Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os06t0645700-01 | |
| Os06t0645800-01 | |
| Os06t0645901-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73960.1 | Os06t0645700-01 | AT1G32750.1 | 17340043 |
| AT1G73960.1 | Os06t0645800-01 | AT1G32750.1 | 17340043 |
| AT1G73960.1 | Os06t0645901-00 | AT1G32750.1 | 17340043 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P07300_001 | Banana | nucleus | 37.11 | 15.16 |
| Zm00001d020432_P001 | Maize | nucleus | 50.0 | 8.14 |
| TraesCS5A01G207000.1 | Wheat | nucleus | 55.67 | 7.68 |
| TraesCS5D01G213200.1 | Wheat | nucleus | 55.67 | 7.65 |
| HORVU5Hr1G061200.9 | Barley | nucleus | 54.64 | 7.51 |
| TraesCS5B01G205400.1 | Wheat | nucleus | 54.64 | 7.51 |
| KXG35610 | Sorghum | nucleus | 51.55 | 7.2 |
| KRH56695 | Soybean | nucleus | 36.08 | 5.04 |
| CDX73029 | Canola | nucleus | 35.57 | 5.01 |
| KRH03813 | Soybean | nucleus | 35.57 | 4.97 |
| CDX96499 | Canola | nucleus | 35.05 | 4.94 |
| VIT_17s0000g04200.t01 | Wine grape | nucleus | 34.54 | 4.93 |
| Bra015951.1-P | Field mustard | nucleus | 35.05 | 4.89 |
| AT1G73960.1 | Thale cress | cytosol | 34.02 | 4.75 |
| Solyc03g119780.2.1 | Tomato | nucleus | 34.02 | 4.37 |
| KRH54756 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 1.03 | 1.53 |
| PGSC0003DMT400014328 | Potato | nucleus | 3.61 | 1.22 |
| GSMUA_Achr3P07290_001 | Banana | extracellular | 4.64 | 0.95 |
| Os09t0410125-00 | Rice | extracellular | 1.55 | 0.93 |
| Os09t0410300-01 | Rice | nucleus | 1.03 | 0.89 |
| HORVU3Hr1G023590.2 | Barley | mitochondrion | 0.52 | 0.43 |
Protein Annotations
| Gene3D:2.60.40.1730 | MapMan:35.1 | UniProt:A0A0P0XM51 | ProteinID:BAT08037.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 |
| GO:GO:0005669 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008237 | GO:GO:0008270 |
| GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:Os09g0409950 | EnsemblPlants:Os09t0409950-01 | SUPFAM:SSF63737 | UniParc:UPI000393AFD0 |
| SEG:seg | : | : | : | : | : |
Description
brassinosteroid receptor kinase (BRI1)-interacting protein 120, BRI1-interacting protein 120, brassinosteroid receptor kinase-interacting protein 120Hypothetical conserved gene. (Os09t0409950-01)
Coordinates
chr9:+:14531028..14533972
Molecular Weight (calculated)
20814.6 Da
IEP (calculated)
4.411
GRAVY (calculated)
-0.953
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKARKQKGE EQKPDGGGAG GGGGGATVLH QKLCLSIDME NRLIYGYTEI KVQAENDTFA LHADNMTIRN ILVDGQAAEF EYSPQWKNAG DQQSWSSVSC
