Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032659.1-P | Field mustard | cytosol, plastid | 99.26 | 99.32 |
| AT1G01960.1 | Thale cress | cytosol | 93.95 | 94.11 |
| KRH00582 | Soybean | extracellular, golgi | 11.18 | 82.01 |
| KRH00580 | Soybean | cytosol | 75.24 | 73.98 |
| VIT_15s0048g00800.t01 | Wine grape | cytosol | 74.84 | 73.75 |
| KRH65253 | Soybean | cytosol | 74.73 | 73.51 |
| KRH76287 | Soybean | cytosol | 75.36 | 73.06 |
| KRH40586 | Soybean | cytosol | 74.27 | 72.98 |
| Solyc01g091460.2.1 | Tomato | extracellular | 73.53 | 72.5 |
| PGSC0003DMT400033251 | Potato | cytosol | 73.3 | 72.27 |
| CDX89082 | Canola | cytosol | 72.11 | 71.45 |
| CDY51011 | Canola | cytosol | 71.76 | 71.11 |
| GSMUA_Achr5P18830_001 | Banana | cytosol | 67.94 | 69.57 |
| GSMUA_Achr8P19420_001 | Banana | cytosol | 67.71 | 68.14 |
| Os03t0246800-02 | Rice | plasma membrane | 26.98 | 66.43 |
| KRH00583 | Soybean | endoplasmic reticulum, vacuole | 5.53 | 65.99 |
| EER92558 | Sorghum | cytosol | 67.08 | 65.55 |
| Zm00001d028438_P002 | Maize | plastid | 67.03 | 65.46 |
| TraesCS4D01G225300.1 | Wheat | golgi, unclear | 66.74 | 65.44 |
| HORVU4Hr1G063180.1 | Barley | plastid | 66.63 | 65.32 |
| TraesCS4A01G067400.1 | Wheat | plastid | 66.57 | 65.27 |
| TraesCS4B01G224700.1 | Wheat | plastid | 65.72 | 64.43 |
| CDY59102 | Canola | cytosol, mitochondrion, plastid | 46.95 | 48.58 |
| CDY54791 | Canola | mitochondrion, nucleus, plastid | 46.95 | 48.58 |
| CDX75498 | Canola | mitochondrion, plasma membrane, plastid | 45.69 | 47.45 |
| CDX69135 | Canola | plastid | 45.64 | 47.39 |
| CDY44841 | Canola | cytosol | 33.83 | 34.28 |
| CDY30954 | Canola | extracellular, golgi | 14.38 | 30.25 |
| CDY30953 | Canola | cytosol | 2.8 | 25.0 |
| CDY36422 | Canola | cytosol | 18.43 | 22.29 |
| CDX98140 | Canola | cytosol | 18.37 | 22.24 |
| CDX74452 | Canola | cytosol | 17.63 | 21.56 |
| CDY30249 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 17.28 | 21.54 |
| CDX92516 | Canola | cytosol | 16.26 | 20.76 |
| CDY58967 | Canola | cytosol | 16.09 | 20.54 |
| CDX67432 | Canola | plastid | 17.57 | 18.73 |
| CDY69502 | Canola | cytosol | 1.83 | 12.08 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.2 | GO:A0A078HL68 | UniProt:A0A078HL68 | InterPro:ARM-type_fold |
