Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46882 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 89.92 | 89.92 |
| Bra021273.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 89.92 | 89.92 |
| CDY71089 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 89.15 | 89.15 |
| CDX75928 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 89.15 | 89.15 |
| Bra022243.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 88.37 | 88.37 |
| CDX75934 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 88.37 | 88.37 |
| CDX82347 | Canola | endoplasmic reticulum, extracellular, vacuole | 88.37 | 88.37 |
| CDX95822 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 87.6 | 87.6 |
| CDX92160 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 86.82 | 86.82 |
| CDX75929 | Canola | plasma membrane | 61.24 | 84.95 |
| Bra001681.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 86.82 | 84.21 |
| AT1G48440.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 83.72 | 83.72 |
| KRH48690 | Soybean | endoplasmic reticulum | 68.99 | 68.99 |
| Solyc03g097970.2.1 | Tomato | nucleus | 67.44 | 67.44 |
| PGSC0003DMT400083982 | Potato | endoplasmic reticulum, extracellular, golgi | 66.67 | 66.67 |
| Solyc06g072440.2.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 66.67 | 66.67 |
| KRH39019 | Soybean | endoplasmic reticulum, extracellular, golgi | 65.89 | 65.89 |
| PGSC0003DMT400069274 | Potato | endoplasmic reticulum, extracellular, golgi | 65.89 | 65.89 |
| VIT_01s0011g06130.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 65.12 | 65.12 |
| Os03t0240700-01 | Rice | endoplasmic reticulum, extracellular, golgi | 65.12 | 65.12 |
| GSMUA_Achr8P30800_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 64.34 | 64.34 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 62.79 | 62.79 |
| EER92575 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 57.36 | 57.36 |
| TraesCS4A01G072700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 56.59 | 56.59 |
| TraesCS4D01G229700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 55.81 | 55.81 |
| Zm00001d028375_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 58.14 | 51.72 |
| HORVU4Hr1G064080.1 | Barley | mitochondrion | 55.04 | 39.66 |
| AT3G03160.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 39.53 | 39.23 |
| AT5G17190.1 | Thale cress | endoplasmic reticulum, extracellular | 38.76 | 38.46 |
| TraesCS4B01G228600.1 | Wheat | cytosol | 41.09 | 25.85 |
Protein Annotations
| MapMan:35.2 | EntrezGene:821046 | UniProt:A0A178VBE7 | ProteinID:AEE76006.1 | ArrayExpress:AT3G17780 | EnsemblPlantsGene:AT3G17780 |
| RefSeq:AT3G17780 | TAIR:AT3G17780 | RefSeq:AT3G17780-TAIR-G | EnsemblPlants:AT3G17780.1 | TAIR:AT3G17780.1 | EMBL:AY063848 |
| EMBL:AY117324 | ProteinID:BAB02872.1 | InterPro:BAP29/BAP31 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0006888 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0070973 | RefSeq:NP_188405.1 |
| ProteinID:OAP03640.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12701 | PANTHER:PTHR12701:SF32 | UniProt:Q9LSH0 | TMHMM:TMhelix |
| UniParc:UPI000009FFC1 | SEG:seg | : | : | : | : |
Description
B-cell receptor-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LSH0]
Coordinates
chr3:+:6086909..6088755
Molecular Weight (calculated)
14960.6 Da
IEP (calculated)
8.714
GRAVY (calculated)
0.253
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MALQWLILSY VVAAEVAIAV ILTLPYPMLL KKRIVSLISL ILNPAASIVA FAGFQLLDIY WKNEHRLLCS SEVCTTTERD RHEKSVYKAQ RNGVLCAAGI
101: LLYWCIFRIC KYHKDLERLE QLEKRYKDE
101: LLYWCIFRIC KYHKDLERLE QLEKRYKDE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.