Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 6
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G157000.1 | Wheat | plastid | 98.81 | 98.81 |
| TraesCS6B01G195700.1 | Wheat | plastid | 98.75 | 98.75 |
| HORVU6Hr1G034130.6 | Barley | plastid | 97.8 | 97.57 |
| KXG29692 | Sorghum | plastid | 86.86 | 86.19 |
| Zm00001d053688_P002 | Maize | plastid | 85.26 | 84.7 |
| TraesCS7A01G398300.1 | Wheat | cytosol, plastid | 74.73 | 74.33 |
| GSMUA_Achr8P34520_001 | Banana | cytosol | 9.27 | 69.96 |
| GSMUA_Achr1P09290_001 | Banana | mitochondrion | 65.76 | 66.47 |
| Solyc01g112350.2.1 | Tomato | extracellular, golgi, plasma membrane | 52.91 | 64.87 |
| VIT_03s0038g04090.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 63.2 | 62.46 |
| KRH13998 | Soybean | plastid | 62.01 | 60.85 |
| KRH74111 | Soybean | plastid | 61.83 | 60.43 |
| AT4G38200.1 | Thale cress | cytosol, mitochondrion, plastid | 58.68 | 58.51 |
| CDY59102 | Canola | cytosol, mitochondrion, plastid | 58.86 | 58.44 |
| CDY54791 | Canola | mitochondrion, nucleus, plastid | 58.8 | 58.38 |
| Bra033555.1-P | Field mustard | plastid | 57.85 | 57.64 |
| CDX69135 | Canola | plastid | 56.24 | 56.04 |
| CDX75498 | Canola | mitochondrion, plasma membrane, plastid | 56.06 | 55.86 |
| Bra011611.1-P | Field mustard | plastid | 55.95 | 55.45 |
| AT4G35380.1 | Thale cress | cytosol, plasma membrane, plastid | 55.47 | 54.69 |
| TraesCS4A01G067400.1 | Wheat | plastid | 49.23 | 46.31 |
| Solyc01g112340.2.1 | Tomato | plastid | 9.93 | 39.95 |
| TraesCS2A01G202900.1 | Wheat | cytosol | 29.79 | 31.61 |
| TraesCS5A01G361300.1 | Wheat | cytosol | 16.71 | 21.92 |
| TraesCS4A01G294900.1 | Wheat | cytosol | 17.78 | 21.12 |
| TraesCS3A01G098600.1 | Wheat | cytosol, plastid | 17.24 | 20.91 |
| TraesCS3A01G245300.1 | Wheat | cytosol | 16.35 | 19.84 |
Protein Annotations
| Gene3D:1.10.1000.11 | Gene3D:1.10.220.20 | MapMan:22.3.3.2 | InterPro:ARM-type_fold | InterPro:DCB_dom | GO:GO:0003674 |
| GO:GO:0005086 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0032012 | InterPro:IPR000904 | InterPro:IPR023394 | InterPro:Mon2_C | PFAM:PF01369 |
| PFAM:PF09324 | PFAM:PF12783 | PFAM:PF16206 | PFAM:PF16213 | PFscan:PS50190 | PANTHER:PTHR10663 |
| PANTHER:PTHR10663:SF108 | SMART:SM00222 | SUPFAM:SSF48371 | SUPFAM:SSF48425 | InterPro:Sec7_C | InterPro:Sec7_C_sf |
