Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22837 | Canola | cytosol | 4.02 | 98.67 |
| Bra035499.1-P | Field mustard | nucleus | 93.22 | 90.76 |
| CDY49818 | Canola | nucleus | 5.15 | 84.82 |
| CDX84083 | Canola | nucleus | 10.47 | 81.09 |
| AT1G32750.1 | Thale cress | nucleus | 83.02 | 79.73 |
| CDY18566 | Canola | nucleus | 69.4 | 74.58 |
| CDX95471 | Canola | nucleus | 68.8 | 73.98 |
| Solyc07g006820.2.1 | Tomato | nucleus | 50.41 | 50.96 |
| VIT_12s0028g03940.t01 | Wine grape | nucleus | 52.69 | 50.76 |
| KRH39697 | Soybean | nucleus | 51.93 | 50.63 |
| KRH62676 | Soybean | nucleus | 51.0 | 49.76 |
| GSMUA_Achr2P11610_001 | Banana | nucleus | 46.17 | 46.43 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.3.4.4.4 | MapMan:15.3.5.3.2 | MapMan:18.4.7.3 | Gene3D:3.10.20.90 | UniProt:A0A078I1D1 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | InterPro:Bromodomain_CS | EnsemblPlants:CDY44660 | ProteinID:CDY44660 | ProteinID:CDY44660.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00080632001 | InterPro:IPR000626 |
| InterPro:IPR001487 | InterPro:IPR036427 | PFAM:PF00240 | PFAM:PF00439 | PFAM:PF09247 | PFAM:PF12157 |
| PFAM:PF15288 | PRINTS:PR00503 | ScanProsite:PS00633 | PFscan:PS50014 | PFscan:PS50053 | PANTHER:PTHR13900 |
| SMART:SM00213 | SMART:SM00297 | SUPFAM:SSF47055 | SUPFAM:SSF47370 | SUPFAM:SSF54236 | InterPro:TAFII-230_TBP-bd_sf |
| InterPro:TAF_II_230-bd | InterPro:TFIID_sub1_DUF3591 | UniParc:UPI0004EDBBCD | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | SEG:seg |
Description
BnaA08g06800DBnaA08g06800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1D1]
Coordinates
chrLK032598:+:142478..151909
Molecular Weight (calculated)
207618.0 Da
IEP (calculated)
5.037
GRAVY (calculated)
-0.805
Length
1843 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAESNGSHNE TSSDDEEEYE DSNRGFNLGF IFGNVDNSGD LDADYLDEDA KEHLSALADK LGSSLPDINL LAKSDRTSDP AEQDYDRKAE DAVDYEDIDE
0101: QYDGPEVQVV SEEDHLLPKK EYFSTPVALG SLSSRASVFD DDDYDEEEEE QEEEHAPVEK ALETEESEPV VAKEDKTLEY EKEARIFESE DHMDTNGAQE
0201: EEVDELLEGA LDEKGATALP TLYMEDGMVI LQFSEIFAIN EPPQKRDKRE NRYASYNRDK YKSMDISELV EDDEEILLKS HGGIDDDANQ ADLIQLDVPF
0301: PISEGLQLVK SGTIGGITPE SREFSKLGRD SCIMGELLKQ DVIEDDSSLC QSQLSMEVFP LDQHEWEHQI LWENSPETIS GNSCESFESG IESESLLIQG
0401: TNSETEQESL NVVNSGEQAQ AENNKHVSFF VSGLESLGSH TTSESTNKSR RHPQLLRLES QWDEDHPSEN DNTGGKNLKQ LKRDTVGRFS RLGLQERDMG
0501: DDPWLDSIIW ESDKELTRSK LIFDLQDEQM VFEIPDNAES KDLQLHAGSM ILSRSSKPKD KRFQEGCGSN YGFQFNISND KFYMNGKSCQ QLQANANQFG
0601: VHSLRVLHSA SAIRLQTMKN KLSNKDIANF HRPKALWYPH DNELAIKQQG KLPSRGGSMK IVIKSLGGKG SKLHVGIEES VSSLKAKASK KLDFKETEAV