| EnsemblPlants:CDY38039 | ProteinID:CDY38039 | ProteinID:CDY38039.1 | ncoils:Coil | InterPro:DCB_dom | GO:GO:0003674 |
| GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009561 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0032012 | GO:GO:0032588 | GO:GO:0065009 | EnsemblPlantsGene:GSBRNA2T00065103001 | InterPro:IPR000904 |
| InterPro:IPR023394 | InterPro:Mon2_C | PFAM:PF01369 | PFAM:PF09324 | PFAM:PF12783 | PFAM:PF16206 |
| PFAM:PF16213 | PFscan:PS50190 | PANTHER:PTHR10663 | PANTHER:PTHR10663:SF108 | SMART:SM00222 | SUPFAM:SSF48371 |
| SUPFAM:SSF48425 | InterPro:Sec7_C | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf |
| UniParc:UPI0004EDC5BF | SEG:seg | : | : | : | : |
Description
BnaCnng09000DBrefeldin A-inhibited guanine nucleotide-exchange protein 3 [Source:Projected from Arabidopsis thaliana (AT1G01960) UniProtKB/Swiss-Prot;Acc:Q9LPC5]
Coordinates
chrLK032414:-:214201..220802
Molecular Weight (calculated)
194769.0 Da
IEP (calculated)
5.416
GRAVY (calculated)
-0.126
Length
1753 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASTEADSRL ARVVIPSLDK IIKNASWRKH SKLAHECKSL ILRLRSPDDS SPLADADSDS GSSLPGPLHD GASAEYSLAE SELILSPLIN ASSTGVLKIV
0101: DPALDCIQKL IAHGYLRGEA DPTGAPEALL LSKLIETVCK CHELDDEALE LLLLKTLLTA VTSISLRIHG DSLLQIVRTC YGIYLGSRNA VNQATAKASL
0201: VQMSVIVFRR MEADSSTVPI QPIVVAELME PTGRSSESDP STTQSVQGFI TKIMQDIDGV FNSSANSKGT FGGHDGAFET SLPGTANPTD LLDSTDKDML
0301: DAKYWEISMY KSALEGRKGE LADGEVEKDD DSEVQIGNKL RRDAFLVFRA LCKLSMKTPP KEDPELMRGK IVALELLKIL LENAGAVFRT SDRFLGAIKQ
0401: YLCLSLLKNS ASNLMIIFQL SCSILLSLVS RFRAGLKAEI GVFFPMIVLR VLENVAQPDF QQKMIVLRFL EKLCVDSQIL VDIFINYDCD VNSSNIFERM
0501: VNGLLKTAQG VPPGMVTTLL PPQEAAMKLE ALKCLVAVLR SMGDWVNKQL RLPDPYSAKM LEIDDRNLEE GGHPVENGKG DGGHGGFERS ESQSELSSGT
0601: SDALAIEQRR AYKLELQEGI SIFNQKPKKG IEFLIKANKV GDSPEEIAAF LKDALGLNKT LVGDYLGERE DLSLKVMHAY VDSFDFQGME FDEAIRAFLR
0701: GFRLPGEAQK IDRIMEKFAE RYCKCNPKAF SSADTAYVLA YSVILLNTDA HNPMVKSKMT ADGFIRNNRG IDDGKDLPEE YLRALYERIS RNEIKMKDDG
0801: LGPQQKQPAN SSRLLGLDSI LNIVVPRRGD DLYMETSDDL IRHMQERFKE KARKSESVYY AASDVVILRF MVEVCWAPML AAFSVPLDQS DDAVITTLCL
0901: EGFHHAIHVT SVMSLKTHRD AFVTSLAKFT SLHSPADIKQ KNIEAIKAIV KLAEEEGNYL QDAWEHILTC VSRFEHLHLL GEGAPPDATF FAFPQTESGN
