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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, unclear

Predictor Summary:
  • cytosol 1
  • plastid 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, unclear
Any Predictor:cytosol, nucleus, plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:plastid
golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G067400.1 Wheat plastid 99.33 99.33
HORVU4Hr1G063180.1 Barley plastid 99.05 99.05
TraesCS4B01G224700.1 Wheat plastid 97.37 97.37
EER92558 Sorghum cytosol 91.44 91.14
Zm00001d028438_P002 Maize plastid 91.16 90.81
Os03t0246800-02 Rice plasma membrane 36.13 90.73
KRH00582 Soybean extracellular, golgi 10.4 77.82
GSMUA_Achr5P18830_001 Banana cytosol 74.44 77.75
GSMUA_Achr8P19420_001 Banana cytosol 74.61 76.58
VIT_15s0048g00800.t01 Wine grape cytosol 73.55 73.92
Solyc01g091460.2.1 Tomato extracellular 71.25 71.65
PGSC0003DMT400033251 Potato cytosol 71.2 71.6
KRH00580 Soybean cytosol 71.2 71.4
KRH40586 Soybean cytosol 71.14 71.3
KRH65253 Soybean cytosol 70.47 70.71
KRH76287 Soybean cytosol 70.92 70.13
CDX89082 Canola cytosol 68.46 69.19
Bra014466.1-P Field mustard cytosol 68.34 69.08
CDY51011 Canola cytosol 68.18 68.91
AT3G60860.1 Thale cress cytosol 68.46 68.27
AT1G01960.1 Thale cress cytosol 65.38 66.8
Bra032659.1-P Field mustard cytosol, plastid 65.44 66.78
CDY38039 Canola cytosol 65.44 66.74
KRH00583 Soybean endoplasmic reticulum, vacuole 5.15 62.59
TraesCS6D01G157000.1 Wheat plastid 46.53 49.46
TraesCS7D01G392600.1 Wheat cytosol, plasma membrane, plastid 45.47 48.13
TraesCS2D01G212800.2 Wheat golgi 33.05 34.46
TraesCS4D01G016900.1 Wheat cytosol 17.51 22.14
TraesCS5D01G370200.1 Wheat cytosol 16.72 21.81
TraesCS3D01G246200.1 Wheat cytosol 16.5 21.24
Protein Annotations
Gene3D:1.10.1000.11Gene3D:1.10.220.20MapMan:22.3.3.2InterPro:ARM-type_foldInterPro:DCB_domGO:GO:0003674
GO:GO:0005086GO:GO:0005488GO:GO:0005515GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987GO:GO:0032012InterPro:IPR000904InterPro:IPR023394InterPro:Mon2_CPFAM:PF01369
PFAM:PF09324PFAM:PF12783PFAM:PF16206PFAM:PF16213PFscan:PS50190PANTHER:PTHR10663
PANTHER:PTHR10663:SF108SMART:SM00222SUPFAM:SSF48371SUPFAM:SSF48425InterPro:Sec7_CInterPro:Sec7_C_sf
InterPro:Sec7_NInterPro:Sec7_domInterPro:Sec7_dom_sfEnsemblPlantsGene:TraesCS4D01G225300EnsemblPlants:TraesCS4D01G225300.1TIGR:cd00171
SEG:seg:::::
Description
No Description!