| InterPro:Sec7_N | InterPro:Sec7_dom | InterPro:Sec7_dom_sf | EnsemblPlantsGene:TraesCS6A01G168000 | EnsemblPlants:TraesCS6A01G168000.1 | TIGR:cd00171 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:172120653..172128903
Molecular Weight (calculated)
186736.0 Da
IEP (calculated)
5.473
GRAVY (calculated)
-0.030
Length
1682 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPTAPLGG STPSGRVLGP SLDRIIKNAA WRKHSALGAA AKSALDLLSS SSYHSPDPTS PNPSPLLGLP VAAAAASLHA LILALESASP KVADPALDCV
0101: AKLLYHRLLL GDLGEAADDS PASKLLAAVL SCGALNDDAM ELATLRVLLA AARCPSIAIR GDGLGQMLKT CYNIYLSSSS GANQMCAKLA LAQVLVIVFA
0201: RVEVDSMDVR VPTVSITDMM DVSDHRLNDP GIVQVAQGFI NDAMEGSDVP EPGTLGAMAE ADEKDDEGMS KIREDGLALF KNLCKLSMKF STPDNPEDQV
0301: LLRGKVLSLE LLKMVVDNAG PFWRINEKYL GAIKQYLCLS LLKNSALSAM SIFQLLCSIF VGLLSRFRSG LKEEIGIFFP MLVLRVLENV HQPSFLQKMT
0401: VLNLLEDICK ESQVLIDIFV NYDCDVDAPN IFERIVNGLL KTALGVTPGA TTTLTPVQDQ TFRTESVKCL ATILKSMGSW MDQQLRIGDF SPKISEVSLN
0501: SLDSPNIGED GNGIDYELQS DSYSPDTSDA SSLEQRRAYK IELQKGISMF NRKPSKGIDF LIKSKKIGQS PEDVASFLRN TAGLNATMIG DYLGERDEFP
0601: IKVMHAYVDA LNFEGIDFGE AIRYYLRGFR LPGEAQKIDR VMEKFAERYC KCNPNSFTSA DTAYVLAYSV IMLNTDAHNM MVKDKMSRSD FIRNNRGIDD
0701: GKDLPEVYLS TLYDQIVKNE IKMSADSSVP QNKQPSSVMK LLGLDNIINL VNWKQAEDKA LGANDLLIKN IQEKFKAKSA KSESVFYIIT DTTILRFMME
0801: VCWAPMMAAF SMTLDQCDDK AATSQCLQGF RYAVHVTSVM CMQTQRDAFV TSVAKFTYLH CVADMKQKNV DAVKAIISIA IEDGDYLQEA WEHVLTCLSR
0901: FEHLHLLGEG APTDASFLTV PLVDSEEKTQ KSSTNTASKR TNALQNPAVM AAVRGGSYDS TTAKNNASAL VTPDQINNFI SNINLLDQIG IFELNHIFAH
1001: SQRLNSNAIV AFVEALCKVA ITELQSPTDP RIFCLTKIVE IAHYNMNRIR LVWSRIWKVL SDFFVSVGSS ENLSVAIFVM DSLRQLAMKF LEREELANYN
1101: FQNEFLRPFA VVMQKSNASE VRELVVRCVS QMVLSRVNNI KSGWKSVFTV FTAAAADDRK SIVLLAFETM EKIVRDYFPY ITETETTTFT DCVKCLITFT
1201: SSKFSSDASL NAIAFLRFCA VKLAEEGFVC HDKDTDHQSN NLDSSEGNAI VHKDDHVYFW VPLLAGLARL TTDTRPTIRK GAVEVLFDIL KDHGELFSQS
1301: FWTNIFGSVI YPLFNGEIRT PNGQSDSTED DSWNFETKTV AVKCLVDLYV TFFDVMRPEL TRVTSVVTSF IRSAYRQSAI TGMSVFQRLT EGLASKLSKD
1401: EWKEILVCFK EAAAHTLVVF DKIVKMMQNI EIPERNESYS EAEKYSDPDI EDEEEANMET SSYAIVKMKN HMSLQLVIVQ GIVKLYETHR RSFCAEHMGI
1501: ILEMLSAITS HASEVSSESA LHNKFHKACS LLEISEPAVI HFENESYQSY LKLLQALLHD NPSLSREMNI ESQIMLVSVK ILRKYLNCAG QEPSKDASCK
1601: DPVVHWALPL SAAKKEELSA RTPLVLHVMR LLGGLERECF RRNLPLLFPL LANLVRCEHS SREVQVALYD VFQSSIGPII SV
