Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G32750.1 | Thale cress | nucleus | 72.54 | 67.74 |
| Bra037541.1-P | Field mustard | nucleus | 64.51 | 65.61 |
| CDY18566 | Canola | nucleus | 62.17 | 64.96 |
| CDX95471 | Canola | nucleus | 62.11 | 64.94 |
| Os06t0645700-01 | Rice | cytosol, nucleus | 2.46 | 61.97 |
| VIT_12s0028g03940.t01 | Wine grape | nucleus | 48.21 | 45.16 |
| Solyc07g006820.2.1 | Tomato | nucleus | 45.76 | 44.98 |
| KRH39697 | Soybean | nucleus | 46.88 | 44.44 |
| KRH62676 | Soybean | nucleus | 46.6 | 44.2 |
| Os06t0645800-01 | Rice | nucleus | 19.98 | 40.68 |
| GSMUA_Achr2P11610_001 | Banana | nucleus | 41.46 | 40.53 |
| EER90111 | Sorghum | nucleus | 39.73 | 39.47 |
| TraesCS7A01G514800.1 | Wheat | nucleus | 39.29 | 39.2 |
| TraesCS7D01G505200.1 | Wheat | nucleus | 39.29 | 39.2 |
| TraesCS7B01G431500.1 | Wheat | nucleus | 39.23 | 39.14 |
| Zm00001d046579_P019 | Maize | nucleus | 39.45 | 39.13 |
| TraesCS7B01G431700.2 | Wheat | nucleus | 37.28 | 37.91 |
| TraesCS7D01G505400.1 | Wheat | nucleus | 37.28 | 37.91 |
| HORVU7Hr1G115120.1 | Barley | plastid | 33.09 | 37.6 |
| TraesCS7A01G515000.1 | Wheat | plastid | 36.44 | 36.64 |
| Os06t0645901-00 | Rice | cytosol, nucleus | 5.36 | 28.32 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.3.4.4.4 | MapMan:15.3.5.3.2 | MapMan:18.4.7.3 | Gene3D:3.10.20.90 | EntrezGene:821437 |
| UniProt:A0A1I9LSR7 | ProteinID:ANM65625.1 | ArrayExpress:AT3G19040 | EnsemblPlantsGene:AT3G19040 | RefSeq:AT3G19040 | TAIR:AT3G19040 |
| RefSeq:AT3G19040-TAIR-G | EnsemblPlants:AT3G19040.2 | Unigene:At.50197 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0016740 |
| InterPro:IPR000626 | InterPro:IPR001487 | InterPro:IPR036427 | RefSeq:NP_001327580.1 | PFAM:PF00240 | PFAM:PF00439 |
| PFAM:PF12157 | PRINTS:PR00503 | ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS50053 | PANTHER:PTHR13900 |
| SMART:SM00213 | SMART:SM00297 | SUPFAM:SSF47370 | SUPFAM:SSF54236 | Symbol:TAF1 | InterPro:TFIID_sub1_DUF3591 |
| UniParc:UPI0008496ACC | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | SEG:seg | : | : |
Description
TAF1Histone acetyltransferase of the TAFII250 family 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSR7]
