Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g088290.2.1 | Tomato | cytosol | 77.35 | 79.43 |
| Solyc04g005560.2.1 | Tomato | nucleus | 64.43 | 64.66 |
| Solyc05g013040.2.1 | Tomato | cytosol | 63.47 | 63.42 |
| CDY30249 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 60.15 | 61.9 |
| Bra040986.1-P | Field mustard | cytosol | 60.7 | 61.34 |
| CDX74452 | Canola | cytosol | 60.7 | 61.34 |
| AT5G39500.1 | Thale cress | cytosol | 60.01 | 60.22 |
| CDX67432 | Canola | plastid | 60.77 | 53.53 |
| Bra028434.1-P | Field mustard | cytosol, plasma membrane, plastid | 60.36 | 52.18 |
| Solyc03g070470.1.1 | Tomato | nucleus | 36.95 | 34.92 |
| Solyc01g112350.2.1 | Tomato | extracellular, golgi, plasma membrane | 17.27 | 18.22 |
| Solyc01g091460.2.1 | Tomato | extracellular | 22.17 | 18.05 |
| Solyc01g112340.2.1 | Tomato | plastid | 4.7 | 16.27 |
| Solyc12g017830.1.1 | Tomato | plastid | 18.3 | 14.97 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005086 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016192 | GO:GO:0032012 | GO:GO:0065009 | InterPro:IPR000904 | InterPro:IPR023394 |
| UniProt:K4B733 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 | PANTHER:PTHR44190:SF1 |
| SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom |
| InterPro:Sec7_dom_sf | EnsemblPlantsGene:Solyc02g067010.2 | EnsemblPlants:Solyc02g067010.2.1 | UniParc:UPI0002768FF6 | SEG:seg | : |
Description
No Description!
Coordinates
chr2:-:37250787..37256805
Molecular Weight (calculated)
162758.0 Da
IEP (calculated)
5.869
GRAVY (calculated)
-0.043
Length
1448 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGCLNQQSEV NTPFSEPNDC TVKPSKGALA CMVNSEIGAV LAVMRRNVRW GFHYAAADDQ LEHPLIHSFK ELRKNVFSWK HHWNRVDPLL YLQPFLDVIQ
0101: SDETGAPITG VALSSVYKFL TLEIIDSSIM NVEKALYQIV ETVTSCRFEV TDPASEEVVL MKILQVLLAC MKSKASENLS NHHVCNIVNT CFRLVHQASA
0201: KSELLQRIAR HTMHELVRHI FAHLPNIISK AHEFDQQSRL CADSEAGEKQ HDNGCVSAES TGKSAPAAVP SNASDKRDGT TDEKTQKEEI ASNRENPMMD
0301: PYGVPCMVEI FHFLCSLLNV MESIEIGSRS NPIAYDEDVP LFALGLINSA IEVSGASSGN HPELLALIQK DLFHNLMRFG LSMSPLILST VCSIVLNLYH
0401: HMRSKLKLQL GTFFSGVLLR IAQSKYGTYY QQQEVAIETL VDFCRQPMFM PEMYANFDCD ISCSNVFEDL ANLLSKSSFP VNIPLSALNT LALDGLIAMM
0501: EGMAERISQD SFVSDQASID LGEYRSFWTE ICKDYSDPNH WVPYLRKMKV IKRKLLIGVD HFNRDPKKGM DFLQGVHLLP EKRDPKSVAC FFRYTTGLDK
0601: NLIGDFLGSH EDFYIEVLHE FAGTFDFRGM NLDIALRIFL ETFRLPGESQ KIQRVLEAFA ERYYEQSQNI LADKDAALLL SYSIIMLNTD QHNAQVKKKM
