Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38039 | Canola | cytosol | 94.11 | 93.95 |
| Bra032659.1-P | Field mustard | cytosol, plastid | 94.06 | 93.95 |
| KRH00582 | Soybean | extracellular, golgi | 11.2 | 82.01 |
| KRH00580 | Soybean | cytosol | 75.43 | 74.03 |
| VIT_15s0048g00800.t01 | Wine grape | cytosol | 75.2 | 73.97 |
| KRH65253 | Soybean | cytosol | 74.86 | 73.51 |
| KRH40586 | Soybean | cytosol | 74.57 | 73.15 |
| KRH76287 | Soybean | cytosol | 75.49 | 73.06 |
| Solyc01g091460.2.1 | Tomato | extracellular | 73.14 | 71.99 |
| PGSC0003DMT400033251 | Potato | cytosol | 72.91 | 71.77 |
| AT3G60860.1 | Thale cress | cytosol | 72.63 | 70.89 |
| GSMUA_Achr5P18830_001 | Banana | cytosol | 67.89 | 69.39 |
| GSMUA_Achr8P19420_001 | Banana | cytosol | 67.71 | 68.03 |
| Os03t0246800-02 | Rice | plasma membrane | 27.03 | 66.43 |
| KRH00583 | Soybean | endoplasmic reticulum, vacuole | 5.54 | 65.99 |
| Zm00001d028438_P002 | Maize | plastid | 67.14 | 65.46 |
| EER92558 | Sorghum | cytosol | 67.09 | 65.44 |
| TraesCS4D01G225300.1 | Wheat | golgi, unclear | 66.8 | 65.38 |
| HORVU4Hr1G063180.1 | Barley | plastid | 66.63 | 65.21 |
| TraesCS4A01G067400.1 | Wheat | plastid | 66.63 | 65.21 |
| TraesCS4B01G224700.1 | Wheat | plastid | 65.83 | 64.43 |
| AT4G38200.1 | Thale cress | cytosol, mitochondrion, plastid | 47.14 | 48.9 |
| AT4G35380.1 | Thale cress | cytosol, plasma membrane, plastid | 45.14 | 46.31 |
| AT3G43300.1 | Thale cress | cytosol | 33.89 | 33.73 |
| AT1G13980.1 | Thale cress | cytosol | 18.0 | 21.71 |
| AT5G39500.1 | Thale cress | cytosol | 17.37 | 21.07 |
| AT5G19610.1 | Thale cress | cytosol | 16.29 | 20.73 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.2 | EntrezGene:839301 | UniProt:A0A178WBT3 | ProteinID:AAF76474.1 |
| ProteinID:AEE27360.1 | InterPro:ARM-type_fold | ArrayExpress:AT1G01960 | EnsemblPlantsGene:AT1G01960 | RefSeq:AT1G01960 | TAIR:AT1G01960 |
| RefSeq:AT1G01960-TAIR-G | EnsemblPlants:AT1G01960.1 | TAIR:AT1G01960.1 | Unigene:At.17002 | ncoils:Coil | InterPro:DCB_dom |
| Symbol:EDA10 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0005829 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009561 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0032012 |
| GO:GO:0032588 | GO:GO:0065009 | InterPro:IPR000904 | InterPro:IPR023394 | InterPro:Mon2_C | RefSeq:NP_171698.1 |
