Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os10t0114400-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G17190.1 | Os10t0114400-01 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07301 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 96.21 | 96.21 |
| Zm00001d017956_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 95.45 | 95.45 |
| TraesCS6D01G277300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 95.45 | 95.45 |
| TraesCS6B01G327100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 95.45 | 95.45 |
| TraesCS6A01G297400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 95.45 | 95.45 |
| Zm00001d051803_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 93.94 | 93.94 |
| GSMUA_Achr6P04330_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 79.55 | 80.77 |
| GSMUA_Achr7P12460_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 75.76 | 76.34 |
| VIT_01s0011g05590.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 75.0 | 76.15 |
| VIT_17s0000g02020.t01 | Wine grape | endoplasmic reticulum | 75.0 | 75.57 |
| KRH60355 | Soybean | nucleus | 74.24 | 75.38 |
| CDY02730 | Canola | endoplasmic reticulum, extracellular, vacuole | 74.24 | 75.38 |
| PGSC0003DMT400060734 | Potato | endoplasmic reticulum, extracellular, vacuole | 74.24 | 74.81 |
| Solyc04g014490.1.1 | Tomato | nucleus | 74.24 | 74.81 |
| GSMUA_Achr5P24620_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 69.7 | 74.8 |
| PGSC0003DMT400040457 | Potato | endoplasmic reticulum, extracellular, vacuole | 73.48 | 74.62 |
| Solyc11g011010.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 73.48 | 74.62 |
| AT5G17190.1 | Thale cress | endoplasmic reticulum, extracellular | 73.48 | 74.62 |
| KRH41659 | Soybean | nucleus | 73.48 | 74.62 |
| CDY43146 | Canola | endoplasmic reticulum, extracellular, vacuole | 73.48 | 74.62 |
| CDY28742 | Canola | endoplasmic reticulum, extracellular, vacuole | 73.48 | 74.62 |
| CDX92034 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 71.97 | 73.08 |
| CDX74224 | Canola | endoplasmic reticulum, extracellular, vacuole | 71.97 | 73.08 |
| Bra001074.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 71.97 | 73.08 |
| AT3G03160.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 71.21 | 72.31 |
| CDX69398 | Canola | extracellular, plasma membrane | 68.94 | 70.0 |
| Bra008573.1-P | Field mustard | extracellular, plasma membrane | 68.94 | 70.0 |
| Solyc04g007920.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 66.67 | 67.18 |
| PGSC0003DMT400075817 | Potato | endoplasmic reticulum, golgi | 25.0 | 64.71 |
| HORVU6Hr1G073910.1 | Barley | cytosol, plastid | 95.45 | 63.96 |
| Bra032012.1-P | Field mustard | plastid | 73.48 | 54.19 |
| Bra023599.1-P | Field mustard | plasma membrane | 74.24 | 41.18 |
| Os03t0240700-01 | Rice | endoplasmic reticulum, extracellular, golgi | 37.12 | 37.98 |
| CDX85472 | Canola | plasma membrane | 74.24 | 35.9 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4330647 | EMBL:AK059269 | ProteinID:BAD15889.1 | ProteinID:BAF09957.1 | InterPro:BAP29/BAP31 |
| ProteinID:BAS80792.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006888 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0070973 | EnsemblPlantsGene:Os02g0734900 | EnsemblPlants:Os02t0734900-01 | PANTHER:PTHR12701 |
| PANTHER:PTHR12701:SF12 | UniProt:Q6Z756 | TMHMM:TMhelix | UniParc:UPI0000358BD3 | RefSeq:XP_015625978.1 | SEG:seg |
Description
Similar to Erwinia induced protein 2. (Os02t0734900-01)
Coordinates
chr2:+:30658440..30659079
Molecular Weight (calculated)
15156.0 Da
IEP (calculated)
8.854
GRAVY (calculated)
0.248
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEWVVLGY AAGAEAIMLL LLTLPGLDGL RRGMISVVRS ALKPMMSVVP FCLFLLMDIY WKYETRPTCD DEHHCTPSEH LRHQKSIMKS QRNALLIAAA
101: LLLYWILFSI TSLVVRLDQL QQRVDKLKKR DD
101: LLLYWILFSI TSLVVRLDQL QQRVDKLKKR DD
001: MALEWVVLGY AAAAEAIMVI LLTMPGLDAL RKGLVAVTRN LLKPFLSIIP FCLFLLMDIY WKYETRPSCD GDSCTPSEHL RHQKSIMKSQ RNALLIASAL
101: VFYWILYSVT NLVVRIEQLN QRVERLKNKD
101: VFYWILYSVT NLVVRIEQLN QRVERLKNKD
Arabidopsis Description
B-cell receptor-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FFJ0]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.