Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400019795 | Potato | cytosol | 69.86 | 70.31 |
| CDY58967 | Canola | cytosol | 66.19 | 67.01 |
| Bra002249.1-P | Field mustard | cytosol | 66.04 | 66.86 |
| CDX92516 | Canola | cytosol | 66.04 | 66.86 |
| AT5G19610.1 | Thale cress | cytosol | 65.18 | 65.89 |
| KRH39264 | Soybean | cytosol | 64.75 | 65.55 |
| GSMUA_Achr1P23070_001 | Banana | cytosol, nucleus, peroxisome | 46.47 | 63.46 |
| Solyc03g070470.1.1 | Tomato | nucleus | 69.35 | 62.92 |
| KRH48417 | Soybean | cytosol | 42.81 | 61.4 |
| TraesCS3B01G274600.1 | Wheat | cytosol | 59.35 | 59.44 |
| TraesCS3D01G246200.1 | Wheat | cytosol | 59.35 | 59.4 |
| TraesCS3A01G245300.1 | Wheat | cytosol | 59.06 | 59.24 |
| HORVU3Hr1G068070.2 | Barley | cytosol | 58.85 | 59.02 |
| EES17039 | Sorghum | cytosol | 58.06 | 57.15 |
| Zm00001d041752_P001 | Maize | cytosol | 57.91 | 57.09 |
| Os04t0117300-01 | Rice | cytosol, plasma membrane | 26.69 | 54.8 |
| VIT_02s0012g01790.t01 | Wine grape | cytosol | 43.67 | 41.29 |
| VIT_03s0038g04090.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 20.07 | 16.39 |
| VIT_15s0048g00800.t01 | Wine grape | cytosol | 20.79 | 16.25 |
| VIT_11s0016g00170.t01 | Wine grape | cytosol, plastid | 18.85 | 14.58 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | EntrezGene:100255904 | wikigene:100255904 | MapMan:22.3.3.1 | ProteinID:CCB51526 |
| ProteinID:CCB51526.1 | ncoils:Coil | UniProt:F6HH30 | EMBL:FN595756 | GO:GO:0003674 | GO:GO:0005086 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016192 | GO:GO:0032012 | GO:GO:0065009 | InterPro:IPR000904 | InterPro:IPR023394 |
| EntrezGene:LOC100255904 | wikigene:LOC100255904 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 | PANTHER:PTHR44190 |
| PANTHER:PTHR44190:SF2 | SMART:SM00222 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf | InterPro:Sec7_N | InterPro:Sec7_dom |
| InterPro:Sec7_dom_sf | UniParc:UPI000198418A | ArrayExpress:VIT_11s0016g04100 | EnsemblPlantsGene:VIT_11s0016g04100 | EnsemblPlants:VIT_11s0016g04100.t01 | RefSeq:XP_002281184 |
| RefSeq:XP_002281184.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:3358818..3363084
Molecular Weight (calculated)
157900.0 Da
IEP (calculated)
4.825
GRAVY (calculated)
-0.133
Length
1390 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEKTRDDNGE EEEEENKPKN VRELRRRELG LSCMLNTEVG AVLAVIRRPS DTNSQFLAAQ EDNFDSSLLH SLKSLRALIF NPQQEWRTID PSIYLAPFLD
0101: VVQSDDVPAT ATGVALSAIF MILKLEIFDE KTPGARDAVN SIVTGITTCR LERTDPISED AILMKILHVL TEIMKKRASI LLTDHAVCTI VNTCFQVVQQ
0201: SAIRGDLLQR GARHTMQELI QTIFSRFPEI NKDRDKSLND FQDGDINNEM ESGYGVRSAV DIFSFLCSLL NVVEVVDMDG SQVQTADEDV QLFALVLINS
0301: AIQLSGDEIG KQPKLLRMIE DDLFHHLIHY GMCSSPLVLS MICSTVLNIY NFLRRFIRLQ LEAFFTFVSF RVAVQASSSL QLKEVALEAV INFCRQPTFI
0401: FEAYANYDCH IIFRDVFEEI GRLLCKHAFP TGSPLSTLQI QAFEGLVIMI HNISDHVDGE HDSSSSGPYP VEITEYRPFW DENFKANDSE DWADHARLRK
