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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • plastid 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G157000.1 Wheat plastid 97.92 98.16
TraesCS6B01G195700.1 Wheat plastid 97.63 97.86
TraesCS6A01G168000.1 Wheat plastid 97.57 97.8
KXG29692 Sorghum plastid 87.25 86.78
Zm00001d053688_P002 Maize plastid 85.71 85.35
HORVU7Hr1G093440.3 Barley plastid 75.03 75.07
GSMUA_Achr8P34520_001 Banana cytosol 9.25 69.96
GSMUA_Achr1P09290_001 Banana mitochondrion 66.01 66.89
Solyc01g112350.2.1 Tomato extracellular, golgi, plasma membrane 52.79 64.87
VIT_03s0038g04090.t01 Wine grape mitochondrion, plasma membrane, plastid 63.4 62.81
KRH13998 Soybean plastid 61.98 60.97
KRH74111 Soybean plastid 61.8 60.55
AT4G38200.1 Thale cress cytosol, mitochondrion, plastid 58.42 58.39
CDY59102 Canola cytosol, mitochondrion, plastid 58.6 58.32
CDY54791 Canola mitochondrion, nucleus, plastid 58.54 58.26
Bra033555.1-P Field mustard plastid 57.59 57.52
CDX69135 Canola plastid 55.93 55.86
CDX75498 Canola mitochondrion, plasma membrane, plastid 55.75 55.69
Bra011611.1-P Field mustard plastid 55.63 55.27
AT4G35380.1 Thale cress cytosol, plasma membrane, plastid 55.22 54.57
HORVU4Hr1G063180.1 Barley plastid 49.41 46.59
Solyc01g112340.2.1 Tomato plastid 9.91 39.95
HORVU2Hr1G040020.14 Barley cytosol 31.44 30.92
HORVU3Hr1G017750.4 Barley cytosol 13.23 22.57
HORVU5Hr1G088970.4 Barley plastid 16.01 20.55
HORVU1Hr1G028090.1 Barley endoplasmic reticulum 0.65 20.37
HORVU1Hr1G033990.1 Barley endoplasmic reticulum, vacuole 0.53 20.0
HORVU3Hr1G068070.2 Barley cytosol 16.31 19.84
HORVU4Hr1G002880.3 Barley cytosol 16.67 19.76
HORVU4Hr1G022040.1 Barley cytosol 0.53 15.0
Protein Annotations
Gene3D:1.10.1000.11Gene3D:1.10.220.20MapMan:22.3.3.2InterPro:ARM-type_foldInterPro:DCB_domGO:GO:0003674
GO:GO:0005086GO:GO:0005488GO:GO:0005515GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987GO:GO:0032012GO:GO:0065009EnsemblPlantsGene:HORVU6Hr1G034130EnsemblPlants:HORVU6Hr1G034130.6InterPro:IPR000904
InterPro:IPR023394UniProt:M0WZV9PFAM:PF01369PFAM:PF09324PFAM:PF12783PFAM:PF16213
PFscan:PS50190PANTHER:PTHR10663PANTHER:PTHR10663:SF108SMART:SM00222SUPFAM:SSF48371SUPFAM:SSF48425
InterPro:Sec7_CInterPro:Sec7_C_sfInterPro:Sec7_NInterPro:Sec7_domInterPro:Sec7_dom_sfUniParc:UPI000294B0F6
SEG:seg:::::
Description
No Description!
