Factsheet for HORVU4Hr1G064080.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G229700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	70.39	97.67
TraesCS4A01G072700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	69.83	96.9
Os03t0240700-01	Rice	endoplasmic reticulum, extracellular, golgi	57.54	79.84
EER92575	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	56.42	78.29
Zm00001d028375_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	54.75	67.59
GSMUA_Achr8P30800_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	48.04	66.67
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	47.49	65.89
VIT_01s0011g06130.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	46.37	64.34
KRH48690	Soybean	endoplasmic reticulum	45.25	62.79
Solyc03g097970.2.1	Tomato	nucleus	44.69	62.02
KRH39019	Soybean	endoplasmic reticulum, extracellular, golgi	44.69	62.02
PGSC0003DMT400083982	Potato	endoplasmic reticulum, extracellular, golgi	44.13	61.24
PGSC0003DMT400069274	Potato	endoplasmic reticulum, extracellular, golgi	44.13	61.24
Solyc06g072440.2.1	Tomato	endoplasmic reticulum, extracellular, golgi	43.58	60.47
CDY46882	Canola	endoplasmic reticulum, extracellular, plasma membrane	42.46	58.91
CDY71089	Canola	endoplasmic reticulum, extracellular, plasma membrane	42.46	58.91
Bra021273.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	42.46	58.91
CDY41829	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.9	58.14
Bra022243.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	41.34	57.36
CDX77312	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.34	57.36
CDX75928	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.78	56.59
CDX95822	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.78	56.59
CDX92160	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.78	56.59
CDX82347	Canola	endoplasmic reticulum, extracellular, vacuole	40.78	56.59
CDX75934	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.78	56.59
Bra014138.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	32.4	55.77
AT3G17780.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	39.66	55.04
AT1G48440.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	39.66	55.04
Bra001681.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	39.66	53.38
CDX75929	Canola	plasma membrane	26.82	51.61
TraesCS4B01G228600.1	Wheat	cytosol	54.75	47.8
HORVU6Hr1G073910.1	Barley	cytosol, plastid	27.37	24.87

Protein Annotations

EnsemblPlants:HORVU4Hr1G064080.1	EnsemblPlantsGene:HORVU4Hr1G064080	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
InterPro:BAP29/BAP31	PANTHER:PTHR12701	PANTHER:PTHR12701:SF20	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B46068D
UniProt:A0A287PDU0	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:537010995..537014533

Molecular Weight (calculated)

20237.8 Da

IEP (calculated)

9.099

GRAVY (calculated)

-0.016

Length

179 amino acids

Sequence
(BLAST)

001: TRLLSTCPSA SERLETRTHF SGLHRSEKPR PAARATSSTS IDPERERGVP MGLQWMLLTC VVGAEAAVAA LVTLPAPRAV RAQIVGLTSM LLQPLAGVLP
101: FAAFQLLDIY WKNEHRLICT GEMCTSEERV RFEKSIFKSQ RNVILCVSVF ILYWSIYRIC KFNKDIKALE EVEKRIKEE

Best Arabidopsis Sequence Match ( AT1G48440.1 )
(BLAST)

001: MALQWLILSY VVAVEVVITL VLTLPYPMLL KKRVVQLVSL ILQPAASIVA FAGFQLLDIY WKAEHRLSCS SEVCTATERD RYEKSIYKAQ RNVVLCAAGI
101: LLYWCIYRIC KYNKDLERLE ATEKRFKEE

Arabidopsis Description

At1g48440 [Source:UniProtKB/TrEMBL;Acc:Q8LDS7]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.