Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 4
- nucleus 1
- extracellular 4
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G061180.1 | Barley | mitochondrion | 26.72 | 22.88 |
| Zm00001d005736_P003 | Maize | cytosol | 25.19 | 8.99 |
| GSMUA_Achr3P07290_001 | Banana | extracellular | 53.44 | 7.37 |
| KRH03813 | Soybean | nucleus | 62.6 | 5.91 |
| KRH56695 | Soybean | nucleus | 62.6 | 5.91 |
| HORVU5Hr1G061200.9 | Barley | nucleus | 50.38 | 4.68 |
| TraesCS5D01G213200.1 | Wheat | nucleus | 50.38 | 4.67 |
| TraesCS5A01G207000.1 | Wheat | nucleus | 49.62 | 4.62 |
| TraesCS5B01G205400.1 | Wheat | nucleus | 49.62 | 4.6 |
| KXG35610 | Sorghum | nucleus | 34.35 | 3.24 |
| HORVU3Hr1G023590.2 | Barley | mitochondrion | 3.82 | 2.16 |
| Zm00001d020432_P001 | Maize | nucleus | 17.56 | 1.93 |
| PGSC0003DMT400014328 | Potato | nucleus | 6.11 | 1.39 |
| Os09t0410300-01 | Rice | nucleus | 2.29 | 1.34 |
| Os09t0409950-01 | Rice | cytosol, mitochondrion, nucleus | 1.53 | 1.03 |
| GSMUA_Achr3P07300_001 | Banana | nucleus | 3.05 | 0.84 |
| Zm00001d025266_P001 | Maize | cytosol | 0.76 | 0.31 |
| Os09t0410125-00 | Rice | extracellular | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02003576 | EnsemblPlantsGene:GLYMA_06G206500 | GO:GO:0001075 | GO:GO:0001129 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003682 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005669 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0043565 |
| GO:GO:0044212 | GO:GO:0045944 | GO:GO:0051123 | UniProt:K7KWA0 | EnsemblPlants:KRH54756 | ProteinID:KRH54756 |
| ProteinID:KRH54756.1 | PANTHER:PTHR15137 | InterPro:TAF2 | UniParc:UPI0002962235 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:19823006..19824026
Molecular Weight (calculated)
15143.8 Da
IEP (calculated)
5.036
GRAVY (calculated)
0.650
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MINFVAHVIF ILLFFQYNDN NENPYSDLVS LSLGNSILLL SSLLKCIEWL LQFDSLMPSY NGILTISCIR TLTQIALKAF MVHSAYIKEL CQVRIEACIA
101: LLDLEFQYKG MDSTLLLFIK YIEDFAFLKR L
101: LLDLEFQYKG MDSTLLLFIK YIEDFAFLKR L
0001: MEYVGVLKRE DTANLLINCC KPSKDLSEQL DSVTLENGSQ SSGEAKQNVK LIRINYWVEK IESGIHFDGN IVHTDNQMRR ARCWFPCIDD EYHRCSFDLE
0101: FTVPHNFVAV SVGKLLYQVM CKEDTTQKTY VYELAIPIAP RWVSLVAGPL EILPDQTNFL ISNLCLPHDL SRLRNTMEFF HEAYSYYEDY LSANFPFGFY
0201: KQVFLPPEMV VTSSTSGASL SIFSSHILYD ERVIDQTIDT RIKLASALAK QWFGVYITPE SPNDDWLLDG LAGFLTDMFI KQFLGNNEAR YRRYKANCAV
0301: CKADDSGAMC LSSSPSCRDL FGTHSIGMHG KIRSWKSGAV LQMLEKQMGS DSFRKILQKI ISRAKDPSNS IRSLSTKEFR QFANKIGNLE RPFLKEFFQR