Coordinates
chr4D:+:383773323..383782126
Molecular Weight (calculated)
197693.0 Da
IEP (calculated)
5.332
GRAVY (calculated)
-0.067
Length
1788 amino acids
Sequence
(BLAST)
0001: MASAAAAAAP PLSSPESDPR LVEAFVPFLE KLVKNASWRN KAHSKLSHTA KSILDRLQRP PPPSPTAAQT PSTPTSPSTP TSSSWQPGPL RNLSLEDSEL
0101: LLSPISSALG SGSAKLVEAA LELLHRLIAH SYIHGEADPS ADPSSQLVAS LLEAACNALH LDDEHIELLL LKTLLSAVTS TSVCLHGDCL LRAVRACYDM
0201: YLGSRSTVNQ ATAKASLVQM LVIVFRRMEA DSSTIPVQPI VVAEVIELPD AGSGASPTAD ATFVQGFISK IIVDIDGAFT PLARTTSSAA AGTVPHDGAF
0301: ETTAATEEGA NPADLLDSTD KDMLDAKYWE ISMYKTALEG RKDELGVEGA VVATLDDDAD VRIGNKLRRD AFLVFRALCK LSMKTPPKDA PADPIVMRGK
0401: ILALELLKIL LENAGAVFRT SERFLGAIKQ YLCLSLLKNC ASSHMIVFQL SCSIFISLVS RFRPGLKAEI GVFFPMIILR VLENIAQPNF QAKMIVLRFL
0501: EKLCTDSQIL VDIFINYDCD VHSSNIFERM VNGLLKTAQG PPAGIATTLV PPQDTTMKSE AMKCLVSILR SMGDWMNKQL RIPDPDSPKI ESEQNDNDGG
0601: NEFPQTEING DASSEVSDSH SEVSNGVSEA ASLEQRRAYK MELQEGIALF NRKPRKGIEF LINANKVGES SEDIAAFLKS TSGLNKTMIG DYLGEREDLS
0701: LKVMHAYVDS FNFQNMEFDE AIRAFLQGFR LPGEAQKIDR VMEKFAERYC KCNPKAFSSA DTAYVLAYSV IMLNTDAHNP MVKNKMSPED FIRNNRGIDD
0801: GKDLPEEFMR SLYGRIWKKE IKMKEDEFVP HQQQSTSSNK ILGLDNILNI VIRKRGSAME TSDDLIKHMQ EQFKEKARMS ESVFYPATDV VILKFMVEVC
0901: WAPMLAAFSV PLDQSDDEIV ISQCLEGFRC AIHVTAAMSM KTQRDAFITS LAKFTSLHSA ADIKQKNIEA IKAILLIADE DGNYLQEAWE HILTCVSRFE
1001: NLHLVGEGAP PDATFFALQQ PDLDKSKQAK SSIIPGLKKK APNAGAASKR GTYDSAGVGG KASGVDQMNN AVTILLEQVG IAEMNRVFIR SQNLNSEGII
1101: DFVKALCKVS MEELRSASDP RVFSLTKIVE ITHYNMNRIR LVWSSIWHVL SEFFVTIGCS ENLSIAIFAM DSLRQLAMKF LEREELANYN FQNEFMKPFV
1201: VVMRKSRAVE IRELIIRCVS QMVLARVNHV KSGWKSMFMV FATASYDDHK NIVLLAFEII EKILRDYFPY ITETESSTFT DCVNCLIAFT NSRFNKDISL
1301: NAIGFLRFCA AKLAEGDIGS SSRLKEPSPR LTKDGKQEGA IQVDKDDHIH FWFPLLAGLS ELTFDLRPEI RKSSLQVLFD TLRNHGHVFS LPLWEKVFDS
1401: VLFPIFDYVR HAIDPSGGSS QGQSAENDPA ELDQDAWMYE TCTLALQLVV DLFVKFYDTV HPLLKKVLSL LTSFIKRPHQ SLAGIGIAAF VRLMSSAGSV
1501: FVDEKWLEVV LSLKEATTET LPDFSYIASG AYLENVPIEN GDSSDKREDE SQPSEDGTEE TSRSRNLYFA IADAKCRAAV QLLLIQAVME IYNMYRAQLS
1601: AQNTVILFEA LHTVATHAHK INSDNDLRTK LQELGSMTQM QDPPLLRLEN ESYQLCLTIL QNIFLDRAPD EGSLEVETHL VGLCKEVLEV YLSTARPAHL
1701: SGGIQPLGHW LIPVGSSKRR ELAARAPLVV STLQAISGLG DSSFEKNLGQ FFPLLAGLIS CEHGSGEVQV ALSDMFSTWV GPIVLQSC
