Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0172600-00 | Rice | nucleus | 48.45 | 75.81 |
| Solyc12g008700.1.1 | Tomato | endoplasmic reticulum, unclear | 48.45 | 75.81 |
| Zm00001d018410_P001 | Maize | plastid | 48.45 | 75.81 |
| KRH28081 | Soybean | cytosol, mitochondrion | 47.42 | 61.33 |
| Bra031096.1-P | Field mustard | cytosol, plastid | 45.36 | 55.0 |
| GSMUA_Achr4P08640_001 | Banana | nucleus | 20.62 | 47.62 |
| GSMUA_Achr4P00880_001 | Banana | nucleus | 45.36 | 43.56 |
| GSMUA_Achr6P35760_001 | Banana | cytosol | 10.31 | 40.0 |
Protein Annotations
| MapMan:17.1.3.1.32 | EnsemblPlantsGene:Bra039017 | EnsemblPlants:Bra039017.1 | EnsemblPlants:Bra039017.1-P | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0030529 | UniProt:M4FD47 | PFAM:PF04758 | PANTHER:PTHR12650 | PANTHER:PTHR12650:SF15 | InterPro:Ribosomal_S30 |
| UniParc:UPI0002541003 | SEG:seg | : | : | : | : |
Description
AT4G29390 (E=2e-015) | 40S ribosomal protein S30 (RPS30B)
Coordinates
chrA07:-:790010..790706
Molecular Weight (calculated)
10747.4 Da
IEP (calculated)
12.459
GRAVY (calculated)
-0.474
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MGKVHGSLAR AGKVRGQTPK VAKQDKKKKP RGRAHKRLQH NRRFVTAALA LVAMAQSEVL RCPHRLDTSR QGNIHKALAL SAFLLTSMAT KALPYRI
1: MGKVHGSLAR AGKVRGQTPK VAKQDKKKKP RGRAHKRLQH NRRFVTAVVG FGKKRGPNSS EK
Arabidopsis Description
RPS30A40S ribosomal protein S30 [Source:UniProtKB/Swiss-Prot;Acc:P49689]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.