0501: AQKRKIKIAG DHFNRDEKKG LDYLKISHLV PDPPDPKPFA YFFRYTPGLD KSMIGDYLGS PDELNLQVLK EFTETFNFSG MILDNALRTY LETFRLPGES
0601: QKIQRILEAF SERFYDQQSS EIFVSKDAVF ILCYSLIMLN TDQHNPQVKK KMTEEEFIKN NRAINGGKDL PREYLSELFQ SISNKAISLF GQSGQPVEMN
0701: PSRWIELINR SRNSEPFIKC DFDHRLGRDM FAAIAGPTVA ALSAIFEHSD EDEIINECMQ GLISVARIAQ YGLQDTLDEL LASFCKFTTL LNPYASAEET
0801: LYAFSNDLKA RMATLAVFTI ANNFGHSIKG GWRNIVDCLL KLRRLKLLPQ SVVEPEIAST SSSDLQMHTR SDSGVIFPSY ESSFDSNCQT SSMMSRFSHF
0901: LSMETADDSL TLGGSEFERN LKIIQQCRIG NIFSNSSKLP DDALPNLGRS LIFAAAGKGQ KFSTPIEEEE TVGFCWDLLI SIALANVHRF STFWPYFHDY
1001: LLAVAQFPLF SPVPFVEKAM LGLFKICLKV LSSYQSDKLL EELIFKSINL MWKLDKEILD TCCEYITQSV SKILIEYPAN LQSQLGWKSV LQLLSITGRH
1101: PETYDQAVET LIMLMSDGFH VSRSNYPFCI DCAFGFIALK NSPLEKNLKL LDLLADSVNL LIQWSKNGYS DPGNNLSIAS STSSSSFEDN SKFNPSNFSM
1201: NLFIKLGEAL RRTSLARREE IRNHAIVALQ RSFTLADELD FTSVSCINCF NLVIFAMVDD LHEKMVEYSR RDNLEREVRS MEGTLKIAME LLTDVFLQFL
1301: KPLTENSGFR TFWLGVLRRM DTCMKADLGG YGETTLQELI PDLLRKMITI MKEKQILVQK EGEDLWEITY IQIQWIAPSL KDELFPDEDL
0101: VVQSDDVPAT ATGVALSAIF MILKLEIFDE KTPGARDAVN SIVTGITTCR LERTDPISED AILMKILHVL TEIMKKRASI LLTDHAVCTI VNTCFQVVQQ
0201: SAIRGDLLQR GARHTMQELI QTIFSRFPEI NKDRDKSLND FQDGDINNEM ESGYGVRSAV DIFSFLCSLL NVVEVVDMDG SQVQTADEDV QLFALVLINS
0301: AIQLSGDEIG KQPKLLRMIE DDLFHHLIHY GMCSSPLVLS MICSTVLNIY NFLRRFIRLQ LEAFFTFVSF RVAVQASSSL QLKEVALEAV INFCRQPTFI
0401: FEAYANYDCH IIFRDVFEEI GRLLCKHAFP TGSPLSTLQI QAFEGLVIMI HNISDHVDGE HDSSSSGPYP VEITEYRPFW DENFKANDSE DWADHARLRK
0501: AQKRKIKIAG DHFNRDEKKG LDYLKISHLV PDPPDPKPFA YFFRYTPGLD KSMIGDYLGS PDELNLQVLK EFTETFNFSG MILDNALRTY LETFRLPGES
0601: QKIQRILEAF SERFYDQQSS EIFVSKDAVF ILCYSLIMLN TDQHNPQVKK KMTEEEFIKN NRAINGGKDL PREYLSELFQ SISNKAISLF GQSGQPVEMN
0701: PSRWIELINR SRNSEPFIKC DFDHRLGRDM FAAIAGPTVA ALSAIFEHSD EDEIINECMQ GLISVARIAQ YGLQDTLDEL LASFCKFTTL LNPYASAEET
0801: LYAFSNDLKA RMATLAVFTI ANNFGHSIKG GWRNIVDCLL KLRRLKLLPQ SVVEPEIAST SSSDLQMHTR SDSGVIFPSY ESSFDSNCQT SSMMSRFSHF
0901: LSMETADDSL TLGGSEFERN LKIIQQCRIG NIFSNSSKLP DDALPNLGRS LIFAAAGKGQ KFSTPIEEEE TVGFCWDLLI SIALANVHRF STFWPYFHDY
1001: LLAVAQFPLF SPVPFVEKAM LGLFKICLKV LSSYQSDKLL EELIFKSINL MWKLDKEILD TCCEYITQSV SKILIEYPAN LQSQLGWKSV LQLLSITGRH
1101: PETYDQAVET LIMLMSDGFH VSRSNYPFCI DCAFGFIALK NSPLEKNLKL LDLLADSVNL LIQWSKNGYS DPGNNLSIAS STSSSSFEDN SKFNPSNFSM
1201: NLFIKLGEAL RRTSLARREE IRNHAIVALQ RSFTLADELD FTSVSCINCF NLVIFAMVDD LHEKMVEYSR RDNLEREVRS MEGTLKIAME LLTDVFLQFL
1301: KPLTENSGFR TFWLGVLRRM DTCMKADLGG YGETTLQELI PDLLRKMITI MKEKQILVQK EGEDLWEITY IQIQWIAPSL KDELFPDEDL
0001: MDRIAVRAKR KELGISCMLN TEVGAVLAVI RRPLSESYLS PQETDHCDSS VQQSLKSLRA LIFNPQQDWR TIDPSVYLSP FLEVIQSDEI PASATAVALS
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
Arabidopsis Description
GNL2ARF guanine-nucleotide exchange factor GNL2 [Source:UniProtKB/Swiss-Prot;Acc:F4K2K3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.