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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
plastid: 22908117
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_11s0016g00170.t01 Wine grape cytosol, plastid 73.95 72.84
KRH19417 Soybean endoplasmic reticulum 72.32 71.83
KRH02526 Soybean cytosol 71.75 71.27
CDY30954 Canola extracellular, golgi 32.88 69.87
CDY44841 Canola cytosol 68.25 69.83
Bra019446.1-P Field mustard cytosol 68.47 69.38
AT3G43300.1 Thale cress cytosol 68.47 68.94
TraesCS2A01G202900.1 Wheat cytosol 61.69 68.9
TraesCS2B01G230000.1 Wheat cytosol, golgi 64.46 68.73
KXG36486 Sorghum cytosol 66.16 68.68
HORVU2Hr1G040020.14 Barley cytosol 66.21 68.38
TraesCS2D01G212800.2 Wheat golgi 65.93 68.05
Zm00001d006607_P066 Maize cytosol 65.71 67.77
Zm00001d021806_P005 Maize cytosol 65.82 67.69
GSMUA_Achr2P14140_001 Banana cytosol, extracellular, nucleus 66.27 66.61
GSMUA_Achr4P27650_001 Banana cytosol, extracellular, plastid 67.01 66.07
Os07t0564700-01 Rice plasma membrane 10.23 52.62
Solyc01g091460.2.1 Tomato extracellular 34.52 34.36
Solyc01g112350.2.1 Tomato extracellular, golgi, plasma membrane 25.93 33.45
Solyc01g112340.2.1 Tomato plastid 4.97 21.05
Solyc05g013040.2.1 Tomato cytosol 15.76 19.25
Solyc04g005560.2.1 Tomato nucleus 15.54 19.06
Solyc02g088290.2.1 Tomato cytosol 15.14 19.01
Solyc02g067010.2.1 Tomato cytosol 14.97 18.3
Solyc03g070470.1.1 Tomato nucleus 13.79 15.93
Protein Annotations
Gene3D:1.10.1000.11Gene3D:1.10.220.20MapMan:22.3.3.2InterPro:ARM-type_foldInterPro:DCB_domGO:GO:0003674
GO:GO:0005086GO:GO:0005488GO:GO:0005515GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987GO:GO:0032012GO:GO:0065009InterPro:IPR000904InterPro:IPR023394UniProt:K4DDB1
InterPro:Mon2_CPFAM:PF01369PFAM:PF09324PFAM:PF12783PFAM:PF16206PFAM:PF16213
PFscan:PS50190PANTHER:PTHR10663PANTHER:PTHR10663:SF312SMART:SM00222SUPFAM:SSF48371SUPFAM:SSF48425
InterPro:Sec7_CInterPro:Sec7_C_sfInterPro:Sec7_NInterPro:Sec7_domInterPro:Sec7_dom_sfEnsemblPlantsGene:Solyc12g017830.1
EnsemblPlants:Solyc12g017830.1.1UniParc:UPI000276958BSEG:seg:::
Description
Brefeldin A-inhibited guanine nucleotide-exchange protein 5 [Source:Projected from Arabidopsis thaliana (AT3G43300) UniProtKB/Swiss-Prot;Acc:F4IXW2]
