Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G17190.1 | CDY03088 | AT2G01950.1 | 19000166 |
AT5G17190.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra008573.1-P | Field mustard | extracellular, plasma membrane | 99.23 | 99.23 |
CDY02730 | Canola | endoplasmic reticulum, extracellular, vacuole | 84.62 | 84.62 |
AT5G17190.1 | Thale cress | endoplasmic reticulum, extracellular | 83.08 | 83.08 |
VIT_01s0011g05590.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 78.46 | 78.46 |
CDX92034 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 78.46 | 78.46 |
KRH60355 | Soybean | nucleus | 78.46 | 78.46 |
KRH41659 | Soybean | nucleus | 78.46 | 78.46 |
CDX74224 | Canola | endoplasmic reticulum, extracellular, vacuole | 77.69 | 77.69 |
CDY43146 | Canola | endoplasmic reticulum, extracellular, vacuole | 77.69 | 77.69 |
CDY28742 | Canola | endoplasmic reticulum, extracellular, vacuole | 76.92 | 76.92 |
PGSC0003DMT400075817 | Potato | endoplasmic reticulum, golgi | 29.23 | 74.51 |
Solyc04g014490.1.1 | Tomato | nucleus | 72.31 | 71.76 |
PGSC0003DMT400060734 | Potato | endoplasmic reticulum, extracellular, vacuole | 72.31 | 71.76 |
Zm00001d017956_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 72.31 | 71.21 |
EES07301 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 71.54 | 70.45 |
Solyc11g011010.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 69.23 | 69.23 |
PGSC0003DMT400040457 | Potato | endoplasmic reticulum, extracellular, vacuole | 69.23 | 69.23 |
Os02t0734900-01 | Rice | plastid | 70.0 | 68.94 |
GSMUA_Achr6P04330_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 68.46 | 68.46 |
GSMUA_Achr5P24620_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 64.62 | 68.29 |
Solyc04g007920.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 68.46 | 67.94 |
TraesCS6D01G277300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 68.46 | 67.42 |
TraesCS6B01G327100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 68.46 | 67.42 |
TraesCS6A01G297400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 68.46 | 67.42 |
Zm00001d051803_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 67.69 | 66.67 |
GSMUA_Achr7P12460_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 64.62 | 64.12 |
HORVU6Hr1G073910.1 | Barley | cytosol, plastid | 68.46 | 45.18 |
CDX85472 | Canola | plasma membrane | 84.62 | 40.29 |
CDX75929 | Canola | plasma membrane | 24.62 | 34.41 |
CDY41829 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.85 | 34.11 |
CDX77312 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.85 | 34.11 |
CDY46882 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.85 | 34.11 |
CDY71089 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.08 | 33.33 |
CDX95822 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.31 | 32.56 |
CDX75934 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.31 | 32.56 |
CDX75928 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.31 | 32.56 |
CDX92160 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 31.54 | 31.78 |
CDX82347 | Canola | endoplasmic reticulum, extracellular, vacuole | 31.54 | 31.78 |
Protein Annotations
EnsemblPlants:CDX69398 | EnsemblPlantsGene:GSBRNA2T00135364001 | GO:A0A078C2W5 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 |
GO:GO:0016021 | InterPro:BAP29/BAP31 | ncoils:Coil | PANTHER:PTHR12701 | PANTHER:PTHR12701:SF12 | ProteinID:CDX69398 |
ProteinID:CDX69398.1 | TMHMM:TMhelix | UniParc:UPI0004EE4C54 | MapMan:35.2 | : | : |
Description
BnaA10g17470D
Coordinates
chrLK031790:-:53122..53514
Molecular Weight (calculated)
14920.7 Da
IEP (calculated)
10.280
GRAVY (calculated)
0.354
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKWVVLGY AAAAEAIMVI LLTMPGLDGL RRGLIAVARK LLKPFLAIVP FCFFLLVEIY WKYHTRPSCY GDACTPSDHL RHQKSIVKSQ RNALLIASAL
101: TFYWILYSVT NLVVRIEQLN QRDDRLRNRV
101: TFYWILYSVT NLVVRIEQLN QRDDRLRNRV
001: MALEWVVLGY AAAAEAIMVV LLTMPGLDGL RKGLVAVTRN LLKPFLSIVP FCLFLLMDIY WKYETMPSCD GDSCTPSEHL RHQKSMMKSQ RNALLIAAAL
101: VFYWILYSVT NLVVKIEHLN QRIERLRNKD
101: VFYWILYSVT NLVVKIEHLN QRIERLRNKD
Arabidopsis Description
B-cell receptor-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M9N5]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.