101: SKTAADAACS VYISSLNSEA APNLIISSER SSKAITEPQY EENGENHEEN GEKHEENGEK QNENGEKCEE NGGKPAQISD DQAVNGCNGS ADKK
101: SKTAADAACS VYISSLNSEA APNLIISSER SSKAITEPQY EENGENHEEN GEKHEENGEK QNENGEKCEE NGGKPAQISD DQAVNGCNGS ADKK
001: MAKARKPKNE EAPGAKTSEN TGAKVLHQKL FLSIDFKKRQ IYGYTELEVS VPDIGIVGLH AENLGIESVL VDGEPTVFEY YPHHQNSETE SNWNSVSDPA
101: SAADAAAMEY VGVLKREDTA NLLINCCKPS KDLSEQLDSV TLENGSQSSG EAKQNVKLIR INYWVEKIES GIHFDGNIVH TDNQMRRARC WFPCIDDEYH
201: RCSFDLEFTV PHNFVAVSVG KLLYQVMCKE DTTQKTYVYE LAIPIAPRWV SLVAGPLEIL PDQTNFLISN LCLPHDLSRL RNTMEFFHEA YSYYEDYLSA
301: NFPFGFYKQV FLPPEMVVTS STSGASLSIF SSHILYDERV IDQTIDTRIK LASALAKQWF GVYITPESPN DDWLLDGLAG FLTDMFIKQF LGNNEARYRR
401: YKANCAVCKA DDSGAMCLSS SPSCRDLFGT HSIGMHGKIR SWKSGAVLQM LEKQMGSDSF RKILQKIISR AKDPSNSIRS LSTKEFRQFA NKIGNLERPF
501: LKEFFQRWVA SYGCPVLRIG LSYNKRKNNV EMAALRECTA ALDARLSVIG ATSDSESRDV DAGWPGIMSI RVYELDGMSD HPKLPMAGDR WQLLELPCHS
601: KLAAKRYQKP KKGGKPDGAE DNVDAIAPLE NKTSIESPLA WIKADPEMEY IAEIHLHQPL QMWVNQLEKD GDVVAQAQAI ASLEALKQHS FSIVNALKNV
701: LTDSKVFWRI RIAAAFALAK TASEESDWAG LQHLIKFYKS RRFDAEIGLP KPNDFRDFPE YFVLEAIPHA IAIVRGAEGK SPREAVEFIL QLLKYNDNSG
801: NSYSDVFWLA VLVQSVGDLE FCQQSLTFLA PLLKRIDRLL QFDRLMPSYN GILTISCIRT LAQTALKLSD SISFDHICKL IEPFRNSDTI LQIRIEGSRA
901: LLDIEYQSKG ISSALLLFMK YLVEESSLRG WLYSHAGT
101: SAADAAAMEY VGVLKREDTA NLLINCCKPS KDLSEQLDSV TLENGSQSSG EAKQNVKLIR INYWVEKIES GIHFDGNIVH TDNQMRRARC WFPCIDDEYH
201: RCSFDLEFTV PHNFVAVSVG KLLYQVMCKE DTTQKTYVYE LAIPIAPRWV SLVAGPLEIL PDQTNFLISN LCLPHDLSRL RNTMEFFHEA YSYYEDYLSA
301: NFPFGFYKQV FLPPEMVVTS STSGASLSIF SSHILYDERV IDQTIDTRIK LASALAKQWF GVYITPESPN DDWLLDGLAG FLTDMFIKQF LGNNEARYRR
401: YKANCAVCKA DDSGAMCLSS SPSCRDLFGT HSIGMHGKIR SWKSGAVLQM LEKQMGSDSF RKILQKIISR AKDPSNSIRS LSTKEFRQFA NKIGNLERPF
501: LKEFFQRWVA SYGCPVLRIG LSYNKRKNNV EMAALRECTA ALDARLSVIG ATSDSESRDV DAGWPGIMSI RVYELDGMSD HPKLPMAGDR WQLLELPCHS
601: KLAAKRYQKP KKGGKPDGAE DNVDAIAPLE NKTSIESPLA WIKADPEMEY IAEIHLHQPL QMWVNQLEKD GDVVAQAQAI ASLEALKQHS FSIVNALKNV
701: LTDSKVFWRI RIAAAFALAK TASEESDWAG LQHLIKFYKS RRFDAEIGLP KPNDFRDFPE YFVLEAIPHA IAIVRGAEGK SPREAVEFIL QLLKYNDNSG
801: NSYSDVFWLA VLVQSVGDLE FCQQSLTFLA PLLKRIDRLL QFDRLMPSYN GILTISCIRT LAQTALKLSD SISFDHICKL IEPFRNSDTI LQIRIEGSRA
901: LLDIEYQSKG ISSALLLFMK YLVEESSLRG WLYSHAGT
Arabidopsis Description
TAF2Transcription initiation factor TFIID subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.