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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • extracellular 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02730 Canola endoplasmic reticulum, extracellular, vacuole 47.62 100.0
Bra023599.1-P Field mustard plasma membrane 82.78 94.96
CDX92034 Canola endoplasmic reticulum, extracellular, plasma membrane 42.12 88.46
CDX74224 Canola endoplasmic reticulum, extracellular, vacuole 41.76 87.69
KRH41659 Soybean nucleus 41.76 87.69
VIT_01s0011g05590.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 41.76 87.69
CDY43146 Canola endoplasmic reticulum, extracellular, vacuole 41.76 87.69
CDY28742 Canola endoplasmic reticulum, extracellular, vacuole 41.39 86.92
KRH60355 Soybean nucleus 41.39 86.92
CDX69398 Canola extracellular, plasma membrane 40.29 84.62
Solyc04g014490.1.1 Tomato nucleus 39.56 82.44
PGSC0003DMT400060734 Potato endoplasmic reticulum, extracellular, vacuole 39.56 82.44
Solyc11g011010.1.1 Tomato endoplasmic reticulum, extracellular, vacuole 38.1 80.0
PGSC0003DMT400040457 Potato endoplasmic reticulum, extracellular, vacuole 38.1 80.0
PGSC0003DMT400075817 Potato endoplasmic reticulum, golgi 14.29 76.47
Zm00001d017956_P001 Maize endoplasmic reticulum, extracellular, vacuole 36.63 75.76
EES07301 Sorghum endoplasmic reticulum, extracellular, plasma membrane 36.26 75.0
Solyc04g007920.1.1 Tomato endoplasmic reticulum, extracellular, vacuole 35.9 74.81
Os02t0734900-01 Rice plastid 35.9 74.24
GSMUA_Achr6P04330_001 Banana endoplasmic reticulum, extracellular, vacuole 35.16 73.85
TraesCS6A01G297400.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.53 73.48
TraesCS6B01G327100.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.53 73.48
TraesCS6D01G277300.1 Wheat endoplasmic reticulum, extracellular, vacuole 35.53 73.48
Zm00001d051803_P001 Maize endoplasmic reticulum, extracellular, vacuole 34.43 71.21
GSMUA_Achr5P24620_001 Banana endoplasmic reticulum, extracellular, vacuole 31.87 70.73
GSMUA_Achr7P12460_001 Banana endoplasmic reticulum, extracellular, plasma membrane 32.6 67.94
HORVU6Hr1G073910.1 Barley cytosol, plastid 37.0 51.27
CDX75929 Canola plasma membrane 13.19 38.71
CDY46882 Canola endoplasmic reticulum, extracellular, plasma membrane 17.58 37.21
CDY41829 Canola endoplasmic reticulum, extracellular, plasma membrane 17.58 37.21
CDX77312 Canola endoplasmic reticulum, extracellular, plasma membrane 17.58 37.21
CDY71089 Canola endoplasmic reticulum, extracellular, plasma membrane 17.22 36.43
CDX95822 Canola endoplasmic reticulum, extracellular, plasma membrane 16.85 35.66
CDX75934 Canola endoplasmic reticulum, extracellular, plasma membrane 16.85 35.66
CDX75928 Canola endoplasmic reticulum, extracellular, plasma membrane 16.85 35.66
CDX92160 Canola endoplasmic reticulum, extracellular, plasma membrane 16.48 34.88
CDX82347 Canola endoplasmic reticulum, extracellular, vacuole 16.48 34.88
Protein Annotations
EnsemblPlants:CDX85472EnsemblPlantsGene:GSBRNA2T00143170001GO:A0A078D8P7GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0006810GO:GO:0006886GO:GO:0008150GO:GO:0016020
GO:GO:0016021InterPro:BAP29/BAP31ncoils:CoilPANTHER:PTHR12701PANTHER:PTHR12701:SF12ProteinID:CDX85472
ProteinID:CDX85472.1TMHMM:TMhelixUniParc:UPI0004EDBED7MapMan:35.2::
Description
BnaA02g03410D
Coordinates
chrLK031842:-:249400..251425
Molecular Weight (calculated)
30995.3 Da
IEP (calculated)
10.031
GRAVY (calculated)
-0.046
Length
273 amino acids
Sequence
(BLAST)
001: MVQPRLFGQS TNHQLVLSWK PIINPNLTIS LNISLFLLQA RVTYICLDCG FIYILPKPFD EKPDPQCIAP KKRFVRYDMN TGKAIGGGLP HIGAHQNLDA
101: PRASPSVHLP PPFSSNQITK QRPKLAHEEK KIAESDLNRK PSPMALEWVV LGYAAAAEAI MVILLTMPGL DALRKGLIAV TRNLLKPFLS IIPFCLFLLM
201: DIYWKYETRP SCDGDSCTPS EHLRHQKSIM KSQRNALLIA SALVFYWILY SVTNLVVRIE QLNQRVERLR KRE
Best Arabidopsis Sequence Match ( AT5G17190.1 )
(BLAST)
001: MALEWVVLGY AAAAEAIMVI LLTMPGLDAL RKGLVAVTRN LLKPFLSIIP FCLFLLMDIY WKYETRPSCD GDSCTPSEHL RHQKSIMKSQ RNALLIASAL
101: VFYWILYSVT NLVVRIEQLN QRVERLKNKD
Arabidopsis Description
B-cell receptor-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ0]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.