Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028434.1-P | Field mustard | cytosol, plasma membrane, plastid | 99.15 | 97.31 |
| CDY30249 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 79.99 | 93.46 |
| CDX74452 | Canola | cytosol | 80.41 | 92.25 |
| AT5G39500.1 | Thale cress | cytosol | 75.49 | 86.0 |
| PGSC0003DMT400003631 | Potato | cytosol | 54.2 | 62.88 |
| Solyc02g088290.2.1 | Tomato | cytosol | 53.89 | 62.84 |
| CDX98140 | Canola | cytosol | 54.99 | 62.43 |
| CDY36422 | Canola | cytosol | 54.93 | 62.32 |
| Solyc02g067010.2.1 | Tomato | cytosol | 53.53 | 60.77 |
| CDY69502 | Canola | cytosol | 9.31 | 57.74 |
| CDX92516 | Canola | cytosol | 31.81 | 38.09 |
| CDY58967 | Canola | cytosol | 31.75 | 38.02 |
| CDY38039 | Canola | cytosol | 18.73 | 17.57 |
| CDX89082 | Canola | cytosol | 18.43 | 17.13 |
| CDX69135 | Canola | plastid | 17.52 | 17.06 |
| CDY51011 | Canola | cytosol | 18.31 | 17.02 |
| CDX75498 | Canola | mitochondrion, plasma membrane, plastid | 17.4 | 16.94 |
| CDY59102 | Canola | cytosol, mitochondrion, plastid | 17.09 | 16.59 |
| CDY54791 | Canola | mitochondrion, nucleus, plastid | 16.73 | 16.23 |
| CDY44841 | Canola | cytosol | 15.51 | 14.74 |
| CDY30954 | Canola | extracellular, golgi | 5.05 | 9.96 |
| CDY30953 | Canola | cytosol | 1.09 | 9.18 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | Gene3D:1.20.5.110 | Gene3D:1.20.58.400 | MapMan:22.3.3.1 | MapMan:22.7.2.1 |
| GO:A0A078BT85 | EnsemblPlants:CDX67432 | ProteinID:CDX67432 | ProteinID:CDX67432.1 | GO:GO:0003674 | GO:GO:0005086 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0032012 |
| EnsemblPlantsGene:GSBRNA2T00098526001 | InterPro:IPR000904 | InterPro:IPR023394 | InterPro:IPR038407 | PFAM:PF01369 | PFAM:PF05008 |
| PFAM:PF12352 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 | PANTHER:PTHR44190:SF1 | SMART:SM00222 |
| InterPro:SNARE | SUPFAM:SSF47661 | SUPFAM:SSF48425 | SUPFAM:SSF58038 | InterPro:Sec7_C_sf | InterPro:Sec7_N |
| InterPro:Sec7_dom | InterPro:Sec7_dom_sf | TMHMM:TMhelix | UniParc:UPI0004EDE606 | InterPro:Vesicle_trsprt_v-SNARE_N | SEG:seg |
| InterPro:v-SNARE_N_sf | : | : | : | : | : |
Description
BnaA07g14720D
Coordinates
chrLK031787:+:192625..199170
Molecular Weight (calculated)
184048.0 Da
IEP (calculated)
5.556
GRAVY (calculated)
-0.082
Length