Coordinates
chr12:+:7453809..7490925
Molecular Weight (calculated)
196308.0 Da
IEP (calculated)
5.117
GRAVY (calculated)
-0.176
Length
1770 amino acids
Sequence
(BLAST)
0001: MAGGAAGGFI TRALESMLKE CSNKKYSALQ IAIQSYIDNS KASSQQSLST ESDAATSSAV DQSSTDTGVS GNEAAPVDST TALPSGEGAE QISRPSNQSG
0101: TIVTALAQAG NTLSQAQAEL VLNPLRLAFE TKNGKIMELA LDCLHKLIAY DHLEGDLGLD GGENVTLFTD ILNRVCGCVD NLSTDSTTLQ VLKVLLTAVA
0201: SAKFRVHGES LLGVIRVCYN IALNSKSPIN QATSKAMLTQ MLSIIFRRME NDLGSRSHGS VAHQETTDTN GPNVKVEEVS HNDPEYKEIT EGGDAPNVVQ
0301: AKDASVASVE ELQSFVGGAD IKGLEAALEK AVHLGDGEKV TKGIELESMS PGEHDALLLF RTLCKMGIKE DNDEVTVKTR ILSLELLQGL LEGVSDSFTK
0401: NFQFMDSVKA YLSYVLLKAS VSQSPAIFQY ATGIFSVLLL RFRECLKGEI GIFFPLIVLR PLDGTDLNAK TSVPRMLEKV CKNSQMLVDL YVNYDCDLQA
0501: PNLFERMVTT LSKIAQGMQS AEPNSVATSQ IASIKASSLQ CLVNVLKSLV EWEKRWSELE RLSNRNQSSE DETFKGDSDK MRDVDDSASN FEKLKAHKST
0601: VEAAISEFNR KPTKGIEHLI SNGLVENSPT SVAQFLKSSP SLDKAMIGDY LGQHEEFPVA VMHAYVDSMN FSGMKFDLAI REFLKGFRLP GEAQKIDRIM
0701: EKFAERYCAD NPGLFKNADI AYILAYAVIM LNTDAHNPLV WPKMSKDDFI RINATDEAED CAPKELLGEI YDSIVQEEIK MKDDPVGLAK SSKQKPEAEE
0801: RGRLVNILNL AQPRRRSSVD PKSESEAIIK QTQAIFRNQG GKRGVFYTSH NTKLVRPMIE ALGWPLLATL AVLMEEGDNK ARVSVCMEGF KAGIHITHVL
0901: GMDTMRYAFL TTLLRLNLLH VPRDMKSKNV EALRTLLAIC DSDAEALQDT WIAVLECISR LEFIVTNPSM ASTVMQGSNQ ISRDALLQSL RELTGKPTEQ
1001: VFVNSVKLPS ESVVEFFSGL CKVSAEELRQ YPARVFSLQK LVEISYYNMA RIRMVWARIW SVLATHFIFA GSHPEEKVAM YAIDSLRQLG MKYLERAELA
1101: NFTFQNDILK PFVVLMRSSR SETIRRLIVD CIVQMIKSKV GSIKSGWRSV FMIFTAAADD ELESIVESAF ENVEQVILEH FDQVVGDCFM DCVNCLIRFA
1201: NNKTSHRISL KAIALLRICE DRLAEGLIPG GALKPVDTTE DETCDVTEHF WFPMLAGLSD LTSDPRPEVR NCALEVLFDL LNERGGKFSS TFWENIFHRV
1301: LFPIFDHVRH AGKENLSSTD EWPRESSIHS LQLLCNLFNT FYKNVCFMLP PLLGLLLDCA QKSDQSVVAI SLGALVHLIE VGGHQFSYND WDTLLESIRN
1401: ASYATQPLEL LNDLGFENSK HQTALHNVTE NGNDGGHSSD VLEDTHGSER PADLEETGGM PSPSGRSEKP TVPEGLDRSQ TIGQKIMGNM MDNRFIRSFT
1501: SKPKIQASDI LPTSPSKLLA DDAEPEAKDE DESSMLATIR SKCITQLLLL SAIDSIQKKY WNKLKPTHKI TIMDILFSVL EFAASYNSYS NLRLRMRQIP
1601: AERPPFNLLR QELAGTSIYL DILQKTTAGI NSVREESTET TVAQSGNSFI NNDATSSDKF QEQGSIKEDK FQQIAEEKLV TFCGQVLREA SEFQSCTTES
1701: ANMDVHQVLE LRSPIIVKVL RGMCSMNSQI FRSHLREFYP LITKLVCCDQ MDVRGSLADL FNMQLNPLLA