Coordinates
chrchr6H:-:158180584..158189715
Molecular Weight (calculated)
187169.0 Da
IEP (calculated)
5.624
GRAVY (calculated)
-0.018
Length
1686 amino acids
Sequence
(BLAST)
0001: MASPTAPLGG STPSGRVLGP ALDRIIKNAA WRKHSALVAA AKSALDLLSS SSYHSPDPTS PNPSPLLGLP VAAAAASLHA LILALESASP KVADPALDCV
0101: AKLLYHRLLL GDLGAAADDS PASKLLAAVL SCGALNDDAM ELATLRVLVA AARCPSIAIR GDGLGQMLKT CYNIYLSSSS GANQMCAKLA LAQVLVIVFA
0201: RVEVDSMDVR VPTVSITDMM DVSDRSLNDS GIVQVAQGFI NDAMEGSDVP EPGTPVAMAE VDEKDDEGMS KIREDGLALF KNLCKLSMKF STPDNPEDQV
0301: LLRGKVLSLE LLKMVVDNAG PFWRINEKYL GAIKQYLCLS LLKNSALSAM SIFQLLCSIF VGLLSRFRSG LKEEIGIFFP MLVLRVLENV HQPSFLQKMT
0401: VLNLLEDICK ESQVLIDIFV NYDCDVDAPN IFERIVNGLL KTALGVTPGA TTTLTPAQDQ TFRTESVKCL ATILKSMGSW MDQQLRIGDF SPKVSEVSLN
0501: SLDSPNILIG EDGNGIDYEL QTESYSPDTS DASSLEQRRA YKIELQKGIS MFNRKPSKGI DFLIKSKKIG QSPEDVASFL RNTAGLNATM IGDYLGERDE
0601: FPIKVMHAYV DALNFEGMDF GEAIRYYLRG FRLPGEAQKI DRVMEKFAER YCKCNPNSFT SADTAYVLAY SVIMLNTDAH NMMVKDKMSR SDFIRNNRGI
0701: DDGKDLPEVY LSTLYDQIVK NEIKMSADSS IPQNKQPSSV MKLLGLDNII NLVNWKQAED KALGANDLLI KNIQEKFKAK SGKSESVFYV ITDTTILRFM
0801: MEVCWAPMMA AFSMTLDQCD DKAATSQCLQ GFRYAVHVTS VMCMQTQRDA FVTSVAKFTY LHCVADMKQK NVDAVKAIIS IAIEDGDYLQ EAWEHVLTCL
0901: SRFEHLHLLG EGAPTDASFL TVPLVDSEEK TQKSSTNTAS KRTNALQNPA VMAAVRGGSY DSTTAKNNAS PLVTPDQINN FISNINLLDQ IGIFELNHIF
1001: AHSQRLNSNA IVAFVEALCK VAITELQSPT DPRIFCLTKI VEIAHYNMNR IRLVWSRIWK VLSDFFVSVG SSENLSVAIF VMDSLRQLAM KFLEREELAN
1101: YNFQNEFLRP FAVVMQKSNA SEVRELVVRC VSQMVLSRVN NIKSGWKSVF TVFTAAAADD RKSIVLLAFE TMEKIVRDYF PYITETETTT FTDCVKCLIT
1201: FTSSKFSSDA SLNAIAFLRF CAVKLAEEGF VCHDKDTDHQ SNNLDSSEGN AIAHKDDHVY FWVPLLAGLA RLTTDTRPTI RKGAVEVLFD ILKDHGELFS
1301: QNFWTNIFGS VIYPLFNGEI CTPNGQSGST EDDSWNFETK TVAVKCLVDL YVTFFDVMRP ELTRVTSVVT SFIRSAYRQS ASTGMSVFQR LTEGLASKLS
1401: KDEWKGILLC FKESAAHTLV VFDKIVKMMQ NIEIPERNKS YSEAEKYSDP EIYNEDEEEA NMETSSYAIV KMKNHMSLQL LIVQGIVKLY ETHRRSFCAE
1501: HMGIILEMLS AITSHASEVN SEFALHIKFH KACSLLEISE PAVIHFENES YQSYLKLLQA LLHDNPSLSR EMNIESQIML VSVKILRKYL NCAGQEPSKD
1601: ASCKDPVVHW ALPLCASKKE ELSARTPLVL HVMRLLGGLE RECFRRNLPL LFPLLANLVR CEHSSREVQV ALYDIFQSSV GPIISV
