Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra002249.1-P | Field mustard | cytosol | 92.58 | 92.72 |
CDX92516 | Canola | cytosol | 92.58 | 92.72 |
CDY58967 | Canola | cytosol | 92.44 | 92.57 |
VIT_11s0016g04100.t01 | Wine grape | cytosol | 65.89 | 65.18 |
PGSC0003DMT400019795 | Potato | cytosol | 64.8 | 64.52 |
KRH39264 | Soybean | cytosol | 60.65 | 60.74 |
Solyc03g070470.1.1 | Tomato | nucleus | 64.15 | 57.57 |
GSMUA_Achr1P23070_001 | Banana | cytosol, nucleus, peroxisome | 42.18 | 56.97 |
KRH48417 | Soybean | cytosol | 39.85 | 56.55 |
TraesCS3B01G274600.1 | Wheat | cytosol | 54.04 | 53.53 |
TraesCS3D01G246200.1 | Wheat | cytosol | 53.96 | 53.42 |
TraesCS3A01G245300.1 | Wheat | cytosol | 53.82 | 53.39 |
HORVU3Hr1G068070.2 | Barley | cytosol | 53.53 | 53.1 |
Os04t0117300-01 | Rice | cytosol, plasma membrane | 26.04 | 52.88 |
EES17039 | Sorghum | cytosol | 52.95 | 51.56 |
Zm00001d041752_P001 | Maize | cytosol | 52.44 | 51.13 |
AT1G13980.1 | Thale cress | cytosol | 43.35 | 41.08 |
AT5G39500.1 | Thale cress | cytosol | 37.6 | 35.83 |
AT4G38200.1 | Thale cress | cytosol, mitochondrion, plastid | 20.15 | 16.42 |
AT1G01960.1 | Thale cress | cytosol | 20.73 | 16.29 |
AT4G35380.1 | Thale cress | cytosol, plasma membrane, plastid | 19.13 | 15.42 |
AT3G60860.1 | Thale cress | cytosol | 20.07 | 15.39 |
AT3G43300.1 | Thale cress | cytosol | 17.53 | 13.71 |
Protein Annotations
Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | EntrezGene:832081 | ProteinID:AED92730.1 | EMBL:AF296838 |
InterPro:ARM-type_fold | ArrayExpress:AT5G19610 | EnsemblPlantsGene:AT5G19610 | RefSeq:AT5G19610 | TAIR:AT5G19610 | RefSeq:AT5G19610-TAIR-G |
EnsemblPlants:AT5G19610.1 | TAIR:AT5G19610.1 | Unigene:At.54918 | ncoils:Coil | UniProt:F4K2K3 | Symbol:GNL2 |
GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005085 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 |
GO:GO:0005829 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009846 |
GO:GO:0009856 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0032012 |
GO:GO:0065009 | GO:GO:0090406 | InterPro:IPR000904 | InterPro:IPR023394 | RefSeq:NP_197462.1 | PFAM:PF01369 |
PFAM:PF12783 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009032 |
PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50190 | PANTHER:PTHR44190 |
PANTHER:PTHR44190:SF2 | SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N |
InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI000016250F | SEG:seg | : | : |
Description
GNL2ARF guanine-nucleotide exchange factor GNL2 [Source:UniProtKB/Swiss-Prot;Acc:F4K2K3]
Coordinates
chr5:-:6617665..6622104
Molecular Weight (calculated)
156251.0 Da
IEP (calculated)
4.767
GRAVY (calculated)
-0.106
Length
1375 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRIAVRAKR KELGISCMLN TEVGAVLAVI RRPLSESYLS PQETDHCDSS VQQSLKSLRA LIFNPQQDWR TIDPSVYLSP FLEVIQSDEI PASATAVALS
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.