| ProteinID:OAP15818.1 | PFAM:PF01369 | PFAM:PF09324 | PFAM:PF12783 | PFAM:PF16206 | PFAM:PF16213 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50190 | PANTHER:PTHR10663 | PANTHER:PTHR10663:SF108 | UniProt:Q9LPC5 | SMART:SM00222 | SUPFAM:SSF48371 |
| SUPFAM:SSF48425 | InterPro:Sec7_C | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf |
| UniParc:UPI000009D237 | SEG:seg | : | : | : | : |
Description
BIG3Brefeldin A-inhibited guanine nucleotide-exchange protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC5]
Coordinates
chr1:-:330588..337912
Molecular Weight (calculated)
194954.0 Da
IEP (calculated)
5.349
GRAVY (calculated)
-0.122
Length
1750 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASTEVDSRL GRVVIPALDK VIKNASWRKH SKLAHECKSV IERLRSPENS SPVADSESGS SIPGPLHDGG AAEYSLAESE IILSPLINAS STGVLKIVDP
0101: AVDCIQKLIA HGYVRGEADP TGGPEALLLS KLIETICKCH ELDDEGLELL VLKTLLTAVT SISLRIHGDS LLQIVRTCYG IYLGSRNVVN QATAKASLVQ
0201: MSVIVFRRME ADSSTVPIQP IVVAELMEPM DKSESDPSTT QSVQGFITKI MQDIDGVFNS ANAKGTFGGH DGAFETSLPG TANPTDLLDS TDKDMLDAKY
0301: WEISMYKSAL EGRKGELADG EVEKDDDSEV QIGNKLRRDA FLVFRALCKL SMKTPPKEDP ELMRGKIVAL ELLKILLENA GAVFRTSDRF LGAIKQYLCL
0401: SLLKNSASNL MIIFQLSCSI LLSLVSRFRA GLKAEIGVFF PMIVLRVLEN VAQPDFQQKM IVLRFLDKLC VDSQILVDIF INYDCDVNSS NIFERMVNGL
0501: LKTAQGVPPG TVTTLLPPQE AAMKLEAMKC LVAVLRSMGD WVNKQLRLPD PYSAKMLEIV DRNLEEGSHP VENGKGDGGH GGFERSDSQS ELSSGNSDAL
0601: AIEQRRAYKL ELQEGISIFN QKPKKGIEFL IKANKVGDSP EEIAAFLKDA SGLNKTLIGD YLGEREDLSL KVMHAYVDSF EFQGMEFDEA IRAFLRGFRL
0701: PGEAQKIDRI MEKFAERFCK CNPKDFSSAD TAYVLAYSVI LLNTDAHNPM VKSKMTADGF IRNNRGIDDG KDLPEEYLRA LYERISRNEI KMKDDGLGPQ
0801: QKQPTNSSRL LGLDTILNIV VPRRGDDMNM ETSDDLIRHM QERFKEKARK SESVYYAASD VIILRFMVEV CWAPMLAAFS VPLDQSDDAV ITTLCLEGFH
0901: HAIHVTSVMS LKTHRDAFVT SLAKFTSLHS PADIKQKNIE AIKAIVKLAE EEGNYLQDAW EHILTCVSRF EHLHLLGEGA PPDATFFAFP QTESGNSPLA
1001: KPNSVPAIKE RAPGKLQYAA SAMIRGSYDG SGVAGKASNT VTSEQMNNLI SNLNLLEQVG DMSRIFTRSQ RLNSEAIIDF VKALCKVSMD ELRSPSDPRV
1101: FSLTKIVEIA HYNMNRIRLV WSSIWHVLSD FFVTIGCSDN LSIAIFAMDS LRQLSMKFLE REELANYNFQ NEFMKPFVVV MRKSGAVEIR ELIIRCVSQM
1201: VLSRVDNVKS GWKSMFMIFT TAAHDAHKNI VFLSFEMVEK IIRDYFPHIT ETETTTFTDC VNCLVAFTNC KFEKDISLQA IAFLQYCARK LAEGYVGSSL
1301: RRNPPLSPQG GKIGKQDSGK FLESDEHLYS WFPLLAGLSE LSFDPRAEIR KVALKVLFDT LRNHGDHFSL ALWERVFESV LFRIFDYVRQ DVDPSEDDST
