Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003631 | Potato | cytosol | 94.96 | 94.5 |
| Solyc02g067010.2.1 | Tomato | cytosol | 79.43 | 77.35 |
| Solyc04g005560.2.1 | Tomato | nucleus | 65.39 | 63.89 |
| Solyc05g013040.2.1 | Tomato | cytosol | 65.46 | 63.7 |
| CDY30249 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 62.41 | 62.54 |
| Bra040986.1-P | Field mustard | cytosol | 62.55 | 61.55 |
| CDX74452 | Canola | cytosol | 62.55 | 61.55 |
| AT5G39500.1 | Thale cress | cytosol | 62.06 | 60.64 |
| CDX67432 | Canola | plastid | 62.84 | 53.89 |
| Bra028434.1-P | Field mustard | cytosol, plasma membrane, plastid | 62.41 | 52.54 |
| Solyc03g070470.1.1 | Tomato | nucleus | 37.94 | 34.92 |
| Solyc01g112350.2.1 | Tomato | extracellular, golgi, plasma membrane | 17.3 | 17.78 |
| Solyc01g091460.2.1 | Tomato | extracellular | 21.99 | 17.44 |
| Solyc01g112340.2.1 | Tomato | plastid | 4.68 | 15.79 |
| Solyc12g017830.1.1 | Tomato | plastid | 19.01 | 15.14 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005086 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016192 | GO:GO:0032012 | GO:GO:0065009 | InterPro:IPR000904 | InterPro:IPR023394 |
| UniProt:K4BBY5 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 | PANTHER:PTHR44190:SF1 |
| SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom |
| InterPro:Sec7_dom_sf | EnsemblPlantsGene:Solyc02g088290.2 | EnsemblPlants:Solyc02g088290.2.1 | UniParc:UPI00027684E3 | SEG:seg | : |
Description
No Description!
Coordinates
chr2:-:50430914..50436186
Molecular Weight (calculated)
158947.0 Da
IEP (calculated)
6.015
GRAVY (calculated)
-0.016
Length
1410 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFPNQPSGG NTPISEPKDH TIKPSRGALE CMVNSEIGAV LAVMRRNVRW GFRYAAEDDQ LEYSLIQSFK ELRKKIFSWR HEWNNVDPLL YLRPFLDVIQ
0101: SDETGAPITG VALSSVYKFL TLGIIESADM NVDKALHQIV DAVTSCRFEV TDPASEEVVL MKILQVLLAC MKSKASKNLT NHHVCNIVNT CFRLVHQASV
0201: KSELLQRIAR HTMHELVRCI FVHLPDIEKI TIQGMELAHL WLSIQPTGKK QQEDNGCVDV AVGNDQTDEK TRKRDIACNG ENPMMDPHGV PCMVEIFHFL
0301: CSLLNVMESI EIGSRSNPIA YEEDVPLFAL GLINSAIELG GAAFANHPKL LALIREELFH NLMRFGLSMS PLILSTVCSI VLNLYHHLRF KLKLQLEAFF
0401: SGVLLKIAQS KHGASYQLQE VAMETLVDFC RQHMFVAEMY ANYDCDISCS NIFEELANLL SKSTFPVNSP LSALNTLALE GLIAMIQGMA ERIGQDSLVS
0501: DQGSFNLDGF RPFWVEICKD YNDPDHWVPF VHKMKQIKKK LLVGVDHFNR DPKKGMEYLQ AVHLLPDKLD PKSVACFFRF SNGLDKNLVG DFLGSHEEFY
0601: IQVLHEFSRT FDFQDMNLDT ALRIFLETFR LPGESQKIHR VLEAFSERYY EQSPDVLANK DAALVLSYSL IMLNTDQHNT QVKKKMTEED FIRNNRRING