0701: KMFYMGKELE DENSLAVQNV QPNSLVHLVR TKVHLWPLAQ KLPGENKALR PPGAFKRKAD LSTKDGHVFL LEYCEERPLM LSNAGMGANL CTYYQKSSSE
0801: DQRGNLLRNQ SDTLGNVMIL EPGDKSPFLG EIQPGCCQSS VETNMYKAPV FPHRLQSTDY LLVRSPKGKL SLRRIDKIAV VGQQEPRMEV MSPGSKNLQT
0901: YLVNRMLVYV YREFMKSHSI AADELSFLFS NLTDAVVRRN MKLCAGLKRD KNGQPCWYKR PDFQVPPENE LKKLVAPEHV CSYESMLAGL YRLKHLGITR
1001: FTLPASISAA LTQLPDEAIA LAAASHIERE LQITPWNLSS NFVACTNQDR ANIERLEITG VGDPSGRGLG FSFVKAAPKA PAAAGHMKKK AAAGRGAPTV
1101: TGTDADLRRL SMEAAREVLI KFNVPDEIIA KQTRWHRIAM IRKLSSEQAA SGVKVDPTTI GKYARGQRMS FLQMQQQARE KCQEIWDRQL SSLSAYDGDE
1201: NESENEANSD LDSFAGDLEN LLDAEEGGEG EESNISKNDK LDGVKGLKMR RRPSQVETDE EIEDEATEYA ELCRLLMQDE DQKKKKKKIK AVGEGMGSFP
1301: PPRPSIGFQI AEPVRKATFI DENPIATQPD ASFLVNESTV KDTRNWQVDS PILKTPKGKQ VKDNGNSLGP LKKVKILNEN LKVFKEKKSA RENFVCGACG
1401: QYGHMRTNKH CPRYRENTDP QPEGVDMEKS VGKPSTSELS GQAKIKPIKS SKAAPKSAIK VTVDATPKGD SSTSKTGGLP LKFRYGIPAG AMSDTPGSEA
1501: PGSSEQAAPC VSGNQAASSR HTISILQPSL SMDRDQAESR RPHLVIRPPT EREQPQKKLV IKRSKEITDH DMSSLEESPR FESRKTKRMA ELTGFQRQQS
1601: FRVAENSLER RPKEDRVWWD EEEISRRRDY DDMNVTEEPN EIAEIRRYEE VLRSEREEEE RQKAKNKKKK KKMQPELVEG YLEDYPPRRN NNDRRGRNVR
1701: SRYVSDFEMN GADYAPQPKR RKKGEVGLAN ILETIVDTLR LKEEVSGLFL KPVSKKDAPD YFDIVKRPMD LSTIRDKVRK IEYRNREQFR HDVWQIQLNA
1801: HLYNNNGRNP GIPPLADQLL EICDYLLEDY GDQLAEAEKG IDR
0101: QYDGPEVQVV SEEDHLLPKK EYFSTPVALG SLSSRASVFD DDDYDEEEEE QEEEHAPVEK ALETEESEPV VAKEDKTLEY EKEARIFESE DHMDTNGAQE
0201: EEVDELLEGA LDEKGATALP TLYMEDGMVI LQFSEIFAIN EPPQKRDKRE NRYASYNRDK YKSMDISELV EDDEEILLKS HGGIDDDANQ ADLIQLDVPF
0301: PISEGLQLVK SGTIGGITPE SREFSKLGRD SCIMGELLKQ DVIEDDSSLC QSQLSMEVFP LDQHEWEHQI LWENSPETIS GNSCESFESG IESESLLIQG
0401: TNSETEQESL NVVNSGEQAQ AENNKHVSFF VSGLESLGSH TTSESTNKSR RHPQLLRLES QWDEDHPSEN DNTGGKNLKQ LKRDTVGRFS RLGLQERDMG
0501: DDPWLDSIIW ESDKELTRSK LIFDLQDEQM VFEIPDNAES KDLQLHAGSM ILSRSSKPKD KRFQEGCGSN YGFQFNISND KFYMNGKSCQ QLQANANQFG
0601: VHSLRVLHSA SAIRLQTMKN KLSNKDIANF HRPKALWYPH DNELAIKQQG KLPSRGGSMK IVIKSLGGKG SKLHVGIEES VSSLKAKASK KLDFKETEAV
0701: KMFYMGKELE DENSLAVQNV QPNSLVHLVR TKVHLWPLAQ KLPGENKALR PPGAFKRKAD LSTKDGHVFL LEYCEERPLM LSNAGMGANL CTYYQKSSSE
0801: DQRGNLLRNQ SDTLGNVMIL EPGDKSPFLG EIQPGCCQSS VETNMYKAPV FPHRLQSTDY LLVRSPKGKL SLRRIDKIAV VGQQEPRMEV MSPGSKNLQT
0901: YLVNRMLVYV YREFMKSHSI AADELSFLFS NLTDAVVRRN MKLCAGLKRD KNGQPCWYKR PDFQVPPENE LKKLVAPEHV CSYESMLAGL YRLKHLGITR
1001: FTLPASISAA LTQLPDEAIA LAAASHIERE LQITPWNLSS NFVACTNQDR ANIERLEITG VGDPSGRGLG FSFVKAAPKA PAAAGHMKKK AAAGRGAPTV