1401: DQRGYNGEVD QESWLYETCS LALQLVVDLF VNFYKTVNPL LKKVLMLFVS LIKRPHQSLA GAGIAALVRL MRDVGHQFSN EQWLEVVSCI KEAADATSPD
1501: FSYVTSEDLM EDVSNEDETN DNSNDALRRR NRQLHAVVTD AKSKASIQIF VIQAVTDIYD MYRMSLTANH MLMLFDAMHG IGSNAHKINA DLLLRSKLQE
1601: LGSSLESQEA PLLRLENESF QTCMTFLDNL ISDQPVGYNE AEIESHLISL CREVLEFYIN ISCSKEQSSR WAVPSGSGKK KELTARAPLV VAAIQTLGNM
1701: GESLFKKNLP ELFPLIATLI SCEHGSGEVQ VALSDMLQTS MGPVLLRSCC
0101: AVDCIQKLIA HGYVRGEADP TGGPEALLLS KLIETICKCH ELDDEGLELL VLKTLLTAVT SISLRIHGDS LLQIVRTCYG IYLGSRNVVN QATAKASLVQ
0201: MSVIVFRRME ADSSTVPIQP IVVAELMEPM DKSESDPSTT QSVQGFITKI MQDIDGVFNS ANAKGTFGGH DGAFETSLPG TANPTDLLDS TDKDMLDAKY
0301: WEISMYKSAL EGRKGELADG EVEKDDDSEV QIGNKLRRDA FLVFRALCKL SMKTPPKEDP ELMRGKIVAL ELLKILLENA GAVFRTSDRF LGAIKQYLCL
0401: SLLKNSASNL MIIFQLSCSI LLSLVSRFRA GLKAEIGVFF PMIVLRVLEN VAQPDFQQKM IVLRFLDKLC VDSQILVDIF INYDCDVNSS NIFERMVNGL
0501: LKTAQGVPPG TVTTLLPPQE AAMKLEAMKC LVAVLRSMGD WVNKQLRLPD PYSAKMLEIV DRNLEEGSHP VENGKGDGGH GGFERSDSQS ELSSGNSDAL
0601: AIEQRRAYKL ELQEGISIFN QKPKKGIEFL IKANKVGDSP EEIAAFLKDA SGLNKTLIGD YLGEREDLSL KVMHAYVDSF EFQGMEFDEA IRAFLRGFRL
0701: PGEAQKIDRI MEKFAERFCK CNPKDFSSAD TAYVLAYSVI LLNTDAHNPM VKSKMTADGF IRNNRGIDDG KDLPEEYLRA LYERISRNEI KMKDDGLGPQ
0801: QKQPTNSSRL LGLDTILNIV VPRRGDDMNM ETSDDLIRHM QERFKEKARK SESVYYAASD VIILRFMVEV CWAPMLAAFS VPLDQSDDAV ITTLCLEGFH
0901: HAIHVTSVMS LKTHRDAFVT SLAKFTSLHS PADIKQKNIE AIKAIVKLAE EEGNYLQDAW EHILTCVSRF EHLHLLGEGA PPDATFFAFP QTESGNSPLA
1001: KPNSVPAIKE RAPGKLQYAA SAMIRGSYDG SGVAGKASNT VTSEQMNNLI SNLNLLEQVG DMSRIFTRSQ RLNSEAIIDF VKALCKVSMD ELRSPSDPRV
1101: FSLTKIVEIA HYNMNRIRLV WSSIWHVLSD FFVTIGCSDN LSIAIFAMDS LRQLSMKFLE REELANYNFQ NEFMKPFVVV MRKSGAVEIR ELIIRCVSQM
1201: VLSRVDNVKS GWKSMFMIFT TAAHDAHKNI VFLSFEMVEK IIRDYFPHIT ETETTTFTDC VNCLVAFTNC KFEKDISLQA IAFLQYCARK LAEGYVGSSL
1301: RRNPPLSPQG GKIGKQDSGK FLESDEHLYS WFPLLAGLSE LSFDPRAEIR KVALKVLFDT LRNHGDHFSL ALWERVFESV LFRIFDYVRQ DVDPSEDDST
1401: DQRGYNGEVD QESWLYETCS LALQLVVDLF VNFYKTVNPL LKKVLMLFVS LIKRPHQSLA GAGIAALVRL MRDVGHQFSN EQWLEVVSCI KEAADATSPD
1501: FSYVTSEDLM EDVSNEDETN DNSNDALRRR NRQLHAVVTD AKSKASIQIF VIQAVTDIYD MYRMSLTANH MLMLFDAMHG IGSNAHKINA DLLLRSKLQE
1601: LGSSLESQEA PLLRLENESF QTCMTFLDNL ISDQPVGYNE AEIESHLISL CREVLEFYIN ISCSKEQSSR WAVPSGSGKK KELTARAPLV VAAIQTLGNM
1701: GESLFKKNLP ELFPLIATLI SCEHGSGEVQ VALSDMLQTS MGPVLLRSCC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.