Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G17190.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT5G17190.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT5G17190.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G277300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 100.0 | 100.0 |
| TraesCS6B01G327100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 100.0 | 100.0 |
| Os02t0734900-01 | Rice | plastid | 95.45 | 95.45 |
| EES07301 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 94.7 | 94.7 |
| Zm00001d017956_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 93.94 | 93.94 |
| Zm00001d051803_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 92.42 | 92.42 |
| GSMUA_Achr6P04330_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 77.27 | 78.46 |
| GSMUA_Achr5P24620_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 71.21 | 76.42 |
| GSMUA_Achr7P12460_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 75.76 | 76.34 |
| KRH41659 | Soybean | nucleus | 74.24 | 75.38 |
| KRH60355 | Soybean | nucleus | 74.24 | 75.38 |
| VIT_01s0011g05590.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 74.24 | 75.38 |
| PGSC0003DMT400060734 | Potato | endoplasmic reticulum, extracellular, vacuole | 74.24 | 74.81 |
| Solyc04g014490.1.1 | Tomato | nucleus | 74.24 | 74.81 |
| PGSC0003DMT400040457 | Potato | endoplasmic reticulum, extracellular, vacuole | 73.48 | 74.62 |
| CDY02730 | Canola | endoplasmic reticulum, extracellular, vacuole | 73.48 | 74.62 |
| Solyc11g011010.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 73.48 | 74.62 |
| VIT_17s0000g02020.t01 | Wine grape | endoplasmic reticulum | 73.48 | 74.05 |
| AT5G17190.1 | Thale cress | endoplasmic reticulum, extracellular | 72.73 | 73.85 |
| CDY43146 | Canola | endoplasmic reticulum, extracellular, vacuole | 72.73 | 73.85 |
| CDY28742 | Canola | endoplasmic reticulum, extracellular, vacuole | 72.73 | 73.85 |
| AT3G03160.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 71.97 | 73.08 |
| CDX74224 | Canola | endoplasmic reticulum, extracellular, vacuole | 71.21 | 72.31 |
| Bra001074.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 71.21 | 72.31 |
| CDX92034 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 70.45 | 71.54 |
| CDX69398 | Canola | extracellular, plasma membrane | 67.42 | 68.46 |
| Bra008573.1-P | Field mustard | extracellular, plasma membrane | 66.67 | 67.69 |
| HORVU6Hr1G073910.1 | Barley | cytosol, plastid | 100.0 | 67.01 |
| Solyc04g007920.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 65.91 | 66.41 |
| PGSC0003DMT400075817 | Potato | endoplasmic reticulum, golgi | 25.0 | 64.71 |
| Bra032012.1-P | Field mustard | plastid | 72.73 | 53.63 |
| Bra023599.1-P | Field mustard | plasma membrane | 73.48 | 40.76 |
| TraesCS4A01G072700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 35.61 | 36.43 |
| CDX85472 | Canola | plasma membrane | 73.48 | 35.53 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G297400.1 | EnsemblPlantsGene:TraesCS6A01G297400 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:BAP29/BAP31 | ncoils:Coil | PANTHER:PTHR12701 | PANTHER:PTHR12701:SF12 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:531000881..531001484
Molecular Weight (calculated)
15101.0 Da
IEP (calculated)
8.850
GRAVY (calculated)
0.327
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEWVVLGY AAGAEAIMLL LLTLPGLDAL RRGMISVVRS ALKPMMSVVP FCLFLLMDIY WKYEMRPTCD DEHACTPSEH LRHQKSIMKS QRNALLIAAA
101: LLLYWILFSV TSLVVKLDHL QQRVDKLKKR DD
101: LLLYWILFSV TSLVVKLDHL QQRVDKLKKR DD
001: MALEWVVLGY AAAAEAIMVI LLTMPGLDAL RKGLVAVTRN LLKPFLSIIP FCLFLLMDIY WKYETRPSCD GDSCTPSEHL RHQKSIMKSQ RNALLIASAL
101: VFYWILYSVT NLVVRIEQLN QRVERLKNKD
101: VFYWILYSVT NLVVRIEQLN QRVERLKNKD
Arabidopsis Description
B-cell receptor-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ0]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.