1001: SPMAKSNSVP AVKERTPGKL QYAASAVIRG SYDGSGVAGK ASNTVTSEQM NNLISNLNLL EQVGDMSRIF TRSQRLNSEA IIDFVKALCK VSMDELRSPS
1101: DPRVFSLTKI VEIAHYNMNR IRLVWSSIWH VLSDFFVAIG CSDNLSIAIF AMDSLRQLSM KFLEREELAN YNFQNEFMKP FVVVMRKSGA VEIRELIIRC
1201: VSQMVLSRVN SVKSGWKSMF MIFTTAAHDA HKNIVFLSFE MVEKIIRDYF PHITETETTT FTDCVNCLVA FTNSKFEKDI SLQAISFLQY CARKLAEGSV
1301: GSSLRRNPPS SPQGGKGGNH DSGKFLESDE DLYSWFPLLA GLSELSFDPR AEIRKVALKV LFDTLRNHGD HFSLSLWERV FESVLFRIFD YVRHDDVDPP
1401: GEHSADNGEV DQESWLYETC SLALQLVVDL FVNFYKTVNP LLKKVLMLFV SLIKRPHQSL AGAGIASLVR LMRDVGHQFS DEQWDEVVSC IKEAADATSP
1501: DFSFVTSEDL TQDVVSNEDE TSENTNDALR RRNRQLHAAV ADAKSKASIQ IFVIQAVTDI YIMYRTSLAA KHMLMLYDAM HGVASNAHKI NADTVLRAKL
1601: QELGSSPESQ EAPLLRLENE SFQTCMTFLD NLITDQPLGY EEAEIESHLI RLCREVLEFY VEISCSKEQS SRWAVPSGSG KRKELTARAP LVVAAIQTLG
1701: NMGESLFKKN LPELFPLIAT LISCEHGSGG EVQVALSDML QRSMGPLLLH SCS
0101: DPALDCIQKL IAHGYLRGEA DPTGAPEALL LSKLIETVCK CHELDDEALE LLLLKTLLTA VTSISLRIHG DSLLQIVRTC YGIYLGSRNA VNQATAKASL
0201: VQMSVIVFRR MEADSSTVPI QPIVVAELME PTGRSSESDP STTQSVQGFI TKIMQDIDGV FNSSANSKGT FGGHDGAFET SLPGTANPTD LLDSTDKDML
0301: DAKYWEISMY KSALEGRKGE LADGEVEKDD DSEVQIGNKL RRDAFLVFRA LCKLSMKTPP KEDPELMRGK IVALELLKIL LENAGAVFRT SDRFLGAIKQ
0401: YLCLSLLKNS ASNLMIIFQL SCSILLSLVS RFRAGLKAEI GVFFPMIVLR VLENVAQPDF QQKMIVLRFL EKLCVDSQIL VDIFINYDCD VNSSNIFERM
0501: VNGLLKTAQG VPPGMVTTLL PPQEAAMKLE ALKCLVAVLR SMGDWVNKQL RLPDPYSAKM LEIDDRNLEE GGHPVENGKG DGGHGGFERS ESQSELSSGT
0601: SDALAIEQRR AYKLELQEGI SIFNQKPKKG IEFLIKANKV GDSPEEIAAF LKDALGLNKT LVGDYLGERE DLSLKVMHAY VDSFDFQGME FDEAIRAFLR
0701: GFRLPGEAQK IDRIMEKFAE RYCKCNPKAF SSADTAYVLA YSVILLNTDA HNPMVKSKMT ADGFIRNNRG IDDGKDLPEE YLRALYERIS RNEIKMKDDG
0801: LGPQQKQPAN SSRLLGLDSI LNIVVPRRGD DLYMETSDDL IRHMQERFKE KARKSESVYY AASDVVILRF MVEVCWAPML AAFSVPLDQS DDAVITTLCL
0901: EGFHHAIHVT SVMSLKTHRD AFVTSLAKFT SLHSPADIKQ KNIEAIKAIV KLAEEEGNYL QDAWEHILTC VSRFEHLHLL GEGAPPDATF FAFPQTESGN
1001: SPMAKSNSVP AVKERTPGKL QYAASAVIRG SYDGSGVAGK ASNTVTSEQM NNLISNLNLL EQVGDMSRIF TRSQRLNSEA IIDFVKALCK VSMDELRSPS
1101: DPRVFSLTKI VEIAHYNMNR IRLVWSSIWH VLSDFFVAIG CSDNLSIAIF AMDSLRQLSM KFLEREELAN YNFQNEFMKP FVVVMRKSGA VEIRELIIRC
1201: VSQMVLSRVN SVKSGWKSMF MIFTTAAHDA HKNIVFLSFE MVEKIIRDYF PHITETETTT FTDCVNCLVA FTNSKFEKDI SLQAISFLQY CARKLAEGSV
1301: GSSLRRNPPS SPQGGKGGNH DSGKFLESDE DLYSWFPLLA GLSELSFDPR AEIRKVALKV LFDTLRNHGD HFSLSLWERV FESVLFRIFD YVRHDDVDPP
