Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • cytosol 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G246200.1 Wheat cytosol 96.18 95.97
TraesCS3B01G274600.1 Wheat cytosol 95.96 95.82
TraesCS3A01G245300.1 Wheat cytosol 95.67 95.67
Os04t0117300-01 Rice cytosol, plasma membrane 40.91 83.75
EES17039 Sorghum cytosol 83.48 81.94
Zm00001d041752_P001 Maize cytosol 83.26 81.84
GSMUA_Achr1P23070_001 Banana cytosol, nucleus, peroxisome 50.65 68.96
VIT_11s0016g04100.t01 Wine grape cytosol 59.02 58.85
PGSC0003DMT400019795 Potato cytosol 56.85 57.06
Bra002249.1-P Field mustard cytosol 54.33 54.84
CDY58967 Canola cytosol 54.33 54.84
CDX92516 Canola cytosol 54.33 54.84
KRH39264 Soybean cytosol 53.17 53.68
AT5G19610.1 Thale cress cytosol 53.1 53.53
Solyc03g070470.1.1 Tomato nucleus 56.57 51.17
KRH48417 Soybean cytosol 33.84 48.4
HORVU5Hr1G088970.4 Barley plastid 35.28 37.21
HORVU3Hr1G017750.4 Barley cytosol 25.69 36.03
HORVU4Hr1G002880.3 Barley cytosol 36.72 35.79
HORVU4Hr1G063180.1 Barley plastid 21.14 16.39
HORVU6Hr1G034130.6 Barley plastid 19.84 16.31
HORVU7Hr1G093440.3 Barley plastid 19.48 16.02
HORVU2Hr1G040020.14 Barley cytosol 18.54 14.99
HORVU4Hr1G022040.1 Barley cytosol 0.14 3.33
HORVU1Hr1G028090.1 Barley endoplasmic reticulum 0.07 1.85
HORVU1Hr1G033990.1 Barley endoplasmic reticulum, vacuole 0.0 0.0
Protein Annotations
Gene3D:1.10.1000.11Gene3D:1.10.220.20MapMan:22.3.3.1EMBL:AK374063InterPro:ARM-type_foldUniProt:F2ED38
GO:GO:0000003GO:GO:0003674GO:GO:0005086GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009846GO:GO:0009856
GO:GO:0009987GO:GO:0032012GO:GO:0065009GO:GO:0090406EnsemblPlantsGene:HORVU3Hr1G068070EnsemblPlants:HORVU3Hr1G068070.2
InterPro:IPR000904InterPro:IPR023394PFAM:PF01369PFAM:PF12783PFscan:PS50190PANTHER:PTHR44190
PANTHER:PTHR44190:SF2SMART:SM00222SUPFAM:SSF48371SUPFAM:SSF48425InterPro:Sec7_C_sfInterPro:Sec7_N
InterPro:Sec7_domInterPro:Sec7_dom_sfUniParc:UPI0002008449SEG:seg::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2ED38]
Coordinates
chrchr3H:+:516630487..516635102
Molecular Weight (calculated)
154163.0 Da
IEP (calculated)
5.358
GRAVY (calculated)
0.024
Length
1386 amino acids
Sequence
(BLAST)
0001: MARTPASDDD DDGPPTYTVA RGTRRDPRLK DLGISCMLNT EVAALLAVIR RRPDPYSYLP PAVAAAEEAV FAGLIQSLKS LRALLFQPRH GAWRCSDPSM
0101: YLSPFLDVVQ SEEVPPAATG VALSSVLKIL RIDVFDECSP GARDAIQAIL TAVTNCRIER IADSGAEEAV LLRVLQVLAA LLRARAAPLL SDSAVCTVVN
0201: TCFQVVQHAA SSRGSELLQR TARHCMHEIL QAVFARLPDI REKAEDDMSV TSAAGFGARC MVDVFNFLCS LLLNATDMVM TPEGHGAFTS EEDVQLFALV
0301: LLNSAVELGG EAIGKHPKLL HLIQDDLFYH LIHYATECSP LVLSMICSTV LNLYNFLRRF LKLQLEAFFM YVILRVGGGA NGMQLQEVAI EGLISFCRQP
0401: TFVIEMYVNY DCDPLMRNVY EEVGKLLCKA AYPLSNPMTT VQLQAFEGLV NMITTIADNV EVEKAPEQEA YNVEISEYRL FWVERWDSSE DHGHETWVDF
