Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44841 | Canola | cytosol | 99.49 | 11.27 |
| CDY69502 | Canola | cytosol | 10.2 | 7.55 |
| CDY38039 | Canola | cytosol | 25.0 | 2.8 |
| CDX89082 | Canola | cytosol | 21.43 | 2.37 |
| CDY51011 | Canola | cytosol | 20.92 | 2.32 |
| CDY59102 | Canola | cytosol, mitochondrion, plastid | 19.39 | 2.24 |
| CDY54791 | Canola | mitochondrion, nucleus, plastid | 18.37 | 2.13 |
| CDX69135 | Canola | plastid | 16.84 | 1.95 |
| CDX75498 | Canola | mitochondrion, plasma membrane, plastid | 16.84 | 1.95 |
| CDX98140 | Canola | cytosol | 10.2 | 1.38 |
| CDY36422 | Canola | cytosol | 10.2 | 1.38 |
| CDY30249 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 9.69 | 1.35 |
| CDX74452 | Canola | cytosol | 9.69 | 1.33 |
| CDX92516 | Canola | cytosol | 8.67 | 1.24 |
| CDY58967 | Canola | cytosol | 8.67 | 1.24 |
| CDY30954 | Canola | extracellular, golgi | 5.1 | 1.2 |
| CDX67432 | Canola | plastid | 9.18 | 1.09 |
Protein Annotations
| EnsemblPlants:CDY30953 | EnsemblPlantsGene:GSBRNA2T00046524001 | InterPro:DCB_dom | PANTHER:PTHR10663 | PANTHER:PTHR10663:SF312 | PFAM:PF16213 |
| ProteinID:CDY30953 | ProteinID:CDY30953.1 | SEG:seg | UniParc:UPI0004EEE183 | UniProt:A0A078H270 | MapMan:35.1 |
Description
BnaA06g19600DBnaA06g19600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H270]
Coordinates
chrLK032264:+:404920..406728
Molecular Weight (calculated)
20498.3 Da
IEP (calculated)
4.765
GRAVY (calculated)
-0.186
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGGFVSRA FETMLKESGG KKFPDLQKAI QAYQDGSKVV TQAASSSIDE RSQAEGEGAK TGGEADEPQK VPSGEVAEQA SQSKSGTINI SLANAGHTLG
101: GAEVELVLKP LRLAFETKNL KIFDAALDCL HKLIAYDHLE GDPGLDGGKN SAPFTEILNM VCSCIDNSSP DSTVLQVLKV LLTAVASGKF KGEPLM
101: GAEVELVLKP LRLAFETKNL KIFDAALDCL HKLIAYDHLE GDPGLDGGKN SAPFTEILNM VCSCIDNSSP DSTVLQVLKV LLTAVASGKF KGEPLM
0001: MAAGGFLTRA FDTMLKESGG KKFPDLQKAI QAYQDGSKVV TQAAPSSIVE SSQAEGGGEK TGVEADEPQK VTSAEVAQQA SQSKSETINV SLANAGHTLG
0101: GAEVELVLKP LRLAFETKNL KIFDAALDCL HKLIAYDHLE GDPGLDGGKN SAPFTDILNM VCSCVDNSSP DSTVLQVLKV LLTAVASGKF KVHGEPLLGV
0201: IRVCYNIALN SKSPINQATS KAMLTQMISI VFRRMETDIV SASSTVSQEE HVSGDTSSPK NEEITAADEN EKEMTLGDAL TQAKDTTLAS VEELHTLVGG
0301: ADIKGLEAAL DKAVHLEDGK KIKRGIELES MSIGQRDALL VFRTLCKMGM KEDSDEVTTK TRILSLELLQ GMLEGVSHSF TKNFHFIDSV KAYLSYALLR
0401: ASVSQSSVIF QYASGIFSVL LLRFRDSLKV SMDCYLSPYF SDPKSHSQGE IGIFFPIIVL RSLDNSECPN DQKMGVLRML EKVCKDPQML VDVYVNYDCD
0501: LEAPNLFERM VTTLSKIAQG SQSADPNPAM ASQTASVKGS SLQCLVNVLK SLVDWEKIRR EAENSTRNAN EDSASTGEPI ETKSREDVPS NFEKAKAHKS
0601: TMEAAISEFN RNSVKGVEYL IANKLVERNP ASVAQFLRST SSLSKVMIGD YLGQHEEFPL AVMHAYVDSM KFSEMKFHSA IREFLKGFRL PGEAQKIDRI
0701: MEKFAERYCA DNPGLFKNAD TAYVLAYAVI MLNTDAHNPM VWPKMSKSDF TRMNATNDPE DCAPTELLEE IYDSIVQEEI KLKDDDTMKK LSSQRPGGEE
0801: RGGLVSILNL GLPKRISAAD AKSETEDIVR KTQEIFRKHG VKRGVFHTVE QVDIIRPMVE AVGWPLLAAF SVTMEVGDNK PRILLCMEGF KAGIHIAYVL
0901: GMDTMRYAFL TSLVRFTFLH APKEMRSKNV EALRILLGLC DSEPDTLQDT WNAVLECVSR LEFIISTPGI AATVMHGSNQ ISRDGVVQSL KELAGRPAEQ