1401: GEHSADNGEV DQESWLYETC SLALQLVVDL FVNFYKTVNP LLKKVLMLFV SLIKRPHQSL AGAGIASLVR LMRDVGHQFS DEQWDEVVSC IKEAADATSP
1501: DFSFVTSEDL TQDVVSNEDE TSENTNDALR RRNRQLHAAV ADAKSKASIQ IFVIQAVTDI YIMYRTSLAA KHMLMLYDAM HGVASNAHKI NADTVLRAKL
1601: QELGSSPESQ EAPLLRLENE SFQTCMTFLD NLITDQPLGY EEAEIESHLI RLCREVLEFY VEISCSKEQS SRWAVPSGSG KRKELTARAP LVVAAIQTLG
1701: NMGESLFKKN LPELFPLIAT LISCEHGSGG EVQVALSDML QRSMGPLLLH SCS
0001: MASTEVDSRL GRVVIPALDK VIKNASWRKH SKLAHECKSV IERLRSPENS SPVADSESGS SIPGPLHDGG AAEYSLAESE IILSPLINAS STGVLKIVDP
0101: AVDCIQKLIA HGYVRGEADP TGGPEALLLS KLIETICKCH ELDDEGLELL VLKTLLTAVT SISLRIHGDS LLQIVRTCYG IYLGSRNVVN QATAKASLVQ
0201: MSVIVFRRME ADSSTVPIQP IVVAELMEPM DKSESDPSTT QSVQGFITKI MQDIDGVFNS ANAKGTFGGH DGAFETSLPG TANPTDLLDS TDKDMLDAKY
0301: WEISMYKSAL EGRKGELADG EVEKDDDSEV QIGNKLRRDA FLVFRALCKL SMKTPPKEDP ELMRGKIVAL ELLKILLENA GAVFRTSDRF LGAIKQYLCL
0401: SLLKNSASNL MIIFQLSCSI LLSLVSRFRA GLKAEIGVFF PMIVLRVLEN VAQPDFQQKM IVLRFLDKLC VDSQILVDIF INYDCDVNSS NIFERMVNGL
0501: LKTAQGVPPG TVTTLLPPQE AAMKLEAMKC LVAVLRSMGD WVNKQLRLPD PYSAKMLEIV DRNLEEGSHP VENGKGDGGH GGFERSDSQS ELSSGNSDAL
0601: AIEQRRAYKL ELQEGISIFN QKPKKGIEFL IKANKVGDSP EEIAAFLKDA SGLNKTLIGD YLGEREDLSL KVMHAYVDSF EFQGMEFDEA IRAFLRGFRL
0701: PGEAQKIDRI MEKFAERFCK CNPKDFSSAD TAYVLAYSVI LLNTDAHNPM VKSKMTADGF IRNNRGIDDG KDLPEEYLRA LYERISRNEI KMKDDGLGPQ
0801: QKQPTNSSRL LGLDTILNIV VPRRGDDMNM ETSDDLIRHM QERFKEKARK SESVYYAASD VIILRFMVEV CWAPMLAAFS VPLDQSDDAV ITTLCLEGFH
0901: HAIHVTSVMS LKTHRDAFVT SLAKFTSLHS PADIKQKNIE AIKAIVKLAE EEGNYLQDAW EHILTCVSRF EHLHLLGEGA PPDATFFAFP QTESGNSPLA
1001: KPNSVPAIKE RAPGKLQYAA SAMIRGSYDG SGVAGKASNT VTSEQMNNLI SNLNLLEQVG DMSRIFTRSQ RLNSEAIIDF VKALCKVSMD ELRSPSDPRV
1101: FSLTKIVEIA HYNMNRIRLV WSSIWHVLSD FFVTIGCSDN LSIAIFAMDS LRQLSMKFLE REELANYNFQ NEFMKPFVVV MRKSGAVEIR ELIIRCVSQM
1201: VLSRVDNVKS GWKSMFMIFT TAAHDAHKNI VFLSFEMVEK IIRDYFPHIT ETETTTFTDC VNCLVAFTNC KFEKDISLQA IAFLQYCARK LAEGYVGSSL
1301: RRNPPLSPQG GKIGKQDSGK FLESDEHLYS WFPLLAGLSE LSFDPRAEIR KVALKVLFDT LRNHGDHFSL ALWERVFESV LFRIFDYVRQ DVDPSEDDST
1401: DQRGYNGEVD QESWLYETCS LALQLVVDLF VNFYKTVNPL LKKVLMLFVS LIKRPHQSLA GAGIAALVRL MRDVGHQFSN EQWLEVVSCI KEAADATSPD
1501: FSYVTSEDLM EDVSNEDETN DNSNDALRRR NRQLHAVVTD AKSKASIQIF VIQAVTDIYD MYRMSLTANH MLMLFDAMHG IGSNAHKINA DLLLRSKLQE
