CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 6
endoplasmic reticulum 7
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030448.1-P	Field mustard	endoplasmic reticulum, plasma membrane	100.0	100.0
CDY35563	Canola	plasma membrane	96.01	96.01
CDY03632	Canola	cytosol	3.72	11.11
CDY03630	Canola	plastid	13.56	10.37
CDY29626	Canola	plastid	13.83	10.16
CDY65470	Canola	plastid	13.03	10.0
CDY35562	Canola	plastid	11.97	9.85
CDY03633	Canola	cytosol	4.26	8.94

Protein Annotations

KEGG:00561+2.3.1.51	KEGG:00564+2.3.1.51	MapMan:5.2.1.2.4	GO:A0A078GT39	UniProt:A0A078GT39	InterPro:Acyltransf_C
EnsemblPlants:CDY29625	ProteinID:CDY29625	ProteinID:CDY29625.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746
EnsemblPlantsGene:GSBRNA2T00043374001	PFAM:PF01553	PFAM:PF16076	PANTHER:PTHR10983	PANTHER:PTHR10983:SF26	MetaCyc:PWY-5667
MetaCyc:PWY-5981	MetaCyc:PWY-6453	MetaCyc:PWY-7411	MetaCyc:PWY-7417	MetaCyc:PWY-7587	MetaCyc:PWY-7589
InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	UniPathway:UPA00557	UniParc:UPI0002547AD1
SEG:seg	:	:	:	:	:

Description

BnaA05g15450DBnaA05g15450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GT39]

Coordinates

chrLK032240:-:472089..474194

Molecular Weight (calculated)

43233.3 Da

IEP (calculated)

8.567

GRAVY (calculated)

0.298

Length

376 amino acids

Sequence
(BLAST)

001: MAIPAALVFV PVGVLFLVSG LIVNLIQLVF FIIVRPFSKS LYRRINKNVV ELLWLQLIWL IDWWACIKVN IYADAETLQL LGKEHALVLS NHRSDIDWLI
101: GWVMAQRAGC LGSSLAIMKK EAKYLPIIGW SMWFSDYIFL ERSWDKDEKT LTAGFKRFED FPMTFWLALF VEGTRFTQEK LEAAQEYASI RSLPSPRNVL
201: IPRTKGFVSA VSHIRSFVPA VYDCTLTVRN NQPKPTLLRM FSGQSSELNL QLRRHKMSDL PETDDGIAQW CQDLFITKDA QLETYFTKDV FSDLDVHQIN
301: RPIKPLIVVI VWVCLLMYGG FKLLQWLSMV ASWEIICLFV VILVIATITM QVLIQSSESH RSTPAKRPLQ EQLISA

Best Arabidopsis Sequence Match ( AT1G51260.1 )
(BLAST)

001: MKIPAALVFI PVGVLFLISG LIVNIIQLVF FIIVRPFSRS LYRRINKNVA ELLWLQLIWL FDWWACIKIN LYVDAETLEL IGKEHALVLS NHRSDIDWLI
101: GWVMAQRVGC LGSSLAIMKK EAKYLPIIGW SMWFSDYIFL ERSWAKDENT LKAGFKRLED FPMTFWLALF VEGTRFTQEK LEAAQEYASI RSLPSPRNVL
201: IPRTKGFVSA VSEIRSFVPA IYDCTLTVHN NQPTPTLLRM FSGQSSEINL QMRRHKMSEL PETDDGIAQW CQDLFITKDA QLEKYFTKDV FSDLEVHQIN
301: RPIKPLIVVI IWLGFLVFGG FKLLQWLSIV ASWKIILLFV FFLVIATITM QILIQSSESQ RSTPAKRPLQ EQLISA

Arabidopsis Description

LPAT31-acyl-sn-glycerol-3-phosphate acyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYC8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.