Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G229700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 98.45 | 98.45 |
| Os03t0240700-01 | Rice | endoplasmic reticulum, extracellular, golgi | 79.84 | 79.84 |
| EER92575 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 75.97 | 75.97 |
| HORVU4Hr1G064080.1 | Barley | mitochondrion | 96.9 | 69.83 |
| GSMUA_Achr8P30800_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 68.22 | 68.22 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 66.67 | 66.67 |
| Zm00001d028375_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 73.64 | 65.52 |
| Solyc03g097970.2.1 | Tomato | nucleus | 63.57 | 63.57 |
| KRH48690 | Soybean | endoplasmic reticulum | 63.57 | 63.57 |
| VIT_01s0011g06130.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 63.57 | 63.57 |
| PGSC0003DMT400083982 | Potato | endoplasmic reticulum, extracellular, golgi | 62.79 | 62.79 |
| PGSC0003DMT400069274 | Potato | endoplasmic reticulum, extracellular, golgi | 62.79 | 62.79 |
| KRH39019 | Soybean | endoplasmic reticulum, extracellular, golgi | 62.79 | 62.79 |
| Solyc06g072440.2.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 62.02 | 62.02 |
| CDY41829 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 59.69 | 59.69 |
| CDY46882 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 59.69 | 59.69 |
| CDY71089 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 59.69 | 59.69 |
| Bra021273.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 59.69 | 59.69 |
| CDX77312 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.91 | 58.91 |
| Bra022243.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 58.14 | 58.14 |
| CDX75928 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 57.36 | 57.36 |
| CDX95822 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 57.36 | 57.36 |
| CDX92160 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 57.36 | 57.36 |
| CDX82347 | Canola | endoplasmic reticulum, extracellular, vacuole | 57.36 | 57.36 |
| CDX75934 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 57.36 | 57.36 |
| Bra014138.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 45.74 | 56.73 |
| AT3G17780.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 56.59 | 56.59 |
| AT1G48440.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 55.04 | 55.04 |
| Bra001681.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 55.81 | 54.14 |
| CDX75929 | Canola | plasma membrane | 37.98 | 52.69 |
| TraesCS4B01G228600.1 | Wheat | cytosol | 68.99 | 43.41 |
| TraesCS6A01G297400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 36.43 | 35.61 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G072700.1 | EnsemblPlantsGene:TraesCS4A01G072700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:BAP29/BAP31 | PANTHER:PTHR12701 | PANTHER:PTHR12701:SF20 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:71122945..71124867
Molecular Weight (calculated)
14770.4 Da
IEP (calculated)
8.488
GRAVY (calculated)
0.374
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLQWMLLTC VVGAEAAVAA LLTLPAPRAV RAQIVGLTSM LLQPFAAVLP FAAFQLLDIY WKNEHRLICT GEMCTSEERV RFEKSIFKSQ RNVILCVSVF
101: ILYWSIYRIC KFNKDIKALE EVEKRIKDE
101: ILYWSIYRIC KFNKDIKALE EVEKRIKDE
001: MALQWLILSY VVAVEVVITL VLTLPYPMLL KKRVVQLVSL ILQPAASIVA FAGFQLLDIY WKAEHRLSCS SEVCTATERD RYEKSIYKAQ RNVVLCAAGI
101: LLYWCIYRIC KYNKDLERLE ATEKRFKEE
101: LLYWCIYRIC KYNKDLERLE ATEKRFKEE
Arabidopsis Description
At1g48440 [Source:UniProtKB/TrEMBL;Acc:Q8LDS7]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.