Factsheet for Bra032012.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43146	Canola	endoplasmic reticulum, extracellular, vacuole	72.63	100.0
CDY28742	Canola	endoplasmic reticulum, extracellular, vacuole	72.07	99.23
Bra001074.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	68.72	94.62
AT3G03160.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	68.72	94.62
VIT_01s0011g05590.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	60.89	83.85
KRH60355	Soybean	nucleus	60.89	83.85
KRH41659	Soybean	nucleus	60.34	83.08
Solyc04g014490.1.1	Tomato	nucleus	59.22	80.92
PGSC0003DMT400060734	Potato	endoplasmic reticulum, extracellular, vacuole	59.22	80.92
Solyc11g011010.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	57.54	79.23
PGSC0003DMT400040457	Potato	endoplasmic reticulum, extracellular, vacuole	57.54	79.23
Bra008573.1-P	Field mustard	extracellular, plasma membrane	56.98	78.46
EES07301	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	54.75	74.24
Zm00001d017956_P001	Maize	endoplasmic reticulum, extracellular, vacuole	54.19	73.48
Os02t0734900-01	Rice	plastid	54.19	73.48
GSMUA_Achr6P04330_001	Banana	endoplasmic reticulum, extracellular, vacuole	53.07	73.08
Zm00001d051803_P001	Maize	endoplasmic reticulum, extracellular, vacuole	53.63	72.73
TraesCS6D01G277300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.63	72.73
TraesCS6B01G327100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.63	72.73
TraesCS6A01G297400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.63	72.73
Solyc04g007920.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	53.07	72.52
PGSC0003DMT400075817	Potato	endoplasmic reticulum, golgi	19.55	68.63
GSMUA_Achr5P24620_001	Banana	endoplasmic reticulum, extracellular, vacuole	46.93	68.29
GSMUA_Achr7P12460_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	49.72	67.94
HORVU6Hr1G073910.1	Barley	cytosol, plastid	55.87	50.76
Bra023599.1-P	Field mustard	plasma membrane	64.25	48.32
Bra014138.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	25.7	44.23
Bra021273.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	27.93	38.76
Bra022243.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	27.37	37.98
Bra001681.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	26.82	36.09

Protein Annotations

EnsemblPlants:Bra032012.1	EnsemblPlants:Bra032012.1-P	EnsemblPlantsGene:Bra032012	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	InterPro:BAP29/BAP31	ncoils:Coil	PANTHER:PTHR12701	PANTHER:PTHR12701:SF12	TMHMM:TMhelix
UniParc:UPI0002546161	UniProt:M4ET82	MapMan:35.2	:	:	:

Description

AT3G03160 (E=3e-068) | unknown protein

Coordinates

chrA02:+:26662384..26662923

Molecular Weight (calculated)

20443.3 Da

IEP (calculated)

9.979

GRAVY (calculated)

0.127

Length

179 amino acids

Sequence
(BLAST)

001: MGCNLSPAHL KSSTSSTTCD TFLNIVSFHF GKFKLRRNRF RSTDLDPRRM ALEWVVLGYA AAAEAIMIVL LTMPGLDGLR KGLVAVTRNL LKPFLSIVPF
101: CLFLLMDIYW KYETMPSCDG DSCTPSEHLR HQKSMMKSQR NAILIAAALV FYWILFSVTH LVVKIEQLNQ RVERLKNKD

Best Arabidopsis Sequence Match ( AT3G03160.1 )
(BLAST)

001: MALEWVVLGY AAAAEAIMVV LLTMPGLDGL RKGLVAVTRN LLKPFLSIVP FCLFLLMDIY WKYETMPSCD GDSCTPSEHL RHQKSMMKSQ RNALLIAAAL
101: VFYWILYSVT NLVVKIEHLN QRIERLRNKD

Arabidopsis Description

B-cell receptor-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M9N5]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.