1101: TGTDADLRRL SMEAAREVLI KFNVPDEIIA KQTRWHRIAM IRKLSSEQAA SGVKVDPTTI GKYARGQRMS FLQMQQQARE KCQEIWDRQL SSLSAYDGDE
1201: NESENEANSD LDSFAGDLEN LLDAEEGGEG EESNISKNDK LDGVKGLKMR RRPSQVETDE EIEDEATEYA ELCRLLMQDE DQKKKKKKIK AVGEGMGSFP
1301: PPRPSIGFQI AEPVRKATFI DENPIATQPD ASFLVNESTV KDTRNWQVDS PILKTPKGKQ VKDNGNSLGP LKKVKILNEN LKVFKEKKSA RENFVCGACG
1401: QYGHMRTNKH CPRYRENTDP QPEGVDMEKS VGKPSTSELS GQAKIKPIKS SKAAPKSAIK VTVDATPKGD SSTSKTGGLP LKFRYGIPAG AMSDTPGSEA
1501: PGSSEQAAPC VSGNQAASSR HTISILQPSL SMDRDQAESR RPHLVIRPPT EREQPQKKLV IKRSKEITDH DMSSLEESPR FESRKTKRMA ELTGFQRQQS
1601: FRVAENSLER RPKEDRVWWD EEEISRRRDY DDMNVTEEPN EIAEIRRYEE VLRSEREEEE RQKAKNKKKK KKMQPELVEG YLEDYPPRRN NNDRRGRNVR
1701: SRYVSDFEMN GADYAPQPKR RKKGEVGLAN ILETIVDTLR LKEEVSGLFL KPVSKKDAPD YFDIVKRPMD LSTIRDKVRK IEYRNREQFR HDVWQIQLNA
1801: HLYNNNGRNP GIPPLADQLL EICDYLLEDY GDQLAEAEKG IDR
0001: MAESNGKGSH NETSSDDDDE YEDNSRGFNL GFIFGNVDNS GDLDADYLDE DAKEHLSALA DKLGSSLPDI NLLAKSERTA SDPAEQDYDR KAEDAVDYED
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
0101: IDEEYDGPEV QVVSEEDHLL PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL EYEEEASILD KEDHMDTEDV
0201: QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP
0301: FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG
0401: TNSETEQESL NVVNSRVQVQ ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK IKRLEKDALG RFSRLVLRER
0501: DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN
0601: KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE
0701: AVKMFYKGKE LDDEKSLAAQ NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP LMLSNAGMGA NLCTYYQKSS
0801: PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL
0901: QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK
1001: HLGITRFTLP ASISNALAQL PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV RAAPKAPAAA GHMKKKAAAG
1101: RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS
1201: AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE
1301: GMGSYPPPRP NIALQSGEPV RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL NENLKVFKEK KSARENFVCG
1401: ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV
1501: SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD
1601: QAESRRPHLV IRPPTEREQP QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED RVWWEEEEIS TGRHREVRAR
1701: RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE
1801: VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL
1901: LDDYEDQLKE AEKGIDPND
Arabidopsis Description
TAF1Transcription initiation factor TFIID subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LRK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.