Factsheet for Bra001681.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82347	Canola	endoplasmic reticulum, extracellular, vacuole	94.74	97.67
Bra022243.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	90.98	93.8
Bra021273.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	88.72	91.47
Bra014138.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	71.43	91.35
AT3G17780.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	84.21	86.82
KRH48690	Soybean	endoplasmic reticulum	70.68	72.87
KRH39019	Soybean	endoplasmic reticulum, extracellular, golgi	69.17	71.32
Solyc06g072440.2.1	Tomato	endoplasmic reticulum, extracellular, golgi	65.41	67.44
Solyc03g097970.2.1	Tomato	nucleus	65.41	67.44
Os03t0240700-01	Rice	endoplasmic reticulum, extracellular, golgi	65.41	67.44
PGSC0003DMT400083982	Potato	endoplasmic reticulum, extracellular, golgi	64.66	66.67
PGSC0003DMT400069274	Potato	endoplasmic reticulum, extracellular, golgi	64.66	66.67
GSMUA_Achr8P30800_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	63.91	65.89
VIT_01s0011g06130.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	63.16	65.12
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	62.41	64.34
EER92575	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	57.14	58.91
TraesCS4A01G072700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	54.14	55.81
TraesCS4D01G229700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	54.14	55.81
Zm00001d028375_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	58.65	53.79
HORVU4Hr1G064080.1	Barley	mitochondrion	53.38	39.66
Bra001074.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	33.83	34.62
Bra008573.1-P	Field mustard	extracellular, plasma membrane	31.58	32.31
Bra032012.1-P	Field mustard	plastid	36.09	26.82
TraesCS4B01G228600.1	Wheat	cytosol	38.35	24.88
Bra023599.1-P	Field mustard	plasma membrane	34.59	19.33

Protein Annotations

EnsemblPlants:Bra001681.1	EnsemblPlants:Bra001681.1-P	EnsemblPlantsGene:Bra001681	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	InterPro:BAP29/BAP31	PANTHER:PTHR12701	PANTHER:PTHR12701:SF32	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002540415	UniProt:M4CBV1	MapMan:35.2	:	:	:

Description

AT3G17780 (E=6e-056) | unknown protein

Coordinates

chrA03:+:17841418..17842625

Molecular Weight (calculated)

15560.4 Da

IEP (calculated)

8.554

GRAVY (calculated)

0.428

Length

133 amino acids

Sequence
(BLAST)

001: MALQWLILSY VVAAEVVIAV ILTLPYPMLL KKRIVSLVSL ILQPAASIVA FAGFQLLDLY WKNEHRLMCS SEVCTATERD RYEKSIYKAQ RNVVLCAAGI
101: LLYWCIFRIC KYNKDLDYLE ELEKRCRYYY FGL

Best Arabidopsis Sequence Match ( AT1G48440.1 )
(BLAST)

001: MALQWLILSY VVAVEVVITL VLTLPYPMLL KKRVVQLVSL ILQPAASIVA FAGFQLLDIY WKAEHRLSCS SEVCTATERD RYEKSIYKAQ RNVVLCAAGI
101: LLYWCIYRIC KYNKDLERLE ATEKRFKEE

Arabidopsis Description

At1g48440 [Source:UniProtKB/TrEMBL;Acc:Q8LDS7]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.