Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95471 | Canola | nucleus | 96.09 | 96.15 |
| Bra037541.1-P | Field mustard | nucleus | 95.45 | 92.91 |
| CDY22837 | Canola | cytosol | 3.21 | 73.33 |
| CDY44660 | Canola | nucleus | 74.58 | 69.4 |
| AT3G19040.2 | Thale cress | nucleus | 64.96 | 62.17 |
| CDY49818 | Canola | nucleus | 4.02 | 61.61 |
| CDX84083 | Canola | nucleus | 7.99 | 57.56 |
| KRH39697 | Soybean | nucleus | 51.2 | 46.45 |
| Solyc07g006820.2.1 | Tomato | nucleus | 49.21 | 46.3 |
| KRH62676 | Soybean | nucleus | 50.55 | 45.9 |
| VIT_12s0028g03940.t01 | Wine grape | nucleus | 51.14 | 45.84 |
| GSMUA_Achr2P11610_001 | Banana | nucleus | 45.71 | 42.77 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.3.4.4.4 | MapMan:15.3.5.3.2 | MapMan:18.4.7.3 | Gene3D:3.10.20.90 | UniProt:A0A078FZY2 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | EnsemblPlants:CDY18566 | ProteinID:CDY18566 | ProteinID:CDY18566.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00005608001 | InterPro:IPR000626 |
| InterPro:IPR001487 | InterPro:IPR036427 | PFAM:PF00240 | PFAM:PF00439 | PFAM:PF09247 | PFAM:PF12157 |
| PRINTS:PR00503 | ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS50053 | PANTHER:PTHR13900 | SMART:SM00213 |
| SMART:SM00297 | SUPFAM:SSF47055 | SUPFAM:SSF47370 | SUPFAM:SSF54236 | InterPro:TAFII-230_TBP-bd_sf | InterPro:TAF_II_230-bd |
| InterPro:TFIID_sub1_DUF3591 | UniParc:UPI0004EEB3C8 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | SEG:seg | : |
Description
BnaA01g26290DBnaA01g26290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZY2]
Coordinates
chrLK032086:-:634086..642087
Molecular Weight (calculated)
194762.0 Da
IEP (calculated)
5.857
GRAVY (calculated)
-0.788
Length
1715 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAERNEGSSE DDEEYADRSR GLEFIFGNVD NSGDLDADYL NEDAKEHLSA LASSLPDIML MASSGCTTSD PAEQDYNEKA ADAVDYGDID EEYDGPEVQV
0101: VTEEDHLLPE REYFSSAAAS GSLYSKASVF DDDDYDEEEE QEVEHMPFEE TFDSEDSESV VLKEDNALEY EEEASILGNE ERLDTNEKNA TSLPTLYVED
0201: GMVVLQFSEI FAIHKPPQKR AKRENRYITY RDRYKSMELV EDDEGLLLKS HGRVDTHVKQ ADLIQLDVPL PIRGDLQLPG RDSCTMGELL KQDLQDDKSS
0301: LCQSQSSMEV FPLDQQEWEN RIIWENSPGV SGNSCESFES GIESESLLIQ GTNSETEQES LNVVNSGEQA QAENNKHVSF FVSGLESLGS HTTSESTNKS
0401: RRHPQLLRLE SQWDEDHPSE NDNTGGKNLK QLKRDTVGRF SRLGLQERDM GDDPWLDSII WESDKELTRS KLIFDLQDEQ MVFEIPDNGE SKDLQLHAGS
0501: MILSRSSKPK DKRFQEGCGS NYGFQFNISN DKFYMNGKSC QQLQANANQF GIHSLRVLHS ASAIKLQTMK NKLSNKDIAN FHRPKALWYP HDNELAIKQQ
0601: GKLPTQGSMQ IVVKSLGGKG SRIHVGIEES VSSLKAKASR KLDFKETEAV KIFYMGKELE DEKSLAEQNV HPNSLVHILR TKVHLLPWAQ KLPGEHKSLR
0701: PPGAFKKKSD LSTKDGHVFL MEYCEERPLM LSNAGMGANL CMYYQKLSPA DQHGNLLRDK NDTSGNVMIL EPGEKSPFLG EIQGGCSQSS IETNMYKAPV
0801: FPHKLQSTDY LLVRSSKGKL SLRRIDKTFA VGQQEPRMEV MSPASKNLQT YLVNRMLVYV DREFKHRRRI PADELSFLFS SLSDAVVKKT MRIHGIFLER
0901: DKNGHIFWYK KHRFDKIPHE IELKNLVAPE DVCSYESMLA GLYRLKHLGI TQFTLPASIS TALAQLPDEA IALAAASHIE RELQITPWNL SSNYVACTTQ
1001: DRANIERLEI TGVGDPSGRG LGFSYVRAAP KVPAAAGRMK KKEAACCGAP TVTGTDADLR RLSREAAREV LRKFNVPDEK MAKQNRWHLI AMIRKLSSEQ