1601: LGSSLESQEA PLLRLENESF QTCMTFLDNL ISDQPVGYNE AEIESHLISL CREVLEFYIN ISCSKEQSSR WAVPSGSGKK KELTARAPLV VAAIQTLGNM
1701: GESLFKKNLP ELFPLIATLI SCEHGSGEVQ VALSDMLQTS MGPVLLRSCC
0101: AVDCIQKLIA HGYVRGEADP TGGPEALLLS KLIETICKCH ELDDEGLELL VLKTLLTAVT SISLRIHGDS LLQIVRTCYG IYLGSRNVVN QATAKASLVQ
0201: MSVIVFRRME ADSSTVPIQP IVVAELMEPM DKSESDPSTT QSVQGFITKI MQDIDGVFNS ANAKGTFGGH DGAFETSLPG TANPTDLLDS TDKDMLDAKY
0301: WEISMYKSAL EGRKGELADG EVEKDDDSEV QIGNKLRRDA FLVFRALCKL SMKTPPKEDP ELMRGKIVAL ELLKILLENA GAVFRTSDRF LGAIKQYLCL
0401: SLLKNSASNL MIIFQLSCSI LLSLVSRFRA GLKAEIGVFF PMIVLRVLEN VAQPDFQQKM IVLRFLDKLC VDSQILVDIF INYDCDVNSS NIFERMVNGL
0501: LKTAQGVPPG TVTTLLPPQE AAMKLEAMKC LVAVLRSMGD WVNKQLRLPD PYSAKMLEIV DRNLEEGSHP VENGKGDGGH GGFERSDSQS ELSSGNSDAL
0601: AIEQRRAYKL ELQEGISIFN QKPKKGIEFL IKANKVGDSP EEIAAFLKDA SGLNKTLIGD YLGEREDLSL KVMHAYVDSF EFQGMEFDEA IRAFLRGFRL
0701: PGEAQKIDRI MEKFAERFCK CNPKDFSSAD TAYVLAYSVI LLNTDAHNPM VKSKMTADGF IRNNRGIDDG KDLPEEYLRA LYERISRNEI KMKDDGLGPQ
0801: QKQPTNSSRL LGLDTILNIV VPRRGDDMNM ETSDDLIRHM QERFKEKARK SESVYYAASD VIILRFMVEV CWAPMLAAFS VPLDQSDDAV ITTLCLEGFH
0901: HAIHVTSVMS LKTHRDAFVT SLAKFTSLHS PADIKQKNIE AIKAIVKLAE EEGNYLQDAW EHILTCVSRF EHLHLLGEGA PPDATFFAFP QTESGNSPLA
1001: KPNSVPAIKE RAPGKLQYAA SAMIRGSYDG SGVAGKASNT VTSEQMNNLI SNLNLLEQVG DMSRIFTRSQ RLNSEAIIDF VKALCKVSMD ELRSPSDPRV
1101: FSLTKIVEIA HYNMNRIRLV WSSIWHVLSD FFVTIGCSDN LSIAIFAMDS LRQLSMKFLE REELANYNFQ NEFMKPFVVV MRKSGAVEIR ELIIRCVSQM
1201: VLSRVDNVKS GWKSMFMIFT TAAHDAHKNI VFLSFEMVEK IIRDYFPHIT ETETTTFTDC VNCLVAFTNC KFEKDISLQA IAFLQYCARK LAEGYVGSSL
1301: RRNPPLSPQG GKIGKQDSGK FLESDEHLYS WFPLLAGLSE LSFDPRAEIR KVALKVLFDT LRNHGDHFSL ALWERVFESV LFRIFDYVRQ DVDPSEDDST
1401: DQRGYNGEVD QESWLYETCS LALQLVVDLF VNFYKTVNPL LKKVLMLFVS LIKRPHQSLA GAGIAALVRL MRDVGHQFSN EQWLEVVSCI KEAADATSPD
1501: FSYVTSEDLM EDVSNEDETN DNSNDALRRR NRQLHAVVTD AKSKASIQIF VIQAVTDIYD MYRMSLTANH MLMLFDAMHG IGSNAHKINA DLLLRSKLQE
1601: LGSSLESQEA PLLRLENESF QTCMTFLDNL ISDQPVGYNE AEIESHLISL CREVLEFYIN ISCSKEQSSR WAVPSGSGKK KELTARAPLV VAAIQTLGNM
1701: GESLFKKNLP ELFPLIATLI SCEHGSGEVQ VALSDMLQTS MGPVLLRSCC
Arabidopsis Description
BIG3Brefeldin A-inhibited guanine nucleotide-exchange protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.