Coordinates
chr3:-:6567021..6575613
Molecular Weight (calculated)
202826.0 Da
IEP (calculated)
7.368
GRAVY (calculated)
-0.803
Length
1792 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSESNDNETS ADYGSNDEEY DGPELQVVTE EDHLLPKREY LSAAFALSGL NSRASVFDDE DYDEQGGQEK EHVPVEKSFD SEEREPVVLK EEKPVKHEKE
0101: ASILGNKNQM DTGDVQEELV VGLSEATLDE KRVTPLPTLY LEDDGMVILQ FSEIFAIQEP QKKRQKREIR CITYRDKYIS MDISELIEDD EEVLLKSHGR
0201: IDTHGKKTDQ IQLDVPLPIR ERSQLVKSGI VRDTTSESRE FTKLGRDSCI MGELLKQDLK DDNSSLCQSQ LTMEVFPLDQ QEWEHLILWE ISPQFSANCC
0301: EGFKSGLESA GIMVQVRASN SVTEQESLNV MNSGGQTQGD NNNMLEPFFV NPLESFGSRG SQSTNESTNK SRHHPQLLRL ESQWDEDHYR ENGDAGRENL
0401: KQLNSDARGR LSGLALQDRD MWDESWLDSI IWESDKDLSR SKLIFDLQDE QMIFEVPNNK ERKYLQLHAG SRIVSRSSKS KDGSFQEGCG SNSGWQFNIS
0501: NDKFYMNGKS AQKLQGNAKK STVHSLRVFH SAPAIKLQTM KIKLSNKERA NFHRPKALWY PHDNELAIKQ QKILPTQGSM TIVVKSLGGK GSLLTVGREE
0601: SVSSLKAKAS RKLDFKETEA VKMFYMGKEL EDEKSLAEQN VQPNSLVHLL RTKVHLWPWA QKLPGENKSL RPPGAFKKKS DLSNQDGHVF LMEYCEERPL
0701: MLSNAGMGAN LCTYYQKSSP EDQHGNLLRN QSDTLGSVII LEHGNKSPFL GEVHGGCSQS SVETNMYKAP VFPHRLQSTD YLLVRSAKGK LSLRRINKIV
0801: AVGQQEPRME IMSPASKNLH AYLVNRMMAY VYREFKHRDR IAADELSFSF SNISDATVRK YMQVCSDLER DANGKACWSK KRKFDKIPLG LNTLVAPEDV
0901: CSYESMLAGL FRLKHLGITR FTLPASISTA LAQLPDERIA AASHIARELQ ITPWNLSSSF VTCATQGREN IERLEITGVG DPSGRGLGFS YVRVAPKSSA
1001: ASEHKKKKAA ACRGVPTVTG TDADPRRLSM EAAREVLLKF NVPDEIIAKQ TQRHRTAMIR KISSEQAASG GKVGPTTVGM FSRSQRMSFL QLQQQAREMC
1101: HEIWDRQRLS LSACDDDGNE SENEANSDLD SFVGDLEDLL DAEDGGEGEE SNKSMNEKLD GVKGLKMRRW PSQVEKDEEI EDEAAEYVEL CRLLMQDEND
1201: KKKKKLKDVG EGIGSFPPPR SNFEPFIDKK YIATEPDASF LIVNESTVKH TKNVDKATSK SPKDKQVKEI GTPICQMKKI LKENQKVFMG KKTARANFVC
1301: GACGQHGHMK TNKHCPKYRR NTESQPESMD MKKSTGKPSS SDLSGEVWLT PIDNKKPAPK SATKISVNEA TKVGDSTSKT PGSSDVAAVS EIDSGTKLTS
1401: RKLKISSKAK PKASKVESDS PFHSLMPAYS RERGESELHN PSVSGQLLPS TETDQAASSR YTTSVPQPSL SIDKDQAESC RPHRVIWPPT GKEHSQKKLV
1501: IKRLKEITDH DSGSLEETPQ FESRKTKRMA ELADFQRQQR LRLSENFLDW GPKDDRKWRK EQDISTELHR EGKVRRAYDD STVSEERSEI AESRRYREVI
1601: RSEREEEKRR KAKQKKKLQR GILENYPPRR NDGISSESGQ NINSLCVSDF ERNRTEYAPQ PKRRKKGQVG LANILESIVD TLRVKEVNVS YLFLKPVTKK
