Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- peroxisome 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra024839.1-P | |
| Bra024840.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G17190.1 | Bra024839.1-P | AT2G01950.1 | 19000166 |
| AT5G17190.1 | Bra024840.1-P | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69398 | Canola | extracellular, plasma membrane | 99.23 | 99.23 |
| AT5G17190.1 | Thale cress | endoplasmic reticulum, extracellular | 83.85 | 83.85 |
| Bra001074.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 80.0 | 80.0 |
| KRH41659 | Soybean | nucleus | 79.23 | 79.23 |
| VIT_01s0011g05590.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 79.23 | 79.23 |
| KRH60355 | Soybean | nucleus | 79.23 | 79.23 |
| PGSC0003DMT400075817 | Potato | endoplasmic reticulum, golgi | 29.23 | 74.51 |
| Solyc04g014490.1.1 | Tomato | nucleus | 73.08 | 72.52 |
| PGSC0003DMT400060734 | Potato | endoplasmic reticulum, extracellular, vacuole | 73.08 | 72.52 |
| Zm00001d017956_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 71.54 | 70.45 |
| Solyc11g011010.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 70.0 | 70.0 |
| PGSC0003DMT400040457 | Potato | endoplasmic reticulum, extracellular, vacuole | 70.0 | 70.0 |
| EES07301 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 70.77 | 69.7 |
| GSMUA_Achr6P04330_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 69.23 | 69.23 |
| Os02t0734900-01 | Rice | plastid | 70.0 | 68.94 |
| Solyc04g007920.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 69.23 | 68.7 |
| GSMUA_Achr5P24620_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 63.85 | 67.48 |
| TraesCS6D01G277300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 67.69 | 66.67 |
| TraesCS6B01G327100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 67.69 | 66.67 |
| TraesCS6A01G297400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 67.69 | 66.67 |
| Zm00001d051803_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 66.92 | 65.91 |
| GSMUA_Achr7P12460_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 63.85 | 63.36 |
| Bra032012.1-P | Field mustard | plastid | 78.46 | 56.98 |
| Bra023599.1-P | Field mustard | plasma membrane | 85.38 | 46.64 |
| HORVU6Hr1G073910.1 | Barley | cytosol, plastid | 67.69 | 44.67 |
| Bra014138.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 30.77 | 38.46 |
| Bra021273.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 33.85 | 34.11 |
| Bra022243.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 31.54 | 31.78 |
| Bra001681.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 32.31 | 31.58 |
Protein Annotations
| EnsemblPlants:Bra008573.1 | EnsemblPlants:Bra008573.1-P | EnsemblPlantsGene:Bra008573 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:BAP29/BAP31 | ncoils:Coil | PANTHER:PTHR12701 | PANTHER:PTHR12701:SF12 | TMHMM:TMhelix |
| UniParc:UPI00025446A5 | UniProt:M4CWH6 | MapMan:35.2 | : | : | : |
Description
AT5G17190 (E=1e-060) | unknown protein
Coordinates
chrA10:-:12880750..12881142
Molecular Weight (calculated)
14936.7 Da
IEP (calculated)
10.280
GRAVY (calculated)
0.334
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MALKWVVLGY AAAAEAIMVI LLTMPGLDGL RRGLIAVARK LLKPFLAIVP FCFFLLVEIY WKYHTRPSCY GDSCTPSDHL RHQKSIVKSQ RNALLIASAL
101: TFYWILYSVT NLVVRIEQLN QRDDRLRNRV
101: TFYWILYSVT NLVVRIEQLN QRDDRLRNRV
001: MALEWVVLGY AAAAEAIMVI LLTMPGLDAL RKGLVAVTRN LLKPFLSIIP FCLFLLMDIY WKYETRPSCD GDSCTPSEHL RHQKSIMKSQ RNALLIASAL
101: VFYWILYSVT NLVVRIEQLN QRVERLKNKD
101: VFYWILYSVT NLVVRIEQLN QRVERLKNKD
Arabidopsis Description
B-cell receptor-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ0]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.