Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g088290.2.1 | Tomato | cytosol | 94.5 | 94.96 |
| PGSC0003DMT400072858 | Potato | cytosol | 66.48 | 65.01 |
| CDY30249 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 62.31 | 62.76 |
| Bra040986.1-P | Field mustard | cytosol | 62.67 | 61.97 |
| CDX74452 | Canola | cytosol | 62.67 | 61.97 |
| AT5G39500.1 | Thale cress | cytosol | 62.53 | 61.4 |
| CDX67432 | Canola | plastid | 62.88 | 54.2 |
| Bra028434.1-P | Field mustard | cytosol, plasma membrane, plastid | 62.46 | 52.84 |
| PGSC0003DMT400019795 | Potato | cytosol | 38.81 | 39.83 |
| PGSC0003DMT400033251 | Potato | cytosol | 22.37 | 17.83 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005086 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006890 | GO:GO:0006897 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0032012 | GO:GO:0065009 | GO:GO:0080119 |
| InterPro:IPR000904 | InterPro:IPR023394 | UniProt:M0ZM14 | PFAM:PF01369 | PFAM:PF12783 | EnsemblPlantsGene:PGSC0003DMG400001432 |
| PGSC:PGSC0003DMG400001432 | EnsemblPlants:PGSC0003DMT400003631 | PFscan:PS50190 | PANTHER:PTHR44190 | PANTHER:PTHR44190:SF1 | SMART:SM00222 |
| SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf |
| UniParc:UPI0002954A9A | SEG:seg | : | : | : | : |
Description
GNOM-like 1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001432]
Coordinates
chr2:+:45957204..45964096
Molecular Weight (calculated)
159641.0 Da
IEP (calculated)
5.922
GRAVY (calculated)
-0.018
Length
1417 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGCPNQQSGV NTPISEPKVH TIKPSRGALE CMVNSEIGAV LAVMRRNVRW GFRYAAEDDQ LEYSLIQSFK ELRKKIFSWR HEWNNVDPLL YLKPFLDVIQ
0101: SDETGAPITG VALSSVYKFL TLAIIESADM NVDKALHQIV DAVTSCRFEV TDPASEEVVL MKILQVLLAC MKSKASKNLT NHHVCNIVNT CFRLVHQASA
0201: KSELLQRIAR HTMHELVRCI FVHLPDIESR VCADPETGKK QEDNGCVNVS VGDDPTDEKT RKRDIACNGE NPMMDPHGVP CMVEIFHFLC SLLNVMESIE
0301: IGSRSNPIAY EEDVPLFALG LINSAIELGG ASFGNHPKLL ALIQEELFHN LMCFGLSMSP LILSTVCSIV LNLYHHLRFK LKLQLEAFFS GVLLKIAQSK
0401: HGASYQLQEV AMETLVDFCR QHMFVAEMYA NYDCDISCSN IFEELANLLS KSTFPVNSPL SALNTLALEG LIAIIQGMAE RIGQDSLVSD EGSFNLDEYR
0501: PFWVEICKDY SDPIHWVPFV HKMKQIKKKL LVGVDHFNRD PKKGMEYLQA VHLLPDKLDP KSVACFFRFS NGLDKNLVGD FLGSHEEFYI QVLHEFSRSF
0601: DFQDMNLDTA LRIFLETFRL PGESQKIHRV LEAFSEQYYE QSPDVLVNKD AALVLSYSLI MLNTDQHNTQ VKKKMTEEDF IRNNRRINGG NDLPREFLSE
0701: LYHSICENEI RISSDRGADT PLLAPSHWIG LVHKSRQTSP FIVCDHGPYL DYDMFAMLSG QTIASISVVL DHVEQEDVWQ TCIDGFLAIA KISASYCFDD
0801: VLDDLVVSLC KFTTLLCPSY TDEFIVTFAQ DNKARLSTLA VFTIANKYGD HIRSGWKNIL DCILSLHNFG LLPTRHFSDD VESTSDADKS KPAAASPSAP
0901: HVPSLAPSRK SSGLMGRFSQ LLYLDAEEPA PQPNEKQLAA RQQTLQTIQN CHIDTIFAES KFLQAESLSQ LVRALVMAAG RPQKGNISLE DEETAVFCLE
1001: LLIAITINNR DRIMLLWQVV YEHIASVVQS TTMPCTLVEK AVFGLLRICQ RLLPYKENLT DELLKSLQLI LKLDARVADA FLEQITQEVM HLVKANAMQI
1101: RSNMGWRTII SLLSITARHP EASEAGFETL SFIMADGAHL LPANYILCLN AASHFADSRV GSVDQAVRSL DLMAGSLVCL VRWSHKTKDA LGEEAAIKMS
1201: QDITEMWLRL VQGLRKFCLD WREEVRGHAI LMLQRCLTVI EGIHISTDLW LQCFDQMIFT MLDELLELAP QGSLKDYRSI EGAIFLSLKL MFKVFLQSLQ
