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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • peroxisome 1
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008573.1-P Field mustard extracellular, plasma membrane 99.23 99.23
CDY02730 Canola endoplasmic reticulum, extracellular, vacuole 84.62 84.62
AT5G17190.1 Thale cress endoplasmic reticulum, extracellular 83.08 83.08
VIT_01s0011g05590.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 78.46 78.46
CDX92034 Canola endoplasmic reticulum, extracellular, plasma membrane 78.46 78.46
KRH60355 Soybean nucleus 78.46 78.46
KRH41659 Soybean nucleus 78.46 78.46
CDX74224 Canola endoplasmic reticulum, extracellular, vacuole 77.69 77.69
CDY43146 Canola endoplasmic reticulum, extracellular, vacuole 77.69 77.69
CDY28742 Canola endoplasmic reticulum, extracellular, vacuole 76.92 76.92
PGSC0003DMT400075817 Potato endoplasmic reticulum, golgi 29.23 74.51
Solyc04g014490.1.1 Tomato nucleus 72.31 71.76
PGSC0003DMT400060734 Potato endoplasmic reticulum, extracellular, vacuole 72.31 71.76
Zm00001d017956_P001 Maize endoplasmic reticulum, extracellular, vacuole 72.31 71.21
EES07301 Sorghum endoplasmic reticulum, extracellular, plasma membrane 71.54 70.45
Solyc11g011010.1.1 Tomato endoplasmic reticulum, extracellular, vacuole 69.23 69.23
PGSC0003DMT400040457 Potato endoplasmic reticulum, extracellular, vacuole 69.23 69.23
Os02t0734900-01 Rice plastid 70.0 68.94
GSMUA_Achr6P04330_001 Banana endoplasmic reticulum, extracellular, vacuole 68.46 68.46
GSMUA_Achr5P24620_001 Banana endoplasmic reticulum, extracellular, vacuole 64.62 68.29
Solyc04g007920.1.1 Tomato endoplasmic reticulum, extracellular, vacuole 68.46 67.94
TraesCS6D01G277300.1 Wheat endoplasmic reticulum, extracellular, vacuole 68.46 67.42
TraesCS6B01G327100.1 Wheat endoplasmic reticulum, extracellular, vacuole 68.46 67.42
TraesCS6A01G297400.1 Wheat endoplasmic reticulum, extracellular, vacuole 68.46 67.42
Zm00001d051803_P001 Maize endoplasmic reticulum, extracellular, vacuole 67.69 66.67
GSMUA_Achr7P12460_001 Banana endoplasmic reticulum, extracellular, plasma membrane 64.62 64.12
HORVU6Hr1G073910.1 Barley cytosol, plastid 68.46 45.18
CDX85472 Canola plasma membrane 84.62 40.29
CDX75929 Canola plasma membrane 24.62 34.41
CDY41829 Canola endoplasmic reticulum, extracellular, plasma membrane 33.85 34.11
CDX77312 Canola endoplasmic reticulum, extracellular, plasma membrane 33.85 34.11
CDY46882 Canola endoplasmic reticulum, extracellular, plasma membrane 33.85 34.11
CDY71089 Canola endoplasmic reticulum, extracellular, plasma membrane 33.08 33.33
CDX95822 Canola endoplasmic reticulum, extracellular, plasma membrane 32.31 32.56
CDX75934 Canola endoplasmic reticulum, extracellular, plasma membrane 32.31 32.56
CDX75928 Canola endoplasmic reticulum, extracellular, plasma membrane 32.31 32.56
CDX92160 Canola endoplasmic reticulum, extracellular, plasma membrane 31.54 31.78
CDX82347 Canola endoplasmic reticulum, extracellular, vacuole 31.54 31.78
Protein Annotations
EnsemblPlants:CDX69398EnsemblPlantsGene:GSBRNA2T00135364001GO:A0A078C2W5GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0006810GO:GO:0006886GO:GO:0008150GO:GO:0016020
GO:GO:0016021InterPro:BAP29/BAP31ncoils:CoilPANTHER:PTHR12701PANTHER:PTHR12701:SF12ProteinID:CDX69398
ProteinID:CDX69398.1TMHMM:TMhelixUniParc:UPI0004EE4C54MapMan:35.2::
Description
BnaA10g17470D
Coordinates
chrLK031790:-:53122..53514
Molecular Weight (calculated)
14920.7 Da
IEP (calculated)
10.280
GRAVY (calculated)
0.354
Length
130 amino acids
Sequence
(BLAST)
001: MALKWVVLGY AAAAEAIMVI LLTMPGLDGL RRGLIAVARK LLKPFLAIVP FCFFLLVEIY WKYHTRPSCY GDACTPSDHL RHQKSIVKSQ RNALLIASAL
101: TFYWILYSVT NLVVRIEQLN QRDDRLRNRV
Best Arabidopsis Sequence Match ( AT3G03160.1 )
(BLAST)
001: MALEWVVLGY AAAAEAIMVV LLTMPGLDGL RKGLVAVTRN LLKPFLSIVP FCLFLLMDIY WKYETMPSCD GDSCTPSEHL RHQKSMMKSQ RNALLIAAAL
101: VFYWILYSVT NLVVKIEHLN QRIERLRNKD
Arabidopsis Description
B-cell receptor-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M9N5]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.