0401: WVASYGCPVL RIGLSYNKRK NNVEMAALRE CTAALDARLS VIGATSDSES RDVDAGWPGI MSIRVYELDG MSDHPKLPMA GDRWQLLELP CHSKLAAKRY
0501: QKPKKGGKPD GAEDNVDAIA PLENKTSIES PLAWIKADPE MEYIAEIHLH QPLQMWVNQL EKDGDVVAQA QAIASLEALK QHSFSIVNAL KNVLTDSKVF
0601: WRIRIAAAFA LAKTASEESD WAGLQHLIKF YKSRRFDAEI GLPKPNDFRD FPEYFVLEAI PHAIAIVRGA EGKSPREAVE FILQLLKYND NSGNSYSDVF
0701: WLAVLVQSVG DLEFCQQSLT FLAPLLKRID RLLQFDRLMP SYNGILTISC IRTLAQTALK LSDSISFDHI CKLIEPFRNS DTILQIRIEG SRALLDIEYQ
0801: SKGISSALLL FMKYLVEESS LRGQVKLCVH TMRLCQIAVG CDSDDCVDTV TLLDLLHLFK SHVVFNNELL RYYLFCIFQI LAGRPPTLFG VPKEKPLQLV
0901: DVEACIEPKN VFLVPGAEAG EPSLSALGDA KGQSLDVAPY GVPIIPQEMF MPIVPELMLP EPVAAYDETQ HLEPRMESQN QPSHENPIVH EIPSDVEGPT
1001: EELAHREANP PTKEPQKEPD VVSVSVSHEV KKSVIRIKVR PSGATSRAEG SARTIERSQG IVVRHDIDRG QTSSASVDAP QRISTDAVSI SNQNHVEEVN
1101: SCHDVGSRMT ASIGSVKFAS EGDIFGKELQ CTAESGKPST SQKADNNNRT VPPSFLPLDH SMENEAQQKY ASLQTLSIGK EKEKKKDKEK KEKKRKREDP
1201: VYLEKKRLKK EKKRKEKEMA KLVSSTTDPA KKKIESVAEV KEEEPSDGAM LIKVEPKTEP STAEARPLPK FRIKLKSKAF NNS
0101: FTVPHNFVAV SVGKLLYQVM CKEDTTQKTY VYELAIPIAP RWVSLVAGPL EILPDQTNFL ISNLCLPHDL SRLRNTMEFF HEAYSYYEDY LSANFPFGFY
0201: KQVFLPPEMV VTSSTSGASL SIFSSHILYD ERVIDQTIDT RIKLASALAK QWFGVYITPE SPNDDWLLDG LAGFLTDMFI KQFLGNNEAR YRRYKANCAV
0301: CKADDSGAMC LSSSPSCRDL FGTHSIGMHG KIRSWKSGAV LQMLEKQMGS DSFRKILQKI ISRAKDPSNS IRSLSTKEFR QFANKIGNLE RPFLKEFFQR
0401: WVASYGCPVL RIGLSYNKRK NNVEMAALRE CTAALDARLS VIGATSDSES RDVDAGWPGI MSIRVYELDG MSDHPKLPMA GDRWQLLELP CHSKLAAKRY
0501: QKPKKGGKPD GAEDNVDAIA PLENKTSIES PLAWIKADPE MEYIAEIHLH QPLQMWVNQL EKDGDVVAQA QAIASLEALK QHSFSIVNAL KNVLTDSKVF
0601: WRIRIAAAFA LAKTASEESD WAGLQHLIKF YKSRRFDAEI GLPKPNDFRD FPEYFVLEAI PHAIAIVRGA EGKSPREAVE FILQLLKYND NSGNSYSDVF
0701: WLAVLVQSVG DLEFCQQSLT FLAPLLKRID RLLQFDRLMP SYNGILTISC IRTLAQTALK LSDSISFDHI CKLIEPFRNS DTILQIRIEG SRALLDIEYQ
0801: SKGISSALLL FMKYLVEESS LRGQVKLCVH TMRLCQIAVG CDSDDCVDTV TLLDLLHLFK SHVVFNNELL RYYLFCIFQI LAGRPPTLFG VPKEKPLQLV
0901: DVEACIEPKN VFLVPGAEAG EPSLSALGDA KGQSLDVAPY GVPIIPQEMF MPIVPELMLP EPVAAYDETQ HLEPRMESQN QPSHENPIVH EIPSDVEGPT
1001: EELAHREANP PTKEPQKEPD VVSVSVSHEV KKSVIRIKVR PSGATSRAEG SARTIERSQG IVVRHDIDRG QTSSASVDAP QRISTDAVSI SNQNHVEEVN
1101: SCHDVGSRMT ASIGSVKFAS EGDIFGKELQ CTAESGKPST SQKADNNNRT VPPSFLPLDH SMENEAQQKY ASLQTLSIGK EKEKKKDKEK KEKKRKREDP
1201: VYLEKKRLKK EKKRKEKEMA KLVSSTTDPA KKKIESVAEV KEEEPSDGAM LIKVEPKTEP STAEARPLPK FRIKLKSKAF NNS
Arabidopsis Description
TAF2Transcription initiation factor TFIID subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.