0701: TEEDFIRNNR RINGGNDLPR EFLSELYRSI CEDEIRITPD RGAGIPMMAP SHWIGLVHKS RQTSPYIICD PGPYLDYDMF AMLSGPAIAS ISVVFDNVEQ
0801: EDVWETCISG FLAIARIAAA YSFDDVLNDL VVSLCKFTTL LLPSYVDEFT VAFAEDGKAR LATLAVFTLA NEYGDHIRSG WKNILDCILC LHKLGLLPTR
0901: LFSDAADDLE STGDADPRRP TALFPSPSRF PSSTPSRKSS GLMGVFSQLL YLDEEPAPQP NEQQLAARQQ TLQTIQSCHV DSIFAESKFL QAESLLQLVR
1001: AVVLAAGKPR KRNNSLEDEE TAVFCLELLI AITINNRDRI MLLWQVVYDH IASVVHLTTM PSTLIEKAVF GLLRICQRLL PYKENLTDEL LKSLQLILKL
1101: DARVADAFLE QITREVMHLV KANAMQIRSH IGWRTIISLL SFTARHPEAS ETGFDTLVFI MADGAHLLPA NYVLCLNVAA QFADSHVGNV DQSVRSLDLM
1201: AGSLISLIRW SHQAKEALGQ EAAVKMTQDI TEMWLRLIQG LRKFCKDRRE EVRDHAILML QMCLTGVDGI HIPEDLWLQC FDQVIFTLLD ELLNLAQPSF
1301: VKDYRSTEGA IVLALKLMFK MFLQSLNHLS QSTSFCKLWL GVLSLTERCM KVKFKGKWSE KIPELISELL KNTLLVMKTS GILGPSNPVG GDSFWKSTWL
1401: HVHKICPSLQ TEIFPTNEAE QSEKQHIQVG CSPLAEGNVI VSSGNSTA
0101: SDETGAPITG VALSSVYKFL TLEIIDSSIM NVEKALYQIV ETVTSCRFEV TDPASEEVVL MKILQVLLAC MKSKASENLS NHHVCNIVNT CFRLVHQASA
0201: KSELLQRIAR HTMHELVRHI FAHLPNIISK AHEFDQQSRL CADSEAGEKQ HDNGCVSAES TGKSAPAAVP SNASDKRDGT TDEKTQKEEI ASNRENPMMD
0301: PYGVPCMVEI FHFLCSLLNV MESIEIGSRS NPIAYDEDVP LFALGLINSA IEVSGASSGN HPELLALIQK DLFHNLMRFG LSMSPLILST VCSIVLNLYH
0401: HMRSKLKLQL GTFFSGVLLR IAQSKYGTYY QQQEVAIETL VDFCRQPMFM PEMYANFDCD ISCSNVFEDL ANLLSKSSFP VNIPLSALNT LALDGLIAMM
0501: EGMAERISQD SFVSDQASID LGEYRSFWTE ICKDYSDPNH WVPYLRKMKV IKRKLLIGVD HFNRDPKKGM DFLQGVHLLP EKRDPKSVAC FFRYTTGLDK
0601: NLIGDFLGSH EDFYIEVLHE FAGTFDFRGM NLDIALRIFL ETFRLPGESQ KIQRVLEAFA ERYYEQSQNI LADKDAALLL SYSIIMLNTD QHNAQVKKKM
0701: TEEDFIRNNR RINGGNDLPR EFLSELYRSI CEDEIRITPD RGAGIPMMAP SHWIGLVHKS RQTSPYIICD PGPYLDYDMF AMLSGPAIAS ISVVFDNVEQ
0801: EDVWETCISG FLAIARIAAA YSFDDVLNDL VVSLCKFTTL LLPSYVDEFT VAFAEDGKAR LATLAVFTLA NEYGDHIRSG WKNILDCILC LHKLGLLPTR
0901: LFSDAADDLE STGDADPRRP TALFPSPSRF PSSTPSRKSS GLMGVFSQLL YLDEEPAPQP NEQQLAARQQ TLQTIQSCHV DSIFAESKFL QAESLLQLVR
1001: AVVLAAGKPR KRNNSLEDEE TAVFCLELLI AITINNRDRI MLLWQVVYDH IASVVHLTTM PSTLIEKAVF GLLRICQRLL PYKENLTDEL LKSLQLILKL
1101: DARVADAFLE QITREVMHLV KANAMQIRSH IGWRTIISLL SFTARHPEAS ETGFDTLVFI MADGAHLLPA NYVLCLNVAA QFADSHVGNV DQSVRSLDLM
1201: AGSLISLIRW SHQAKEALGQ EAAVKMTQDI TEMWLRLIQG LRKFCKDRRE EVRDHAILML QMCLTGVDGI HIPEDLWLQC FDQVIFTLLD ELLNLAQPSF
1301: VKDYRSTEGA IVLALKLMFK MFLQSLNHLS QSTSFCKLWL GVLSLTERCM KVKFKGKWSE KIPELISELL KNTLLVMKTS GILGPSNPVG GDSFWKSTWL
1401: HVHKICPSLQ TEIFPTNEAE QSEKQHIQVG CSPLAEGNVI VSSGNSTA
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.