA ETGIHFVGNV MHSSSQIRRA HCWFPCVDSS TQRCPFDLEF TVSTDFIAVS NGDLLYQVLS KEDPSKKTYV
0301: YKLNTPVSAQ WISLVVGPLE VLPDQNDINV SHICLSPALA KLQNTIACFH DAYRCYEDYL AAPFPLGLYK QIFLPSEMTV LPASLGASTC IFSSDILHDE
0401: KVIDQIIGTR IKLAYALAKQ WFGIYTSAEE PNDEWLLDGL AGFLTELFIK RYLGNNEARY RRFKANCTVC ESDVSGATAL SSTAASSDLY GTQTVGSYGK
0501: VRSLKAVAVL QMLEKQMGPD SFRKILQVIV APNRASRTLS TKEFRHLANK VGNLERPFLK EFFPRWVESC GCPIMRLGIS YSKKRNMIEL AVSRGCTAKA
0601: TPDPDIHTNG DTREGDAGWP GMMSVRVHET DGAYDHPVLP MAGEALQVVE IQCHSRLAAK RVWKKKNTKL DGSDDNIDAS TQENRTSVDS PLLWIRVDPE
0701: MEYLAEIHFH QPVQMWINQL EKDKDVISQS QAISVLEKLP QLSFAVINAL NNFLNDTKAF WRVRIEAAYA LAVTSSEATD LAGLLHLVKF YKSRRFDADI
0801: GMPRPNDFHD VPEYFVLEAI PHAVALVRSS DKNSPKGAIE FILQLLKYND NNGNIYSDVY WLSAMVQAIG ELEFGQQGMG FLSSLLKRID RLLQFDNFMP
0901: GYNGVLTVSC IRTLARIARR VSSSVCLDRI CDLIAPFRDM DKPWKVRIEA SRVLIDLELH HKGLDAALLL FLKYVDEEKS LRGATKLAVH VLRICQASIV
1001: PYANDQINLT TLIGLLHLLA GTKAYNNVFL RHHVFCILQV AAGRSPTLFG VPKIVTSPPV VKDICSDQHT KADSSIPQPS KPQEPSTSTP SVREVLPTSG
1101: PTKDADNISN CSERRNVVKI RVKLTASSSK ASDADHRGHS HGGRNENEPG PCSSMSVDAP MVGAANEPLN VSNHNIEEQN SCHDRESRMS ASVSNAKLMD
1201: RHDINKELQC TADSRLDALP KDQFSPAVNP PEVLDKPGSQ LEGVSTSYDG NQAPESVNGV EMKERKKKDK KDKKRKRDEK RDKKDDPEYL EKKRLKKEKK
1301: KMEKELARKQ LEGAGRAIPE QRKTVKPSGS QEVLPARPPA PVLSAEPAPV RSSEPQVSSK ETTVDTARTA AKPRIKIKVK PLVRKPEGN
0001: MAKARKPKNE EAPGAKTSEN TGAKVLHQKL FLSIDFKKRQ IYGYTELEVS VPDIGIVGLH AENLGIESVL VDGEPTVFEY YPHHQNSETE SNWNSVSDPA
0101: SAADAAAMEY VGVLKREDTA NLLINCCKPS KDLSEQLDSV TLENGSQSSG EAKQNVKLIR INYWVEKIES GIHFDGNIVH TDNQMRRARC WFPCIDDEYH
0201: RCSFDLEFTV PHNFVAVSVG KLLYQVMCKE DTTQKTYVYE LAIPIAPRWV SLVAGPLEIL PDQTNFLISN LCLPHDLSRL RNTMEFFHEA YSYYEDYLSA
0301: NFPFGFYKQV FLPPEMVVTS STSGASLSIF SSHILYDERV IDQTIDTRIK LASALAKQWF GVYITPESPN DDWLLDGLAG FLTDMFIKQF LGNNEARYRR
0401: YKANCAVCKA DDSGAMCLSS SPSCRDLFGT HSIGMHGKIR SWKSGAVLQM LEKQMGSDSF RKILQKIISR AKDPSNSIRS LSTKEFRQFA NKIGNLERPF
0501: LKEFFQRWVA SYGCPVLRIG LSYNKRKNNV EMAALRECTA ALDARLSVIG ATSDSESRDV DAGWPGIMSI RVYELDGMSD HPKLPMAGDR WQLLELPCHS
0601: KLAAKRYQKP KKGGKPDGAE DNVDAIAPLE NKTSIESPLA WIKADPEMEY IAEIHLHQPL QMWVNQLEKD GDVVAQAQAI ASLEALKQHS FSIVNALKNV
0701: LTDSKVFWRI RIAAAFALAK TASEESDWAG LQHLIKFYKS RRFDAEIGLP KPNDFRDFPE YFVLEAIPHA IAIVRGAEGK SPREAVEFIL QLLKYNDNSG