Best Arabidopsis Sequence Match ( AT3G43300.3 )
(BLAST)
0001: MAAGGFLTRA FDTMLKESGG KKFPDLQKAI QAYQDGSKVV TQAAPSSIVE SSQAEGGGEK TGVEADEPQK VTSAEVAQQA SQSKSETINV SLANAGHTLG
0101: GAEVELVLKP LRLAFETKNL KIFDAALDCL HKLIAYDHLE GDPGLDGGKN SAPFTDILNM VCSCVDNSSP DSTVLQVLKV LLTAVASGKF KVHGEPLLGV
0201: IRVCYNIALN SKSPINQATS KAMLTQMISI VFRRMETDIV SASSTVSQEE HVSGDTSSPK NEEITAADEN EKEMTLGDAL TQAKDTTLAS VEELHTLVGG
0301: ADIKGLEAAL DKAVHLEDGK KIKRGIELES MSIGQRDALL VFRTLCKMGM KEDSDEVTTK TRILSLELLQ GMLEGVSHSF TKNFHFIDSV KAYLSYALLR
0401: ASVSQSSVIF QYASGIFSVL LLRFRDSLKG EIGIFFPIIV LRSLDNSECP NDQKMGVLRM LEKVCKDPQM LVDVYVNYDC DLEAPNLFER MVTTLSKIAQ
0501: GSQSADPNPA MASQTASVKG SSLQCLVNVL KSLVDWEKIR REAENSTRNA NEDSASTGEP IETKSREDVP SNFEKAKAHK STMEAAISEF NRNSVKGVEY
0601: LIANKLVERN PASVAQFLRS TSSLSKVMIG DYLGQHEEFP LAVMHAYVDS MKFSEMKFHS AIREFLKGFR LPGEAQKIDR IMEKFAERYC ADNPGLFKNA
0701: DTAYVLAYAV IMLNTDAHNP MVWPKMSKSD FTRMNATNDP EDCAPTELLE EIYDSIVQEE IKLKDDDTMK KLSSQRPGGE ERGGLVSILN LGLPKRISAA
0801: DAKSETEDIV RKTQEIFRKH GVKRGVFHTV EQVDIIRPMV EAVGWPLLAA FSVTMEVGDN KPRILLCMEG FKAGIHIAYV LGMDTMRYAF LTSLVRFTFL
0901: HAPKEMRSKN VEALRILLGL CDSEPDTLQD TWNAVLECVS RLEFIISTPG IAATVMHGSN QISRDGVVQS LKELAGRPAE QVFVNSVKLP SESVVEFFTA
1001: LCGVSAEELK QSPARVFSLQ KLVEISYYNI ARIRMVWARI WSVLAEHFVS AGSHHDEKIA MYAIDSLRQL GMKYLERAEL TNFTFQNDIL KPFVIIMRNT
1101: QSQTIRSLIV DCIVQMIKSK VGSIKSGWRS VFMIFTAAAD DEVESIVEKS FENVEQVILE HFDQVIGDCF MDCVNCLIRF ANNKASDRIS LKAIALLRIC
1201: EDRLAEGLIP GGVLKPVDGN EDETFDVTEH YWFPMLAGLS DLTSDYRPEV RNCALEVLFD LLNERGNKFS TPFWESIFHR ILFPIFDHVS HAGKESLISS
1301: GDVKFRETSI HSLQLLCNLF NTFYKEVCFM LPPLLSLLLD CAKKSDQTVV SISLGALVHL IEVGGHQFSE GDWDMLLKSI RDASYTTQPL ELLNALSFDN
1401: PKKNLVLAGD IEADASDSPR VDRNPDDIKD NGKVSAQASP RIGTHGTSLE SGIPPKADGS EGRPSSSGRA QKDVDDVNLQ RSQTFGQRFM DNLFLRNLTS
1501: QPKSSVAEVT VPSSPYKHED PTEPDSREEE SPALGAIRGK CITQLLLLGA INSIQQKYWS NLKTPQKIAI MDILFSFIEF ASSYNSYSNL RTRMNHIPTE
1601: RPPLNLLRQE LEGTTIYLDV LQKTTSGLAD DASNSEDRLE GAAEEKLVSF CEQVLKETSD LQSTLGETTN MDVHRVLELR SPVIVKVLEG MCFMNNTIFR
1701: KHMREFYPLL TRLVCCEQME IRGALANLFK AQLKPLLQQ
Arabidopsis Description
ATMIN7HOPM interactor 7 [Source:TAIR;Acc:AT3G43300]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.