CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0564700-01	Rice	plasma membrane	21.85	52.91
Bra019446.1-P	Field mustard	cytosol	96.88	46.19
CDY44841	Canola	cytosol	95.08	45.78
AT3G43300.1	Thale cress	cytosol	89.2	42.26
TraesCS2A01G202900.1	Wheat	cytosol	67.83	35.65
KRH19417	Soybean	endoplasmic reticulum	73.59	34.4
KRH02526	Soybean	cytosol	73.59	34.4
VIT_11s0016g00170.t01	Wine grape	cytosol, plastid	73.95	34.28
TraesCS2B01G230000.1	Wheat	cytosol, golgi	68.19	34.22
KXG36486	Sorghum	cytosol	68.91	33.67
Zm00001d006607_P066	Maize	cytosol	69.03	33.51
HORVU2Hr1G040020.14	Barley	cytosol	68.91	33.49
Zm00001d021806_P005	Maize	cytosol	68.91	33.35
TraesCS2D01G212800.2	Wheat	golgi	68.43	33.24
Solyc12g017830.1.1	Tomato	plastid	69.87	32.88
GSMUA_Achr2P14140_001	Banana	cytosol, extracellular, nucleus	68.67	32.48
GSMUA_Achr4P27650_001	Banana	cytosol, extracellular, plastid	69.03	32.03
CDY51011	Canola	cytosol	32.53	15.32
CDX89082	Canola	cytosol	32.41	15.26
CDY38039	Canola	cytosol	30.25	14.38
CDY59102	Canola	cytosol, mitochondrion, plastid	28.69	14.11
CDY54791	Canola	mitochondrion, nucleus, plastid	28.57	14.05
CDX69135	Canola	plastid	27.73	13.68
CDX75498	Canola	mitochondrion, plasma membrane, plastid	27.49	13.57
CDX98140	Canola	cytosol	11.16	6.42
CDY36422	Canola	cytosol	11.16	6.42
CDX74452	Canola	cytosol	10.08	5.86
CDY30249	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	9.84	5.83
CDX92516	Canola	cytosol	8.76	5.32
CDY58967	Canola	cytosol	8.76	5.32
CDY30953	Canola	cytosol	1.2	5.1
CDX67432	Canola	plastid	9.96	5.05
CDY69502	Canola	cytosol	0.24	0.75

Protein Annotations

EnsemblPlants:CDY30954	EnsemblPlantsGene:GSBRNA2T00046525001	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-type_fold	InterPro:Sec7_C
PANTHER:PTHR10663	PANTHER:PTHR10663:SF312	PFAM:PF09324	ProteinID:CDY30954	ProteinID:CDY30954.1	SEG:seg
SUPFAM:SSF48371	TMHMM:TMhelix	UniParc:UPI0004EE19B5	UniProt:A0A078H0L0	MapMan:22.3.3.2	:

Description

BnaA06g19590DBnaA06g19590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0L0]

Coordinates

chrLK032264:+:408419..412753

Molecular Weight (calculated)

93542.5 Da

IEP (calculated)

5.947

GRAVY (calculated)

-0.105

Length

833 amino acids

Sequence
(BLAST)

001: MTKRWVFLGK VLFCSVLSLK RVYYLFFCEF FCEFLFFFAG CLKKSVGSNQ ISRDGVVQSL KELAGRPAEQ VFVNSVKLPS ESVVEFFTAL CGVSAEELKQ
101: SPARVFSLQK LVEISYYNIA RIRMVWARIW SVLAEHFVSA GSHHDEKIAM YAIDSLRQLG MKYLERAELT NFTFQNDILK PFVIIMRNTQ SQTIRSLIVD
201: CIVQMIKSKV GSIKSGWRSV FMIFTAAADD DVESIVEKSF ENVEQVILEH FDQVIGDCFM DCVNCLIRFA NNKASDRISL KAIALLRICE DRLAEGLIPG
301: GVLKPVNTNE DETFDVTEHY WYPMLAGLSD LTSDFRPEVR NCALEVLFDL LNERGKKFST PFWESIFHRI LFPIFDHVSH AGKDGLVSSG DVQFRETSIH
401: SLQLLCNLFN TFYKEVCFML PPLLSLLLDC AKKSDQTVVS ISLGALVHLI EVGGHQFSEG DWDMLLKSIR DASYTTQPLE LLNDLGFDNP NKNLVVTGDI
501: EADATDSPRV DHNPDENGKG SAQASPRVGI HGASQESGIQ PKDDGSEGRP SSSGRSQKEG DDPIIQRSQT FGQRFMDNLF LRNLTSQPKS SAAEVSVPSS
601: PHKQVDPAEP DNREEESPAL GTIRGKCITQ LLLLGAINSI QKKYWSNLKT AQKIAIMDIL FSFIEFAASY NSYSNLRTRM IHISAERPPL NLLRQELEGT
701: NIYMDVLHKT TTGLGDAASD TEDKLEGAAE GKLVSFCEQV LKETSDLQSS LGESTNMDVH RVLELRSPVI VKVLEGMCFM NNKIFRKHMR EFYPLLTRLV
801: CCEQASSTLI KHMDIRGALA NLFTAQLKPL LQQ