1001: VFVNSVKLPS ESVVEFFTAL CGVSAEELKQ SPARVFSLQK LVEISYYNIA RIRMVWARIW SVLAEHFVSA GSHHDEKIAM YAIDSLRQLG MKYLERAELT
1101: NFTFQNDILK PFVIIMRNTQ SQTIRSLIVD CIVQMIKSKV GSIKSGWRSV FMIFTAAADD EVESIVEKSF ENVEQVILEH FDQVIGDCFM DCVNCLIRFA
1201: NNKASDRISL KAIALLRICE DRLAEGLIPG GVLKPVDGNE DETFDVTEHY WFPMLAGLSD LTSDYRPEVR NCALEVLFDL LNERGNKFST PFWESIFHRI
1301: LFPIFDHVSH AGKESLISSG DVKFRETSIH SLQLLCNLFN TFYKEVCFML PPLLSLLLDC AKKSDQTVVS ISLGALVHLI EVGGHQFSEG DWDMLLKSIR
1401: DASYTTQPLE LLNALSFDNP KKNLVLAGDI EADASDSPRV DRNPDDIKDN GKVSAQASPR IGTHGTSLES GIPPKADGSE GRPSSSGRAQ KDVDDVNLQR
1501: SQTFGQRFMD NLFLRNLTSQ PKSSVAEVTV PSSPYKHEDP TEPDSREEES PALGAIRGKC ITQLLLLGAI NSIQQKYWSN LKTPQKIAIM DILFSFIEFA
1601: SSYNSYSNLR TRMNHIPTER PPLNLLRQEL EGTTIYLDVL QKTTSGLADD ASNSEDRLEG AAEEKLVSFC EQVLKETSDL QSTLGETTNM DVHRVLELRS
1701: PVIVKVLEGM CFMNNTIFRK HMREFYPLLT RLVCCEQMEI RGALANLFKA QLKPLLQQ
0101: GAEVELVLKP LRLAFETKNL KIFDAALDCL HKLIAYDHLE GDPGLDGGKN SAPFTDILNM VCSCVDNSSP DSTVLQVLKV LLTAVASGKF KVHGEPLLGV
0201: IRVCYNIALN SKSPINQATS KAMLTQMISI VFRRMETDIV SASSTVSQEE HVSGDTSSPK NEEITAADEN EKEMTLGDAL TQAKDTTLAS VEELHTLVGG
0301: ADIKGLEAAL DKAVHLEDGK KIKRGIELES MSIGQRDALL VFRTLCKMGM KEDSDEVTTK TRILSLELLQ GMLEGVSHSF TKNFHFIDSV KAYLSYALLR
0401: ASVSQSSVIF QYASGIFSVL LLRFRDSLKV SMDCYLSPYF SDPKSHSQGE IGIFFPIIVL RSLDNSECPN DQKMGVLRML EKVCKDPQML VDVYVNYDCD
0501: LEAPNLFERM VTTLSKIAQG SQSADPNPAM ASQTASVKGS SLQCLVNVLK SLVDWEKIRR EAENSTRNAN EDSASTGEPI ETKSREDVPS NFEKAKAHKS
0601: TMEAAISEFN RNSVKGVEYL IANKLVERNP ASVAQFLRST SSLSKVMIGD YLGQHEEFPL AVMHAYVDSM KFSEMKFHSA IREFLKGFRL PGEAQKIDRI
0701: MEKFAERYCA DNPGLFKNAD TAYVLAYAVI MLNTDAHNPM VWPKMSKSDF TRMNATNDPE DCAPTELLEE IYDSIVQEEI KLKDDDTMKK LSSQRPGGEE
0801: RGGLVSILNL GLPKRISAAD AKSETEDIVR KTQEIFRKHG VKRGVFHTVE QVDIIRPMVE AVGWPLLAAF SVTMEVGDNK PRILLCMEGF KAGIHIAYVL
0901: GMDTMRYAFL TSLVRFTFLH APKEMRSKNV EALRILLGLC DSEPDTLQDT WNAVLECVSR LEFIISTPGI AATVMHGSNQ ISRDGVVQSL KELAGRPAEQ
1001: VFVNSVKLPS ESVVEFFTAL CGVSAEELKQ SPARVFSLQK LVEISYYNIA RIRMVWARIW SVLAEHFVSA GSHHDEKIAM YAIDSLRQLG MKYLERAELT
1101: NFTFQNDILK PFVIIMRNTQ SQTIRSLIVD CIVQMIKSKV GSIKSGWRSV FMIFTAAADD EVESIVEKSF ENVEQVILEH FDQVIGDCFM DCVNCLIRFA
1201: NNKASDRISL KAIALLRICE DRLAEGLIPG GVLKPVDGNE DETFDVTEHY WFPMLAGLSD LTSDYRPEVR NCALEVLFDL LNERGNKFST PFWESIFHRI
1301: LFPIFDHVSH AGKESLISSG DVKFRETSIH SLQLLCNLFN TFYKEVCFML PPLLSLLLDC AKKSDQTVVS ISLGALVHLI EVGGHQFSEG DWDMLLKSIR
1401: DASYTTQPLE LLNALSFDNP KKNLVLAGDI EADASDSPRV DRNPDDIKDN GKVSAQASPR IGTHGTSLES GIPPKADGSE GRPSSSGRAQ KDVDDVNLQR
1501: SQTFGQRFMD NLFLRNLTSQ PKSSVAEVTV PSSPYKHEDP TEPDSREEES PALGAIRGKC ITQLLLLGAI NSIQQKYWSN LKTPQKIAIM DILFSFIEFA
1601: SSYNSYSNLR TRMNHIPTER PPLNLLRQEL EGTTIYLDVL QKTTSGLADD ASNSEDRLEG AAEEKLVSFC EQVLKETSDL QSTLGETTNM DVHRVLELRS
1701: PVIVKVLEGM CFMNNTIFRK HMREFYPLLT RLVCCEQMEI RGALANLFKA QLKPLLQQ
Arabidopsis Description
ATMIN7HOPM interactor 7 [Source:TAIR;Acc:AT3G43300]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.