1101: AASGVLKVDP TTIGKYARGQ RMSFLQLQQQ AREKCQEIWD RQLLSLSACD DDESESENDM DSFVGDLENL LDAEEWEESN TSKNDKFDGV NGFKMRRRPY
1201: QVVTDEDVED EAAEYAELRR LLMKDDEKRN MNAEFVRKDS VSAKKHIASR PDASFLVTKS SFSKNTTNVS VFKERKPVRD NFFCGACGQP GHMKTNKHCP
1301: KYRSTTEPQP EGIYVKKSSG TPSSSDLSGQ VKLEPIKSKK TAPKSPTKVS VDEAPKGDNP TSKTGGLTLR FKCAIPAGGI ERGESESHRP SVSGQSFSNT
1401: ERNQAASSRL TMSTTQPSLR MDKELVIQRP NEREQPQKKL VIKRSKVITD SLTLSSQFES RKTMRMAEPE GFQSQQRFRL SENSLHRGQK EGRVWQEERE
1501: ISTERNREAR VRRDYADMTK FEKASEIGSE REEKERQKKL QPEVIERYLE GYPRRRNDRK LLERVQKVRS QYVSDFERNV AQYAPQPKRR KKGEVGLANI
1601: LEVIVDTLRA KEVNVSYLFL KPVSKKEAPD YHDVVQRPMD LSTIRDKVRR VEYRDREQFR NDVWQIKYNA HLYNDGRNPM IPPLADELLV KCDGLLERYR
1701: DELTEAEKGI VNLID
0101: VTEEDHLLPE REYFSSAAAS GSLYSKASVF DDDDYDEEEE QEVEHMPFEE TFDSEDSESV VLKEDNALEY EEEASILGNE ERLDTNEKNA TSLPTLYVED
0201: GMVVLQFSEI FAIHKPPQKR AKRENRYITY RDRYKSMELV EDDEGLLLKS HGRVDTHVKQ ADLIQLDVPL PIRGDLQLPG RDSCTMGELL KQDLQDDKSS
0301: LCQSQSSMEV FPLDQQEWEN RIIWENSPGV SGNSCESFES GIESESLLIQ GTNSETEQES LNVVNSGEQA QAENNKHVSF FVSGLESLGS HTTSESTNKS
0401: RRHPQLLRLE SQWDEDHPSE NDNTGGKNLK QLKRDTVGRF SRLGLQERDM GDDPWLDSII WESDKELTRS KLIFDLQDEQ MVFEIPDNGE SKDLQLHAGS
0501: MILSRSSKPK DKRFQEGCGS NYGFQFNISN DKFYMNGKSC QQLQANANQF GIHSLRVLHS ASAIKLQTMK NKLSNKDIAN FHRPKALWYP HDNELAIKQQ
0601: GKLPTQGSMQ IVVKSLGGKG SRIHVGIEES VSSLKAKASR KLDFKETEAV KIFYMGKELE DEKSLAEQNV HPNSLVHILR TKVHLLPWAQ KLPGEHKSLR
0701: PPGAFKKKSD LSTKDGHVFL MEYCEERPLM LSNAGMGANL CMYYQKLSPA DQHGNLLRDK NDTSGNVMIL EPGEKSPFLG EIQGGCSQSS IETNMYKAPV
0801: FPHKLQSTDY LLVRSSKGKL SLRRIDKTFA VGQQEPRMEV MSPASKNLQT YLVNRMLVYV DREFKHRRRI PADELSFLFS SLSDAVVKKT MRIHGIFLER
0901: DKNGHIFWYK KHRFDKIPHE IELKNLVAPE DVCSYESMLA GLYRLKHLGI TQFTLPASIS TALAQLPDEA IALAAASHIE RELQITPWNL SSNYVACTTQ
1001: DRANIERLEI TGVGDPSGRG LGFSYVRAAP KVPAAAGRMK KKEAACCGAP TVTGTDADLR RLSREAAREV LRKFNVPDEK MAKQNRWHLI AMIRKLSSEQ
1101: AASGVLKVDP TTIGKYARGQ RMSFLQLQQQ AREKCQEIWD RQLLSLSACD DDESESENDM DSFVGDLENL LDAEEWEESN TSKNDKFDGV NGFKMRRRPY
1201: QVVTDEDVED EAAEYAELRR LLMKDDEKRN MNAEFVRKDS VSAKKHIASR PDASFLVTKS SFSKNTTNVS VFKERKPVRD NFFCGACGQP GHMKTNKHCP
1301: KYRSTTEPQP EGIYVKKSSG TPSSSDLSGQ VKLEPIKSKK TAPKSPTKVS VDEAPKGDNP TSKTGGLTLR FKCAIPAGGI ERGESESHRP SVSGQSFSNT
1401: ERNQAASSRL TMSTTQPSLR MDKELVIQRP NEREQPQKKL VIKRSKVITD SLTLSSQFES RKTMRMAEPE GFQSQQRFRL SENSLHRGQK EGRVWQEERE
1501: ISTERNREAR VRRDYADMTK FEKASEIGSE REEKERQKKL QPEVIERYLE GYPRRRNDRK LLERVQKVRS QYVSDFERNV AQYAPQPKRR KKGEVGLANI
1601: LEVIVDTLRA KEVNVSYLFL KPVSKKEAPD YHDVVQRPMD LSTIRDKVRR VEYRDREQFR NDVWQIKYNA HLYNDGRNPM IPPLADELLV KCDGLLERYR
1701: DELTEAEKGI VNLID
0001: MAESNGKGSH NETSSDDDDE YEDNSRGFNL GFIFGNVDNS GDLDADYLDE DAKEHLSALA DKLGSSLPDI NLLAKSERTA SDPAEQDYDR KAEDAVDYED
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
Arabidopsis Description
TAF1Transcription initiation factor TFIID subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LRK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.