Best Arabidopsis Sequence Match ( AT3G43300.3 )
(BLAST)

0001: MAAGGFLTRA FDTMLKESGG KKFPDLQKAI QAYQDGSKVV TQAAPSSIVE SSQAEGGGEK TGVEADEPQK VTSAEVAQQA SQSKSETINV SLANAGHTLG
0101: GAEVELVLKP LRLAFETKNL KIFDAALDCL HKLIAYDHLE GDPGLDGGKN SAPFTDILNM VCSCVDNSSP DSTVLQVLKV LLTAVASGKF KVHGEPLLGV
0201: IRVCYNIALN SKSPINQATS KAMLTQMISI VFRRMETDIV SASSTVSQEE HVSGDTSSPK NEEITAADEN EKEMTLGDAL TQAKDTTLAS VEELHTLVGG
0301: ADIKGLEAAL DKAVHLEDGK KIKRGIELES MSIGQRDALL VFRTLCKMGM KEDSDEVTTK TRILSLELLQ GMLEGVSHSF TKNFHFIDSV KAYLSYALLR
0401: ASVSQSSVIF QYASGIFSVL LLRFRDSLKG EIGIFFPIIV LRSLDNSECP NDQKMGVLRM LEKVCKDPQM LVDVYVNYDC DLEAPNLFER MVTTLSKIAQ
0501: GSQSADPNPA MASQTASVKG SSLQCLVNVL KSLVDWEKIR REAENSTRNA NEDSASTGEP IETKSREDVP SNFEKAKAHK STMEAAISEF NRNSVKGVEY
0601: LIANKLVERN PASVAQFLRS TSSLSKVMIG DYLGQHEEFP LAVMHAYVDS MKFSEMKFHS AIREFLKGFR LPGEAQKIDR IMEKFAERYC ADNPGLFKNA
0701: DTAYVLAYAV IMLNTDAHNP MVWPKMSKSD FTRMNATNDP EDCAPTELLE EIYDSIVQEE IKLKDDDTMK KLSSQRPGGE ERGGLVSILN LGLPKRISAA
0801: DAKSETEDIV RKTQEIFRKH GVKRGVFHTV EQVDIIRPMV EAVGWPLLAA FSVTMEVGDN KPRILLCMEG FKAGIHIAYV LGMDTMRYAF LTSLVRFTFL
0901: HAPKEMRSKN VEALRILLGL CDSEPDTLQD TWNAVLECVS RLEFIISTPG IAATVMHGSN QISRDGVVQS LKELAGRPAE QVFVNSVKLP SESVVEFFTA
1001: LCGVSAEELK QSPARVFSLQ KLVEISYYNI ARIRMVWARI WSVLAEHFVS AGSHHDEKIA MYAIDSLRQL GMKYLERAEL TNFTFQNDIL KPFVIIMRNT
1101: QSQTIRSLIV DCIVQMIKSK VGSIKSGWRS VFMIFTAAAD DEVESIVEKS FENVEQVILE HFDQVIGDCF MDCVNCLIRF ANNKASDRIS LKAIALLRIC
1201: EDRLAEGLIP GGVLKPVDGN EDETFDVTEH YWFPMLAGLS DLTSDYRPEV RNCALEVLFD LLNERGNKFS TPFWESIFHR ILFPIFDHVS HAGKESLISS
1301: GDVKFRETSI HSLQLLCNLF NTFYKEVCFM LPPLLSLLLD CAKKSDQTVV SISLGALVHL IEVGGHQFSE GDWDMLLKSI RDASYTTQPL ELLNALSFDN
1401: PKKNLVLAGD IEADASDSPR VDRNPDDIKD NGKVSAQASP RIGTHGTSLE SGIPPKADGS EGRPSSSGRA QKDVDDVNLQ RSQTFGQRFM DNLFLRNLTS
1501: QPKSSVAEVT VPSSPYKHED PTEPDSREEE SPALGAIRGK CITQLLLLGA INSIQQKYWS NLKTPQKIAI MDILFSFIEF ASSYNSYSNL RTRMNHIPTE
1601: RPPLNLLRQE LEGTTIYLDV LQKTTSGLAD DASNSEDRLE GAAEEKLVSF CEQVLKETSD LQSTLGETTN MDVHRVLELR SPVIVKVLEG MCFMNNTIFR
1701: KHMREFYPLL TRLVCCEQME IRGALANLFK AQLKPLLQQ

Arabidopsis Description

ATMIN7HOPM interactor 7 [Source:TAIR;Acc:AT3G43300]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.