Best Arabidopsis Sequence Match ( AT4G38200.1 )
(BLAST)
0001: MSSSQNLGGA TRCGRVIGPS LDKIIKNAAW RKHTFLVSAC KSVLDKLEAL SDSPDPSSPL FGLTTSDADA VLQPLLLSLD TGYAKVIEPA LDCSFKLFSL
0101: SLLRGEVCSS SPDSLLYKLI HAICKVCGIG EESIELAVLR VLLAAVRSPR ILIRGDCLLH LVRTCYNVYL GGFNGTNQIC AKSVLAQIML IVFTRSEANS
0201: MDASLKTVNV NDLLAITDKN VNEGNSVHIC QGFINDVITA GEAAPPPDFA LVQPPEEGAS STEDEGTGSK IREDGFLLFK NLCKLSMKFS SQENTDDQIL
0301: VRGKTLSLEL LKVIIDNGGP IWLSDERFLN AIKQLLCLSL LKNSALSVMS IFQLQCAIFT TLLRKYRSGM KSEVGIFFPM LVLRVLENVL QPSFVQKMTV
0401: LSLLENICHD PNLIIDIFVN FDCDVESPNI FERIVNGLLK TALGPPPGSS TILSPVQDIT FRHESVKCLV SIIKAMGTWM DQQLSVGDSL LPKSLENEAP
0501: ANNHSNSNEE DGTTIDHDFH PDLNPESSDA ATLEQRRAYK IERQKGVTLF NRKPSKGIEF LISSKKVGNS PDEVVSFLRN TTGLNATMIG DYLGEREDFP
0601: MKVMHAYVDS FDFKEMNFGE AIRFFLRGFR LPGEAQKIDR IMEKFAERFC KCNPNSFSSA DTAYVLAYSV IMLNTDAHNI MVKEKMTKAD FIRNNRGIDD
0701: GKDLPEEYLG ALYDQVVINE IKMSSDSSAP ESRQSNGLNK LLGLDGILNL VYWTQTEEKA VGANGLLIKD IQEKFRSKSG KSESAYHVVT DVAILRFMVE
0801: VSWGPMLAAF SVTLDQSDDR LAAVECLRGF RYAVHVTAVM GMQTQRDAFV TSMAKFTNLH CAGDMKQKNV DAVKAIISIA IEDGNHLQDA WEHILTCLSR
0901: IEHLQLLGEG APSDASYFAS TETEEKKALG FPNLKKKGAL QNPVMMAVVR GGSYDSSTIG PNMPGLVKQD QINNFIANLN LLDQIGSFQL NNVYAHSQRL
1001: KTEAIVAFVK ALCKVSMSEL QSPTDPRVFS LTKLVEIAHY NMNRIRLVWS RIWSILSDFF VSVGLSENLS VAIFVMDSLR QLSMKFLERE ELANYNFQNE
1101: FLRPFVIVMQ KSSSAEIREL IVRCISQMVL SRVSNVKSGW KSVFKVFTTA AADERKNIVL LAFETMEKIV REYFSYITET EATTFTDCVR CLITFTNSTF
1201: TSDVSLNAIA FLRFCALKLA DGGLVWNEKG RSSSPSTPVT DDHSPSTQNF MDADENISYW VPLLTGLSKL TSDSRSAIRK SSLEVLFNIL KDHGHIFSRT
1301: FWIGVFSSVI YPIFNSVWGE NDLLSKDEHS SFPSTFSSHP SEVSWDAETS AMAAQYLVDL FVSFFTVIRS QLSSVVSLLA GLIRSPAQGP TVAGVGALLR
1401: LADELGDRFS ENEWKEIFLA VNEAASLTLS SFMKTLRTMD DIPDEDTLSD QDFSNEDDID EDSLQTMSYV VARTKSHITV QLQVVQVVTD LYRIHQQSLL
1501: ASHVTVILEI LSSISSHAHQ LNSDLILQKK VRRACSILEL SEPPMLHFEN DTFQNYLDIL QAIVTNNPGV SLELNVESQL MTVCMQILKM YLKCTLFQGD
1601: ELEETRQPKN WILPMGAASK EEAAARSPLV VAVLKALREL KRDSFKRYAP NFFPLLVELV RSEHSSSQVP QVLSTVFHTC MGAMMDE
Arabidopsis Description
BIG1Brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JSZ5]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.