0701: GNDLPREFLS ELYHSICENE IRISSDRGAD TPVLPPSHWI GLVHKSRQTS PFIVCDHGPY LDYDMFAMLS GQTIASISVV LDHVEQEDVW QTCIDGFLAI
0801: AKISASYNFD DVLDDLVVSL CKFTTLLLPS YTDEFIVTFA QDNKARLATL AVFTIANKYG DHIRSGWKNI LECILSLHNF GLLPTRLFND AADDVESTSD
0901: AYKSKPVAAS PSTPHVPSLA PSRKSSGLMG RFSQLLYLDA EEPAPQPNEK QLAALLQAES LSQLVRALVM AAGRPHKGNI SLEDEETAVF CLELLIAITI
1001: NNRDRIMLLW QVVYEHIASI VQSTTMPCSL VEKAVFGVLR ICQRLLPYKE NLTDELLKSL QLILKLDARV ADAFLEQITQ EVMHLVKANA MQIRSNMGWR
1101: TIISLLSITA RHPEASEAGF ETLSFIMADG AHLLPANYIL CLNAASHFAD SRIGSVDQAV RSLDLMAGSL VCLVRWSHKT KDALGEEAAI KMSQDITEMW
1201: LRLVQGLRKF CLDWREEVRG HAILMLQRCL TVVEGIHIST DLWLQCFDQL IFTMLDELLE LAPQGSLKDY RSIEGAIFLS LKLMFKVFLQ SLEHLSQLPS
1301: FCKLWLGLLD HTERCMKMKF KGRRSEKIPE LVPELLKNTL LIMKTSGILM PSDPVGGDSF WQLTWLHVHK ICPSLQSEVF PSSELEQLQK QQIQAGCSPL
1401: SEGSVLVSPS
0101: SDETGAPITG VALSSVYKFL TLGIIESADM NVDKALHQIV DAVTSCRFEV TDPASEEVVL MKILQVLLAC MKSKASKNLT NHHVCNIVNT CFRLVHQASV
0201: KSELLQRIAR HTMHELVRCI FVHLPDIEKI TIQGMELAHL WLSIQPTGKK QQEDNGCVDV AVGNDQTDEK TRKRDIACNG ENPMMDPHGV PCMVEIFHFL
0301: CSLLNVMESI EIGSRSNPIA YEEDVPLFAL GLINSAIELG GAAFANHPKL LALIREELFH NLMRFGLSMS PLILSTVCSI VLNLYHHLRF KLKLQLEAFF
0401: SGVLLKIAQS KHGASYQLQE VAMETLVDFC RQHMFVAEMY ANYDCDISCS NIFEELANLL SKSTFPVNSP LSALNTLALE GLIAMIQGMA ERIGQDSLVS
0501: DQGSFNLDGF RPFWVEICKD YNDPDHWVPF VHKMKQIKKK LLVGVDHFNR DPKKGMEYLQ AVHLLPDKLD PKSVACFFRF SNGLDKNLVG DFLGSHEEFY
0601: IQVLHEFSRT FDFQDMNLDT ALRIFLETFR LPGESQKIHR VLEAFSERYY EQSPDVLANK DAALVLSYSL IMLNTDQHNT QVKKKMTEED FIRNNRRING
0701: GNDLPREFLS ELYHSICENE IRISSDRGAD TPVLPPSHWI GLVHKSRQTS PFIVCDHGPY LDYDMFAMLS GQTIASISVV LDHVEQEDVW QTCIDGFLAI
0801: AKISASYNFD DVLDDLVVSL CKFTTLLLPS YTDEFIVTFA QDNKARLATL AVFTIANKYG DHIRSGWKNI LECILSLHNF GLLPTRLFND AADDVESTSD
0901: AYKSKPVAAS PSTPHVPSLA PSRKSSGLMG RFSQLLYLDA EEPAPQPNEK QLAALLQAES LSQLVRALVM AAGRPHKGNI SLEDEETAVF CLELLIAITI
1001: NNRDRIMLLW QVVYEHIASI VQSTTMPCSL VEKAVFGVLR ICQRLLPYKE NLTDELLKSL QLILKLDARV ADAFLEQITQ EVMHLVKANA MQIRSNMGWR
1101: TIISLLSITA RHPEASEAGF ETLSFIMADG AHLLPANYIL CLNAASHFAD SRIGSVDQAV RSLDLMAGSL VCLVRWSHKT KDALGEEAAI KMSQDITEMW
1201: LRLVQGLRKF CLDWREEVRG HAILMLQRCL TVVEGIHIST DLWLQCFDQL IFTMLDELLE LAPQGSLKDY RSIEGAIFLS LKLMFKVFLQ SLEHLSQLPS
1301: FCKLWLGLLD HTERCMKMKF KGRRSEKIPE LVPELLKNTL LIMKTSGILM PSDPVGGDSF WQLTWLHVHK ICPSLQSEVF PSSELEQLQK QQIQAGCSPL
1401: SEGSVLVSPS
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.