Best Arabidopsis Sequence Match ( AT3G60860.1 )
(BLAST)
0001: MASSEADSRL SRVVTPALEK IVKNASWRKH SKLANECKAV IERLNSLQKS PPPSSSAATD SESESSVPGP LNDGGSIEYS LADSELIFSP LINACGTGLA
0101: KIIEPAIDCI QKLIAHGYIR GESDPSGGAE SLLLFKLIDS VCKCHDLGDE SIELPVLKTL LSAINSISLR IHGKCLLLVV RTCYDIYLGS KNVVNQTTAK
0201: ASLIQILVIV FRRMEADSST VPIQPIVVAE LMEPLEKSDA DGTMTQFVQG FITKIMQDID GVLNPTMSGS GSGSGSGGQD GAYGTTTVET TNPTDLLDST
0301: DKDMLDAKYW EISMYKSALE GRKGELTDGD AERDDDLEVQ IENKLRRDAC LVFRALCKLS MKAPPKESSA DPQSMRGKIL ALELLKILLE NAGAVFRTSE
0401: KFSADIKQFL CLSLLKNSAS TLMIIFQLSC SIFISLVARF RAGLKAEIGV FFPMIVLRVV ENVAQPNFQQ KMIVLRFLDK LCLDSQILVD IFLNYDCDVN
0501: SSNIFERMVN GLLKTAQGVP PGTATTLMPP QEAAMKLEAM KCLVAILKSM GDWLNKQLRL PVSNSLNKSD VIEIDLGPGS PQLANGNADE SADGSDTYSE
0601: SSGGTSDALA IEQRRAYKLE LQEGISLFNR KPTKGIEFLI NAGKVGESPE EIAGFLKDAS GLNKTLIGDY LGEREDLALK VMHAYVDSFD FRGMEFDEAI
0701: RTFLEGFRLP GEAQKIDRIM EKFAERYCKC NPKVFTSADS AYVLAYSVIM LNTDAHNPMV KNKMSADDFI RNNRGIDDGK DLPADYMRSL YERITKHEIK
0801: MKEDDLRLQQ KQYANSNRML GLDGILNIVI RKQWGDSYAE TSDDLMKHMQ EQFKEKARKS ESTYYAATDV VILRFMIEAC WAPMLAAFSV PLDQSDDLIV
0901: INICLEGFHH AIHATSLMSM KTHRDAFVTS LAKFTSLHSP ADIKQRNIEA IKAILRLADE EGNYLQDAWE HILTCVSRFE QLHLLGEGAP PDATFFASKQ
1001: NESEKSKQPK QYILPVLKRK GPGKSQYAAT GVLRGSYDSM SLGGKGSKNV RQEQMSSIVS NLNLLEQVGE MNQVFSQSQK LNSEAIIDFV KALCKVSMDE
1101: LRSPSNPRVF SLTKIVEIAH YNMNRIRLVW SSIWQVLSGF FVTIGCSENL SIAIFAMDSL RQLSMKFLER EELANYNFQN EFMTPFVIVM RRSNDVEIRE
1201: LIIRCVSQMV LSRVNNVKSG WKSMFMVFTT AAYDDHKNIV FLSFEIIEKI IREYFPYITE TETTTFTDCV NCLVAFTNNR FSKDISLSSI AFLRYCATKL
1301: AEGDLNSPST NKYKGTSGKI PQSSLHSGKS GKQENGEIVN NNHLYFWFPL LSGLSELSFD PRPEIRKSAL QIMFDTLRNH GHLFSLPLWE KVFESVLFPI
1401: FDYVRHSIDP SGEDESADQG SSGGEVDELD HDAWLYETCT LALQLVVDLF VKFYTTVNPL LEKVLMLLVS FIKRPHQSLA GIGIAAFVRL MSDADGLFSE
1501: EKWLEVVSAL KEAAKTTCPD FSYFLSEEYV ARSQRSALNI QNSNAESAAP TATDGNEESQ RTATHLYAAI SDAKCRAAVQ LLLIQAVMEI YNMYRPQLSA
1601: KNTLVLVDAL HGVALHAHGI NSNTILRSRL QELGPMTQMQ DPPLLRLENE SYQICLTFLQ NLVADKTKKE EEEEEEEIES LLVNICQEVL NFYIETSSSA
1701: KKLQSESSRA SEYRWRIPLG SGKRRELSAR APLIVATLQA MCTLDEASFE KNLKCLFPLL ANLISCEHGS NEVQTALADM LGLSVGPVLL QWC
Arabidopsis Description
BIG2Brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZX8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.