1644 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEHHPSGSNS FHGGEFKSCH PKPSKVAVAS MINSEIGAVL AVMRRNVRWG VRYIGDDDDQ LEHSLIHSLK ELRKQIFLWQ TNWQNVDPKL YIQPFLDVIL
0101: SDETGAPITG VALSSVYKIL TLDVFTLDTV NVGEAMHIIV DAVKSCRFEV TDPASEEVVL MKILQVLLAC IKSKAANGLS NQDIFTIINI CLRVVHQSTS
0201: KSELLQRLAR HTMHELVRCI FSQLPYISPL ANETDLNVVD WDQKSGESKV ENGIIDSVSL NNDEKETEVS DDLNVAANGE SAMLAPFGIP CMVEIFHFLC
0301: TLLNVGESGE VNSRSNPIAF DEDVPLFALG LVNSAIELGG SSFREHPKLL SLIQDELFCN LMQFGMSMSP LVLTTVCSIV LNLYLSFRTE LKVQLEAFFS
0401: CVLLRIAQSK HGSSYQQQEV AMEALVDFCR QHTFMAEMFA NFDCDITCSN VFEDVSNLLS KSAFPVNGPL SAMHILALDG LISMVQGMAE RVGEELPASD
0501: VPTHEEGYEA FWTVRCENYG DPNLWVPFVR KSKHIKKRLM VGADHFNNDP KKGLQQLQAL HLLPEELDPK SVACFFRYTC GLDKNLIGDF LGNHDQFCVQ
0601: VLHEFAKTFD FQNMNLDNAL RLFVGTFRLP GESQKIQRVL EAFSERYYEQ SPQILIDKDA ALLLSYSIIL LNTDHHNTQV KKKMTEEDFI RNNRCINGGA
0701: DLPREYLSEL YHSICDSEIQ MIPDQGTGFQ MMTSSRWISV IYKSKETSPY IICDSTSYLD RDMFHIVYGP TIAATSVVFE QAEQEDVLQR CVDGLLAIAK
0801: LSAYYHLNRV LDDLVVSLCK FTPFFASLSV DEAVLALGED ARARMATEAV FLIANKYGDY ISSGWKSILE CVLSLHKLQI LPAHIASDAA DDPEPSTSNT
0901: EQERPLANPV SVVSQAQPSA APRKSSSFIG RFSQLLSFDM EETEPLPTEE ELAAYKLARG IVKDCHIDSI FSDSKFLQAE SLQQLVSSLI KAAAKDEASA
1001: VFCLELLIAV TLNNRDRILL IWQTVYEHIS GIVQSTTTPC PLVEKAVFGV LKICQRLLPY KENLTDELLK SLQLVLKLDA RVADAYCEPI TQEVARLVKA
1101: NASHVRSHVG WRTIISLLSI TARHPEASDA GFEALRFIMS EGAHLLPSNY ILCLDAARQF AESRVGEIDR SISAIDLMSN SVFCLARWSQ EAKKSVGEDE
1201: AMMKLSQDIG EMWLRLVNNL KRVCLDQRDQ VRNHAILMLQ RSVAGADGIM LPQPLWFQCF DSAIFPLLDE LLAVSVENSR KTFKKTVEET LVVATKLMSK
1301: AFLQSLQDIS QQPSFCRLWL GVLERMETYM STKFRGKRSE KVHELIPELL KNTLLVMKTT GVLLPGDDIG SDSFWQLTWL HVKKISPSLQ SEVFPQEELD
1401: QFQRRNAKPE DTPPARVSNL FGTMSEVFNG YERQYCDLSA SLSKKCSSAL SLDGEQKKQK LSEIKSGLEI AEALIRKMDL EARSLPPGVK SSLLVKLREF
1501: KSDLNNFKTE VKRITSANSN AAARDQLLEA GMADTKTASA DQRARLMMST ERLGRTTDRL KDGRRTMMET EEIGVSILQD LHGQRQSLLR AGDTLSGVDE
1601: NVGKSKKILT GMTTRMNRNK WTIGAIIAAL VVAIIIILYF KLTK
0101: SDETGAPITG VALSSVYKIL TLDVFTLDTV NVGEAMHIIV DAVKSCRFEV TDPASEEVVL MKILQVLLAC IKSKAANGLS NQDIFTIINI CLRVVHQSTS
0201: KSELLQRLAR HTMHELVRCI FSQLPYISPL ANETDLNVVD WDQKSGESKV ENGIIDSVSL NNDEKETEVS DDLNVAANGE SAMLAPFGIP CMVEIFHFLC
0301: TLLNVGESGE VNSRSNPIAF DEDVPLFALG LVNSAIELGG SSFREHPKLL SLIQDELFCN LMQFGMSMSP LVLTTVCSIV LNLYLSFRTE LKVQLEAFFS
0401: CVLLRIAQSK HGSSYQQQEV AMEALVDFCR QHTFMAEMFA NFDCDITCSN VFEDVSNLLS KSAFPVNGPL SAMHILALDG LISMVQGMAE RVGEELPASD
