Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0117300-01 | Rice | cytosol, plasma membrane | 38.21 | 57.46 |
| HORVU3Hr1G068070.2 | Barley | cytosol | 68.96 | 50.65 |
| TraesCS3B01G274600.1 | Wheat | cytosol | 68.76 | 50.43 |
| TraesCS3D01G246200.1 | Wheat | cytosol | 68.76 | 50.4 |
| TraesCS3A01G245300.1 | Wheat | cytosol | 68.57 | 50.36 |
| EES17039 | Sorghum | cytosol | 67.58 | 48.73 |
| Zm00001d041752_P001 | Maize | cytosol | 66.9 | 48.3 |
| VIT_11s0016g04100.t01 | Wine grape | cytosol | 63.46 | 46.47 |
| PGSC0003DMT400019795 | Potato | cytosol | 60.61 | 44.68 |
| CDY58967 | Canola | cytosol | 58.35 | 43.26 |
| Bra002249.1-P | Field mustard | cytosol | 58.25 | 43.19 |
| CDX92516 | Canola | cytosol | 58.25 | 43.19 |
| KRH39264 | Soybean | cytosol | 57.17 | 42.39 |
| AT5G19610.1 | Thale cress | cytosol | 56.97 | 42.18 |
| Solyc03g070470.1.1 | Tomato | nucleus | 60.02 | 39.88 |
| GSMUA_Achr6P03140_001 | Banana | cytosol, nucleus, plastid | 32.12 | 39.88 |
| KRH48417 | Soybean | cytosol | 37.23 | 39.11 |
| GSMUA_Achr6P22810_001 | Banana | golgi | 34.97 | 30.74 |
| GSMUA_Achr8P19420_001 | Banana | cytosol | 19.84 | 11.6 |
| GSMUA_Achr5P18830_001 | Banana | cytosol | 19.06 | 11.33 |
| GSMUA_Achr1P09290_001 | Banana | mitochondrion | 17.68 | 10.82 |
| GSMUA_Achr2P14140_001 | Banana | cytosol, extracellular, nucleus | 16.4 | 9.48 |
| GSMUA_Achr4P27650_001 | Banana | cytosol, extracellular, plastid | 16.4 | 9.3 |
| GSMUA_Achr8P34520_001 | Banana | cytosol | 1.38 | 6.28 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.1 | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009846 | GO:GO:0009856 | GO:GO:0009987 |
| GO:GO:0032012 | GO:GO:0065009 | GO:GO:0090406 | EnsemblPlantsGene:GSMUA_Achr1G23070_001 | EnsemblPlants:GSMUA_Achr1P23070_001 | EnsemblPlants:GSMUA_Achr1T23070_001 |
| InterPro:IPR000904 | InterPro:IPR023394 | UniProt:M0S2B5 | PFAM:PF01369 | PFAM:PF12783 | PFscan:PS50190 |
| PANTHER:PTHR44190 | PANTHER:PTHR44190:SF2 | SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C_sf |
| InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf | UniParc:UPI0002962E4C | SEG:seg | : |
Description
Putative Pattern formation protein EMB30 [Source:GMGC_GENE;Acc:GSMUA_Achr1G23070_001]
Coordinates
chr1:+:17329982..17334095
Molecular Weight (calculated)
113513.0 Da
IEP (calculated)
5.121
GRAVY (calculated)
-0.014
Length
1018 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLNAEVGAVL AVMRRPHDPG VASPDEAANP HLLHSLKALR SLLFHPRQLG EWRATDPSVY LSPFLDVVQS DDVPAAATGV ALSTVLKVLK LDVFDEHTPG