1301: HLSQLPSFCK LWLGLLDHTE RCMKMKFKGR RSEKIPELVP ELLKNTLLIM KTSGILIPSD PVGGDSFWQL TWLHVHKICP SLQSEVFPSS ELEQLQKQHI
1401: QAGCSPLSEG TVLVSPS
0101: SDETGAPITG VALSSVYKFL TLAIIESADM NVDKALHQIV DAVTSCRFEV TDPASEEVVL MKILQVLLAC MKSKASKNLT NHHVCNIVNT CFRLVHQASA
0201: KSELLQRIAR HTMHELVRCI FVHLPDIESR VCADPETGKK QEDNGCVNVS VGDDPTDEKT RKRDIACNGE NPMMDPHGVP CMVEIFHFLC SLLNVMESIE
0301: IGSRSNPIAY EEDVPLFALG LINSAIELGG ASFGNHPKLL ALIQEELFHN LMCFGLSMSP LILSTVCSIV LNLYHHLRFK LKLQLEAFFS GVLLKIAQSK
0401: HGASYQLQEV AMETLVDFCR QHMFVAEMYA NYDCDISCSN IFEELANLLS KSTFPVNSPL SALNTLALEG LIAIIQGMAE RIGQDSLVSD EGSFNLDEYR
0501: PFWVEICKDY SDPIHWVPFV HKMKQIKKKL LVGVDHFNRD PKKGMEYLQA VHLLPDKLDP KSVACFFRFS NGLDKNLVGD FLGSHEEFYI QVLHEFSRSF
0601: DFQDMNLDTA LRIFLETFRL PGESQKIHRV LEAFSEQYYE QSPDVLVNKD AALVLSYSLI MLNTDQHNTQ VKKKMTEEDF IRNNRRINGG NDLPREFLSE
0701: LYHSICENEI RISSDRGADT PLLAPSHWIG LVHKSRQTSP FIVCDHGPYL DYDMFAMLSG QTIASISVVL DHVEQEDVWQ TCIDGFLAIA KISASYCFDD
0801: VLDDLVVSLC KFTTLLCPSY TDEFIVTFAQ DNKARLSTLA VFTIANKYGD HIRSGWKNIL DCILSLHNFG LLPTRHFSDD VESTSDADKS KPAAASPSAP
0901: HVPSLAPSRK SSGLMGRFSQ LLYLDAEEPA PQPNEKQLAA RQQTLQTIQN CHIDTIFAES KFLQAESLSQ LVRALVMAAG RPQKGNISLE DEETAVFCLE
1001: LLIAITINNR DRIMLLWQVV YEHIASVVQS TTMPCTLVEK AVFGLLRICQ RLLPYKENLT DELLKSLQLI LKLDARVADA FLEQITQEVM HLVKANAMQI
1101: RSNMGWRTII SLLSITARHP EASEAGFETL SFIMADGAHL LPANYILCLN AASHFADSRV GSVDQAVRSL DLMAGSLVCL VRWSHKTKDA LGEEAAIKMS
1201: QDITEMWLRL VQGLRKFCLD WREEVRGHAI LMLQRCLTVI EGIHISTDLW LQCFDQMIFT MLDELLELAP QGSLKDYRSI EGAIFLSLKL MFKVFLQSLQ
1301: HLSQLPSFCK LWLGLLDHTE RCMKMKFKGR RSEKIPELVP ELLKNTLLIM KTSGILIPSD PVGGDSFWQL TWLHVHKICP SLQSEVFPSS ELEQLQKQHI
1401: QAGCSPLSEG TVLVSPS
0001: MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
0101: IRSDETGAPI TSIALSSVYK ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM LSNQHVCTVV NTCFRVVHQA
0201: GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA
0301: SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM
0401: VCSIVLNLYQ HLRTELKLQL EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL SNLLSKSTFP VNCPLSAMHI
0501: LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC
0601: FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD
0701: QHNVQVKKKM TEEDFIRNNR HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD SRAYLDHDMF AIMSGPTIAA
0801: ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR
0901: LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF
1001: LQAESLLQLA RALIWAAGRP QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI FGLLRICQRL LPYKESLADE
1101: LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ
1201: SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL
1301: DDLLEIAAGS QKDYRNMEGT LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL KNILLVMKTK GVLLQRSALG
1401: GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN GLSSPENTTG S
Arabidopsis Description
GNARF guanine-nucleotide exchange factor GNOM [Source:UniProtKB/Swiss-Prot;Acc:Q42510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.