0801: NSYSDVFWLA VLVQSVGDLE FCQQSLTFLA PLLKRIDRLL QFDRLMPSYN GILTISCIRT LAQTALKLSD SISFDHICKL IEPFRNSDTI LQIRIEGSRA
0901: LLDIEYQSKG ISSALLLFMK YLVEESSLRG QVKLCVHTMR LCQIAVGCDS DDCVDTVTLL DLLHLFKSHV VFNNELLRYY LFCIFQILAG RPPTLFGVPK
1001: EKPLQLVDVE ACIEPKNVFL VPGAEAGEPS LSALGDAKGQ SLDVAPYGVP IIPQEMFMPI VPELMLPEPV AAYDETQHLE PRMESQNQPS HENPIVHEIP
1101: SDVEGPTEEL AHREANPPTK EPQKEPDVVS VSVSHEVKKS VIRIKVRPSG ATSRAEGSAR TIERSQGIVV RHDIDRGQTS SASVDAPQRI STDAVSISNQ
1201: NHVEEVNSCH DVGSRMTASI GSVKFASEGD IFGKELQCTA ESGKPSTSQK ADNNNRTVPP SFLPLDHSME NEAQQKYASL QTLSIGKEKE KKKDKEKKEK
1301: KRKREDPVYL EKKRLKKEKK RKEKEMAKLV SSTTDPAKKK IESVAEVKEE EPSDGAMLIK VEPKTEPSTA EARPLPKFRI KLKSKAFNNS
0101: SAADAAAMEY VGVLKREDTA NLLINCCKPS KDLSEQLDSV TLENGSQSSG EAKQNVKLIR INYWVEKIES GIHFDGNIVH TDNQMRRARC WFPCIDDEYH
0201: RCSFDLEFTV PHNFVAVSVG KLLYQVMCKE DTTQKTYVYE LAIPIAPRWV SLVAGPLEIL PDQTNFLISN LCLPHDLSRL RNTMEFFHEA YSYYEDYLSA
0301: NFPFGFYKQV FLPPEMVVTS STSGASLSIF SSHILYDERV IDQTIDTRIK LASALAKQWF GVYITPESPN DDWLLDGLAG FLTDMFIKQF LGNNEARYRR
0401: YKANCAVCKA DDSGAMCLSS SPSCRDLFGT HSIGMHGKIR SWKSGAVLQM LEKQMGSDSF RKILQKIISR AKDPSNSIRS LSTKEFRQFA NKIGNLERPF
0501: LKEFFQRWVA SYGCPVLRIG LSYNKRKNNV EMAALRECTA ALDARLSVIG ATSDSESRDV DAGWPGIMSI RVYELDGMSD HPKLPMAGDR WQLLELPCHS
0601: KLAAKRYQKP KKGGKPDGAE DNVDAIAPLE NKTSIESPLA WIKADPEMEY IAEIHLHQPL QMWVNQLEKD GDVVAQAQAI ASLEALKQHS FSIVNALKNV
0701: LTDSKVFWRI RIAAAFALAK TASEESDWAG LQHLIKFYKS RRFDAEIGLP KPNDFRDFPE YFVLEAIPHA IAIVRGAEGK SPREAVEFIL QLLKYNDNSG
0801: NSYSDVFWLA VLVQSVGDLE FCQQSLTFLA PLLKRIDRLL QFDRLMPSYN GILTISCIRT LAQTALKLSD SISFDHICKL IEPFRNSDTI LQIRIEGSRA
0901: LLDIEYQSKG ISSALLLFMK YLVEESSLRG QVKLCVHTMR LCQIAVGCDS DDCVDTVTLL DLLHLFKSHV VFNNELLRYY LFCIFQILAG RPPTLFGVPK
1001: EKPLQLVDVE ACIEPKNVFL VPGAEAGEPS LSALGDAKGQ SLDVAPYGVP IIPQEMFMPI VPELMLPEPV AAYDETQHLE PRMESQNQPS HENPIVHEIP
1101: SDVEGPTEEL AHREANPPTK EPQKEPDVVS VSVSHEVKKS VIRIKVRPSG ATSRAEGSAR TIERSQGIVV RHDIDRGQTS SASVDAPQRI STDAVSISNQ
1201: NHVEEVNSCH DVGSRMTASI GSVKFASEGD IFGKELQCTA ESGKPSTSQK ADNNNRTVPP SFLPLDHSME NEAQQKYASL QTLSIGKEKE KKKDKEKKEK
1301: KRKREDPVYL EKKRLKKEKK RKEKEMAKLV SSTTDPAKKK IESVAEVKEE EPSDGAMLIK VEPKTEPSTA EARPLPKFRI KLKSKAFNNS
Arabidopsis Description
TAF2Transcription initiation factor TFIID subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.