Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 4
- vacuole 3
- plastid 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014336.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 75.3 | 68.23 |
| AT2G01240.1 | Thale cress | extracellular, vacuole | 5.58 | 10.45 |
| CDY40395 | Canola | extracellular | 5.18 | 9.56 |
| CDY37353 | Canola | extracellular, plasma membrane, vacuole | 4.78 | 8.82 |
| CDY37357 | Canola | cytosol, plasma membrane, vacuole | 5.58 | 7.29 |
| CDY40394 | Canola | cytosol, plasma membrane, vacuole | 5.58 | 7.29 |
| CDY40396 | Canola | plasma membrane | 3.59 | 7.26 |
| CDY37356 | Canola | plasma membrane | 3.19 | 4.23 |
Protein Annotations
| EnsemblPlants:CDY06028 | EnsemblPlantsGene:GSBRNA2T00121875001 | GO:A0A078F2Q2 | ProteinID:CDY06028 | ProteinID:CDY06028.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EE3C8D | MapMan:35.2 | : | : | : |
Description
BnaA09g37520D
Coordinates
chrLK031967:-:305594..308079
Molecular Weight (calculated)
28856.8 Da
IEP (calculated)
8.896
GRAVY (calculated)
-0.040
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLFCFVTSP NSSIFFVLLR RCGSVISNVL FLFASIFKNH GESAVLTDGE SKAGRWACRS KERERMSQRI HKLTKELSVE IQVSFFEEAN NAHYNSVSIG
101: YVDEVTSVFI GSCILMGQQP QPQTTYNLSN ASICAFVLTV CVSFNKAFYR ILINGLTIAL SISKFCFWMV RRYKNRDNWL YQPVDQARPE DWSVQFEVRE
201: RQIERYITLN IVCSWVTNGL SLKLKDDLLK LKNPSLESVK TENILAKSLY H
101: YVDEVTSVFI GSCILMGQQP QPQTTYNLSN ASICAFVLTV CVSFNKAFYR ILINGLTIAL SISKFCFWMV RRYKNRDNWL YQPVDQARPE DWSVQFEVRE
201: RQIERYITLN IVCSWVTNGL SLKLKDDLLK LKNPSLESVK TENILAKSLY H
001: METEGRRREV VVSSLQFACS DDISTNVAAA ERLVREAHAK GANIILIQEL FEGYYFCQAQ REDFFKRAKP YKNHPTIARM QKLAKELGVV IPVSFFEEAN
101: TAHYNSIAII DADGTDLGIY RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEILF YPTAIGSEPQ DQGLDSRDHW
201: RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGT SFIAGPTGEI VAEADDKSEA VLVAQFDLDM IKSKRQSWGV FRDRRPDLYK VLLTMDGNL
101: TAHYNSIAII DADGTDLGIY RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEILF YPTAIGSEPQ DQGLDSRDHW
201: RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGT SFIAGPTGEI VAEADDKSEA VLVAQFDLDM IKSKRQSWGV FRDRRPDLYK VLLTMDGNL
Arabidopsis Description
CPAN-carbamoylputrescine amidase [Source:UniProtKB/Swiss-Prot;Acc:Q8VYF5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.