0501: VRKRKLKKKK VAIAANHYNR DEKKGVEFLK LCHLVPTPPE PKSMAYFLRY SPGLDKVKIG EFLGDPDEFN LKVLKEFTDT FDFAGSILDT ALRTFLETFR
0601: LPGESQKIQR VLEHFSERFY EQQTQEVFAT KDAAFILCYS VIMLNTDLHN PQVKKKMSED DFIRNNRAIN SGKDLPREYL SELFHSIAVN AITMFSQGTT
0701: NIEMTTSRWA EIVKRSRSIE PFTPCDFKHK LSREVFIAVS GPAVATLAAI FDYTDDEEIL NQCVEGLISV ARIARYGLED VLDELLCCLC KFTTLLNPYA
0801: TTEETIFTFS NELKPRMSTL ALFTIANRFG ESVRGAWKNI IDCLLKLKRL KLLPQSVIEQ DGTVSSRLGH RGKSDSGVIF PSSERGAGTS RHVSGMIGRF
0901: SQFMSLDGGG ESLLTVGSEF ENNLKIIQQC QIGSMFTESG KLPDESLQNL GRALIFAAGG KGQKFSTPIE EEETVAFCWD LILLVSLANL ERFASFWQHM
1001: HDCFTAVSQL PLFSACPFAE KAIVVLFKVA VKLLPGQPSP DRVAEELICK SINLMWKLDK EILDTCCEGI SECIVKLIME HAGSVQTPIG WKTLLHLLSV
1101: TGRHPETFDQ SVAAMIKLMS DGAHISRFNY AACIEAAFGF AALKISPLEI STRILALMAD SVKCIVQWHK SGYSDPGSGN SSSSVEEASR MGNLATNMFI
1201: KLAETLRKTS LVRREEIRNQ AVADLGRSFS LAAAGDLDLG PAGCLACFNL VIFAMVDDLH EKTLEYSRRE GAERETRSME GTLAAATELL ADVFVLFLGT
1301: LAQGPGFRTF WLGVLRRMDT CIKSDLAAGG GAGVMQELVP RMLKRMILEM KNKEVLVQRE GDELWEITHI QIQWIAPAVN EELFPE
Best Arabidopsis Sequence Match ( AT5G19610.1 )
(BLAST)
0001: MDRIAVRAKR KELGISCMLN TEVGAVLAVI RRPLSESYLS PQETDHCDSS VQQSLKSLRA LIFNPQQDWR TIDPSVYLSP FLEVIQSDEI PASATAVALS
0101: SILKILKIEI FDEKTPGAKD AMNSIVSGIT SCRLEKTDLV SEDAVMMRIL QVLTGIMKHP SSELLEDQAV CTIVNTCFQV VQQSTGRGDL LQRNGRYTMH
0201: ELIQIIFSRL PDFEVRGDEG GEDSESDTDE IDMSGGYGIR CCIDIFHFLC SLLNVVEVVE NLEGTNVHTA DEDVQIFALV LINSAIELSG DAIGQHPKLL
0301: RMVQDDLFHH LIHYGASSSP LVLSMICSCI LNIYHFLRKF MRLQLEAFFS FVLLRVTAFT GFLPLQEVAL EGLINFCRQP AFIVEAYVNY DCDPMCRNIF
0401: EETGKVLCRH TFPTSGPLTS IQIQAFEGLV ILIHNIADNM DREEDEGNEE DDNNSNVIKP SPVEIHEYIP FWIDKPKEDF ETWVDHIRVR KAQKRKLAIA
0501: ANHFNRDEKK GLEYLKYNYL VSDPLDPMAL ASFFRFTPGL DKTMIGDYLG DPDELHLSVL RSFTHTFEFT GMNLDTALRT FLESFRLPGE SQKIERMIEA
0601: FSERFYDQQS SDIFASKDTV HILCYSLIML NTDQHNPQVR RKMTEDEFIR NNRAINAGND LPKEYLSELF QSIATNAFAL STHSGPVEMN PNRWIELMNR
0701: TKTTQPFSLC QFDRRIGRDM FATIAGPSIA AVSAFFEHSD DDEVLHECVD AMISIARVAQ YGLEDILDEL IASFCKFTTL LNPYTTPEET LFAFSHDMKP
0801: RMATLAVFTL ANTFGDSIRG GWRNIVDCLL KLRKLQLLPQ SVIEFEINEE NGGSESDMNN VSSQDTKFNR RQGSSLMGRF SHFLALDNVE ESVALGMSEF
0901: EQNLKVIKQC RIGQIFSKSS VLPDVAVLNL GRSLIYAAAG KGQKFSTAIE EEETVKFCWD LIITIALSNV HRFNMFWPSY HEYLLNVANF PLFSPIPFVE
1001: KGLPGLFRVC IKILASNLQD HLPEELIFRS LTIMWKIDKE IIETCYDTIT EFVSKIIIDY SANLHTNIGW KSVLQLLSLC GRHPETKEQA VDALIGLMSF
1101: NASHLSQSSY AYCIDCAFSF VALRNSSVEK NLKILDLMAD SVTMLVKWYK TASTDTANSY SPASNTSSSS SMEENNLRGV NFVHHLFLKL SEAFRKTTLA
1201: RREEIRNRAV TSLEKSFTMG HEDLGFTPSG CIYCIDHVIF PTIDDLHEKL LDYSRRENAE REMRSMEGTL KIAMKVLMNV FLVYLEQIVE SAEFRTFWLG
1301: VLRRMDTCMK ADLGEYGDNK LQEVVPELLT TMIGTMKEKE ILVQKEDDDL WEITYIQIQW IAPALKDELF PDEEI
Arabidopsis Description
GNL2ARF guanine-nucleotide exchange factor GNL2 [Source:UniProtKB/Swiss-Prot;Acc:F4K2K3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.