0101: ARDAIHSIVF AVTNCRLENT DSASEDAVLM RVLQVLTAVM RTRASVLLTD HAVCTLVNTC FQVVQQSAHR GDLLQRSARH AMHELVQAIF VRLPDVRVPV
0201: ERPEAEDEVA TTGSYGARCM VDIFHFLCSL LNVGEVIDYA DSVGSISSDE DVQLFALVLI NSTIELGGEA IGKHPKLLRI IQDDLFHHLI HYATHTSPLV
0301: LSMICSTVLH LYNFLRRCLR LQLEALFTYV MLRIAAGSNG AQLQEVAVEG ITSFCHQPNF VIETYVNYDC DPLRHNVLEE AARLLCKIAF PVGTPMSPLQ
0401: IQAFGGIVTI ITTIADNIEV DQAPDREAYN IDVSDYKPFW VEKCDNSDNS DTWVEFVRMR KLKKKKILIA ANHYNRDDKK GLDFLKLSKL VPSPPEPKSL
0501: AYFFRFTPGL DKNKIGDFLG DPDEFNIQVL NEFTGTFDFT GVILDIALRS YLETFRLPGE SQKIQRILEA FSDRFYEQQS SEIFASKDAL TNLLNPYATA
0601: EETLLTFSNE LKPRMATLAL FTIANKFGES IRGAWKNMID CLLKLKRLKL LPQSVIEPDT ALAADSKAQT HAKSESGVIF PASHRGAGSN RSVSGLIGRF
0701: SQFLSLDNSN DSMISFGSEL ENNLKIIQQC QIGDIFSKSS KLPDESLQNM GRALIFAAAG KGQKFSTPVE EEEIFHESFA IVSQFPLFSP CPFAEKAIVG
0801: LFKIAVKLTA SPSRLDKLPE ELIFKSINLM WKLDKEILDT CCESIAESTM QILNAGGSAG NLGANLFMKL VEALRKTSLV RREEIRNQAV AELRKCFAAA
0901: EELDFSPANC LACFNLVIFA MVDDLHEKML EYSRRENSER EMRSMEGTLK VAMEMLADLG DHVGVLQELV PVLLKKMIVE MKEKEVLVQE DGNELWDITN
1001: IQIQWIAPSV KDELFPEE
0101: ARDAIHSIVF AVTNCRLENT DSASEDAVLM RVLQVLTAVM RTRASVLLTD HAVCTLVNTC FQVVQQSAHR GDLLQRSARH AMHELVQAIF VRLPDVRVPV
0201: ERPEAEDEVA TTGSYGARCM VDIFHFLCSL LNVGEVIDYA DSVGSISSDE DVQLFALVLI NSTIELGGEA IGKHPKLLRI IQDDLFHHLI HYATHTSPLV
0301: LSMICSTVLH LYNFLRRCLR LQLEALFTYV MLRIAAGSNG AQLQEVAVEG ITSFCHQPNF VIETYVNYDC DPLRHNVLEE AARLLCKIAF PVGTPMSPLQ
0401: IQAFGGIVTI ITTIADNIEV DQAPDREAYN IDVSDYKPFW VEKCDNSDNS DTWVEFVRMR KLKKKKILIA ANHYNRDDKK GLDFLKLSKL VPSPPEPKSL
0501: AYFFRFTPGL DKNKIGDFLG DPDEFNIQVL NEFTGTFDFT GVILDIALRS YLETFRLPGE SQKIQRILEA FSDRFYEQQS SEIFASKDAL TNLLNPYATA
0601: EETLLTFSNE LKPRMATLAL FTIANKFGES IRGAWKNMID CLLKLKRLKL LPQSVIEPDT ALAADSKAQT HAKSESGVIF PASHRGAGSN RSVSGLIGRF
0701: SQFLSLDNSN DSMISFGSEL ENNLKIIQQC QIGDIFSKSS KLPDESLQNM GRALIFAAAG KGQKFSTPVE EEEIFHESFA IVSQFPLFSP CPFAEKAIVG
0801: LFKIAVKLTA SPSRLDKLPE ELIFKSINLM WKLDKEILDT CCESIAESTM QILNAGGSAG NLGANLFMKL VEALRKTSLV RREEIRNQAV AELRKCFAAA
0901: EELDFSPANC LACFNLVIFA MVDDLHEKML EYSRRENSER EMRSMEGTLK VAMEMLADLG DHVGVLQELV PVLLKKMIVE MKEKEVLVQE DGNELWDITN
1001: IQIQWIAPSV KDELFPEE
0001: MDRIAVRAKR KELGISCMLN TEVGAVLAVI RRPLSESYLS PQETDHCDSS VQQSLKSLRA LIFNPQQDWR TIDPSVYLSP FLEVIQSDEI PASATAVALS
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
Arabidopsis Description
GNL2ARF guanine-nucleotide exchange factor GNL2 [Source:UniProtKB/Swiss-Prot;Acc:F4K2K3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.