0501: VPTHEEGYEA FWTVRCENYG DPNLWVPFVR KSKHIKKRLM VGADHFNNDP KKGLQQLQAL HLLPEELDPK SVACFFRYTC GLDKNLIGDF LGNHDQFCVQ
0601: VLHEFAKTFD FQNMNLDNAL RLFVGTFRLP GESQKIQRVL EAFSERYYEQ SPQILIDKDA ALLLSYSIIL LNTDHHNTQV KKKMTEEDFI RNNRCINGGA
0701: DLPREYLSEL YHSICDSEIQ MIPDQGTGFQ MMTSSRWISV IYKSKETSPY IICDSTSYLD RDMFHIVYGP TIAATSVVFE QAEQEDVLQR CVDGLLAIAK
0801: LSAYYHLNRV LDDLVVSLCK FTPFFASLSV DEAVLALGED ARARMATEAV FLIANKYGDY ISSGWKSILE CVLSLHKLQI LPAHIASDAA DDPEPSTSNT
0901: EQERPLANPV SVVSQAQPSA APRKSSSFIG RFSQLLSFDM EETEPLPTEE ELAAYKLARG IVKDCHIDSI FSDSKFLQAE SLQQLVSSLI KAAAKDEASA
1001: VFCLELLIAV TLNNRDRILL IWQTVYEHIS GIVQSTTTPC PLVEKAVFGV LKICQRLLPY KENLTDELLK SLQLVLKLDA RVADAYCEPI TQEVARLVKA
1101: NASHVRSHVG WRTIISLLSI TARHPEASDA GFEALRFIMS EGAHLLPSNY ILCLDAARQF AESRVGEIDR SISAIDLMSN SVFCLARWSQ EAKKSVGEDE
1201: AMMKLSQDIG EMWLRLVNNL KRVCLDQRDQ VRNHAILMLQ RSVAGADGIM LPQPLWFQCF DSAIFPLLDE LLAVSVENSR KTFKKTVEET LVVATKLMSK
1301: AFLQSLQDIS QQPSFCRLWL GVLERMETYM STKFRGKRSE KVHELIPELL KNTLLVMKTT GVLLPGDDIG SDSFWQLTWL HVKKISPSLQ SEVFPQEELD
1401: QFQRRNAKPE DTPPARVSNL FGTMSEVFNG YERQYCDLSA SLSKKCSSAL SLDGEQKKQK LSEIKSGLEI AEALIRKMDL EARSLPPGVK SSLLVKLREF
1501: KSDLNNFKTE VKRITSANSN AAARDQLLEA GMADTKTASA DQRARLMMST ERLGRTTDRL KDGRRTMMET EEIGVSILQD LHGQRQSLLR AGDTLSGVDE
1601: NVGKSKKILT GMTTRMNRNK WTIGAIIAAL VVAIIIILYF KLTK
0001: MGYQNHPSGS NSFHGEFKRC HSKPSKGAVA SMINSEIGAV LAVMRRNVRW GVRYIADDDQ LEHSLIHSLK ELRKQIFSWQ SNWQYVDPRL YIQPFLDVIL
0101: SDETGAPITG VALSSVYKIL TLEVFTLETV NVGEAMHIIV DAVKSCRFEV TDPASEEVVL MKILQVLLAC VKSKASNGLS NQDICTIVNT CLRVVHQSSS
0201: KSELLQRIAR HTMHELIRCI FSQLPFISPL ANECELHVDN KVGTVDWDPN SGEKRVENGN IASISDTLGT DKDDPSSEMV IPETDLRNDE KKTEVSDDLN
0301: AAANGENAMM APYGIPCMVE IFHFLCTLLN VGENGEVNSR SNPIAFDEDV PLFALGLINS AIELGGPSFR EHPKLLTLIQ DDLFCNLMQF GMSMSPLILS
0401: TVCSIVLNLY LNLRTELKVQ LEAFFSYVLL RIAQSKHGSS YQQQEVAMEA LVDLCRQHTF IAEVFANFDC DITCSNVFED VSNLLSKNAF PVNGPLSAMH
0501: ILALDGLISM VQGMAERVGE ELPASDVPTH EERYEEFWTV RCENYGDPNF WVPFVRKVKH IKKKLMLGAD RFNRDPNKGL QYLQGVHLLP EKLDPKSVAC
0601: FFRYTCGLDK NVMGDFLGNH DQFCIQVLHE FAKTFDFQNM NLATALRLFV GTFKLSGEAQ KIHRVLEAFS ERYYEQSPHI LIDKDAAFVL AYSIILLNTD
0701: QHNAQVKTRM TEEDFIRNNR TINGGADLPR EYLSEIYHSI RHSEIQMDED KGTGFQLMTA SRWISVIYKS KETSPYIQCD AASHLDRDMF YIVSGPTIAA
0801: TSVVFEQAEQ EDVLRRCIDG LLAIAKLSAY YHLNSVLDDL VVSLCKFTPF FAPLSADEAV LVLGEDARAR MATEAVFLIA NKYGDYISAG WKNILECVLS