1701: EAPNYLEIVK CPMDLSTIRD KVRRMEYRDR QQFRHDVWQI KFNAHLYNDG RNLSIPPLAD ELLVKCDRLL DEYRDELKEA EKGIVDSSDS LR
0101: ASILGNKNQM DTGDVQEELV VGLSEATLDE KRVTPLPTLY LEDDGMVILQ FSEIFAIQEP QKKRQKREIR CITYRDKYIS MDISELIEDD EEVLLKSHGR
0201: IDTHGKKTDQ IQLDVPLPIR ERSQLVKSGI VRDTTSESRE FTKLGRDSCI MGELLKQDLK DDNSSLCQSQ LTMEVFPLDQ QEWEHLILWE ISPQFSANCC
0301: EGFKSGLESA GIMVQVRASN SVTEQESLNV MNSGGQTQGD NNNMLEPFFV NPLESFGSRG SQSTNESTNK SRHHPQLLRL ESQWDEDHYR ENGDAGRENL
0401: KQLNSDARGR LSGLALQDRD MWDESWLDSI IWESDKDLSR SKLIFDLQDE QMIFEVPNNK ERKYLQLHAG SRIVSRSSKS KDGSFQEGCG SNSGWQFNIS
0501: NDKFYMNGKS AQKLQGNAKK STVHSLRVFH SAPAIKLQTM KIKLSNKERA NFHRPKALWY PHDNELAIKQ QKILPTQGSM TIVVKSLGGK GSLLTVGREE
0601: SVSSLKAKAS RKLDFKETEA VKMFYMGKEL EDEKSLAEQN VQPNSLVHLL RTKVHLWPWA QKLPGENKSL RPPGAFKKKS DLSNQDGHVF LMEYCEERPL
0701: MLSNAGMGAN LCTYYQKSSP EDQHGNLLRN QSDTLGSVII LEHGNKSPFL GEVHGGCSQS SVETNMYKAP VFPHRLQSTD YLLVRSAKGK LSLRRINKIV
0801: AVGQQEPRME IMSPASKNLH AYLVNRMMAY VYREFKHRDR IAADELSFSF SNISDATVRK YMQVCSDLER DANGKACWSK KRKFDKIPLG LNTLVAPEDV
0901: CSYESMLAGL FRLKHLGITR FTLPASISTA LAQLPDERIA AASHIARELQ ITPWNLSSSF VTCATQGREN IERLEITGVG DPSGRGLGFS YVRVAPKSSA
1001: ASEHKKKKAA ACRGVPTVTG TDADPRRLSM EAAREVLLKF NVPDEIIAKQ TQRHRTAMIR KISSEQAASG GKVGPTTVGM FSRSQRMSFL QLQQQAREMC
1101: HEIWDRQRLS LSACDDDGNE SENEANSDLD SFVGDLEDLL DAEDGGEGEE SNKSMNEKLD GVKGLKMRRW PSQVEKDEEI EDEAAEYVEL CRLLMQDEND
1201: KKKKKLKDVG EGIGSFPPPR SNFEPFIDKK YIATEPDASF LIVNESTVKH TKNVDKATSK SPKDKQVKEI GTPICQMKKI LKENQKVFMG KKTARANFVC
1301: GACGQHGHMK TNKHCPKYRR NTESQPESMD MKKSTGKPSS SDLSGEVWLT PIDNKKPAPK SATKISVNEA TKVGDSTSKT PGSSDVAAVS EIDSGTKLTS
1401: RKLKISSKAK PKASKVESDS PFHSLMPAYS RERGESELHN PSVSGQLLPS TETDQAASSR YTTSVPQPSL SIDKDQAESC RPHRVIWPPT GKEHSQKKLV
1501: IKRLKEITDH DSGSLEETPQ FESRKTKRMA ELADFQRQQR LRLSENFLDW GPKDDRKWRK EQDISTELHR EGKVRRAYDD STVSEERSEI AESRRYREVI
1601: RSEREEEKRR KAKQKKKLQR GILENYPPRR NDGISSESGQ NINSLCVSDF ERNRTEYAPQ PKRRKKGQVG LANILESIVD TLRVKEVNVS YLFLKPVTKK
1701: EAPNYLEIVK CPMDLSTIRD KVRRMEYRDR QQFRHDVWQI KFNAHLYNDG RNLSIPPLAD ELLVKCDRLL DEYRDELKEA EKGIVDSSDS LR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.