0901: LNKLHILPDH IASDAADDPE LSTSNLEQEK PSANPVPVVS QSQPSAMPRK SSSFIGRFLL SFDSEETKPL PSEEELAAYK HARGIVKDCH IDSIFSDSKF
1001: LQAESLQQLV NSLIRASGKD EASSVFCLEL LIAVTLNNRD RILLIWPTVY EHILGIVQLT LTPCTLVEKA VFGVLKICQR LLPYKENLTD ELLKSLQLVL
1101: KLKAKVADAY CERIAQEVVR LVKANASHVR SRTGWRTIIS LLSITARHPE ASEAGFEALR FIMSEGAHLL PSNYELCLDA ASHFAESRVG EVDRSISAID
1201: LMSNSVFCLA RWSQEAKNSI GETDAMMKLS EDIGKMWLKL VKNLKKVCLD QRDEVRNHAI SMLQRAIAGA DGIMLPQPLW FQCFDSAVFI LLDDVLTFSI
1301: ENSRKTLKKT VEETLVLATK LMSKAFLQSL QDISQQPSFC RLWVGVLNRL ETYMSTEFRG KRSEKVNELI PELLKNTLLV MKATGVLLPG DDIGSDSFWQ
1401: LTWLHVNKIS PSLQSEVFPQ EELDQFQRRN AKPEDPPVPG NEV
0101: SDETGAPITG VALSSVYKIL TLEVFTLETV NVGEAMHIIV DAVKSCRFEV TDPASEEVVL MKILQVLLAC VKSKASNGLS NQDICTIVNT CLRVVHQSSS
0201: KSELLQRIAR HTMHELIRCI FSQLPFISPL ANECELHVDN KVGTVDWDPN SGEKRVENGN IASISDTLGT DKDDPSSEMV IPETDLRNDE KKTEVSDDLN
0301: AAANGENAMM APYGIPCMVE IFHFLCTLLN VGENGEVNSR SNPIAFDEDV PLFALGLINS AIELGGPSFR EHPKLLTLIQ DDLFCNLMQF GMSMSPLILS
0401: TVCSIVLNLY LNLRTELKVQ LEAFFSYVLL RIAQSKHGSS YQQQEVAMEA LVDLCRQHTF IAEVFANFDC DITCSNVFED VSNLLSKNAF PVNGPLSAMH
0501: ILALDGLISM VQGMAERVGE ELPASDVPTH EERYEEFWTV RCENYGDPNF WVPFVRKVKH IKKKLMLGAD RFNRDPNKGL QYLQGVHLLP EKLDPKSVAC
0601: FFRYTCGLDK NVMGDFLGNH DQFCIQVLHE FAKTFDFQNM NLATALRLFV GTFKLSGEAQ KIHRVLEAFS ERYYEQSPHI LIDKDAAFVL AYSIILLNTD
0701: QHNAQVKTRM TEEDFIRNNR TINGGADLPR EYLSEIYHSI RHSEIQMDED KGTGFQLMTA SRWISVIYKS KETSPYIQCD AASHLDRDMF YIVSGPTIAA
0801: TSVVFEQAEQ EDVLRRCIDG LLAIAKLSAY YHLNSVLDDL VVSLCKFTPF FAPLSADEAV LVLGEDARAR MATEAVFLIA NKYGDYISAG WKNILECVLS
0901: LNKLHILPDH IASDAADDPE LSTSNLEQEK PSANPVPVVS QSQPSAMPRK SSSFIGRFLL SFDSEETKPL PSEEELAAYK HARGIVKDCH IDSIFSDSKF
1001: LQAESLQQLV NSLIRASGKD EASSVFCLEL LIAVTLNNRD RILLIWPTVY EHILGIVQLT LTPCTLVEKA VFGVLKICQR LLPYKENLTD ELLKSLQLVL
1101: KLKAKVADAY CERIAQEVVR LVKANASHVR SRTGWRTIIS LLSITARHPE ASEAGFEALR FIMSEGAHLL PSNYELCLDA ASHFAESRVG EVDRSISAID
1201: LMSNSVFCLA RWSQEAKNSI GETDAMMKLS EDIGKMWLKL VKNLKKVCLD QRDEVRNHAI SMLQRAIAGA DGIMLPQPLW FQCFDSAVFI LLDDVLTFSI
1301: ENSRKTLKKT VEETLVLATK LMSKAFLQSL QDISQQPSFC RLWVGVLNRL ETYMSTEFRG KRSEKVNELI PELLKNTLLV MKATGVLLPG DDIGSDSFWQ
1401: LTWLHVNKIS PSLQSEVFPQ EELDQFQRRN AKPEDPPVPG NEV
Arabidopsis Description
GNL1ARF guanine-nucleotide exchange factor GNL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLY5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.