0101: AKLLYHRLLL GDLGEAADDS PASKLLAAVL SCGALNDDAM ELATLRVLLA AARCPSIAIR GDGLGQMLKT CYNIYLSSSS GANQMCAKLA LAQVLVIVFA
0201: RVEVDSMDVR VPTVSITDMM DVSDHRLNDP GIVQVAQGFI NDAMEGSDVP EPGTLGAMAE ADEKDDEGMS KIREDGLALF KNLCKLSMKF STPDNPEDQV
0301: LLRGKVLSLE LLKMVVDNAG PFWRINEKYL GAIKQYLCLS LLKNSALSAM SIFQLLCSIF VGLLSRFRSG LKEEIGIFFP MLVLRVLENV HQPSFLQKMT
0401: VLNLLEDICK ESQVLIDIFV NYDCDVDAPN IFERIVNGLL KTALGVTPGA TTTLTPVQDQ TFRTESVKCL ATILKSMGSW MDQQLRIGDF SPKISEVSLN
0501: SLDSPNIGED GNGIDYELQS DSYSPDTSDA SSLEQRRAYK IELQKGISMF NRKPSKGIDF LIKSKKIGQS PEDVASFLRN TAGLNATMIG DYLGERDEFP
0601: IKVMHAYVDA LNFEGIDFGE AIRYYLRGFR LPGEAQKIDR VMEKFAERYC KCNPNSFTSA DTAYVLAYSV IMLNTDAHNM MVKDKMSRSD FIRNNRGIDD
0701: GKDLPEVYLS TLYDQIVKNE IKMSADSSVP QNKQPSSVMK LLGLDNIINL VNWKQAEDKA LGANDLLIKN IQEKFKAKSA KSESVFYIIT DTTILRFMME
0801: VCWAPMMAAF SMTLDQCDDK AATSQCLQGF RYAVHVTSVM CMQTQRDAFV TSVAKFTYLH CVADMKQKNV DAVKAIISIA IEDGDYLQEA WEHVLTCLSR
0901: FEHLHLLGEG APTDASFLTV PLVDSEEKTQ KSSTNTASKR TNALQNPAVM AAVRGGSYDS TTAKNNASAL VTPDQINNFI SNINLLDQIG IFELNHIFAH
1001: SQRLNSNAIV AFVEALCKVA ITELQSPTDP RIFCLTKIVE IAHYNMNRIR LVWSRIWKVL SDFFVSVGSS ENLSVAIFVM DSLRQLAMKF LEREELANYN
1101: FQNEFLRPFA VVMQKSNASE VRELVVRCVS QMVLSRVNNI KSGWKSVFTV FTAAAADDRK SIVLLAFETM EKIVRDYFPY ITETETTTFT DCVKCLITFT
1201: SSKFSSDASL NAIAFLRFCA VKLAEEGFVC HDKDTDHQSN NLDSSEGNAI VHKDDHVYFW VPLLAGLARL TTDTRPTIRK GAVEVLFDIL KDHGELFSQS
1301: FWTNIFGSVI YPLFNGEIRT PNGQSDSTED DSWNFETKTV AVKCLVDLYV TFFDVMRPEL TRVTSVVTSF IRSAYRQSAI TGMSVFQRLT EGLASKLSKD
1401: EWKEILVCFK EAAAHTLVVF DKIVKMMQNI EIPERNESYS EAEKYSDPDI EDEEEANMET SSYAIVKMKN HMSLQLVIVQ GIVKLYETHR RSFCAEHMGI
1501: ILEMLSAITS HASEVSSESA LHNKFHKACS LLEISEPAVI HFENESYQSY LKLLQALLHD NPSLSREMNI ESQIMLVSVK ILRKYLNCAG QEPSKDASCK
1601: DPVVHWALPL SAAKKEELSA RTPLVLHVMR LLGGLERECF RRNLPLLFPL LANLVRCEHS SREVQVALYD VFQSSIGPII SV
0001: MSSSQNLGGA TRCGRVIGPS LDKIIKNAAW RKHTFLVSAC KSVLDKLEAL SDSPDPSSPL FGLTTSDADA VLQPLLLSLD TGYAKVIEPA LDCSFKLFSL
0101: SLLRGEVCSS SPDSLLYKLI HAICKVCGIG EESIELAVLR VLLAAVRSPR ILIRGDCLLH LVRTCYNVYL GGFNGTNQIC AKSVLAQIML IVFTRSEANS
0201: MDASLKTVNV NDLLAITDKN VNEGNSVHIC QGFINDVITA GEAAPPPDFA LVQPPEEGAS STEDEGTGSK IREDGFLLFK NLCKLSMKFS SQENTDDQIL
0301: VRGKTLSLEL LKVIIDNGGP IWLSDERFLN AIKQLLCLSL LKNSALSVMS IFQLQCAIFT TLLRKYRSGM KSEVGIFFPM LVLRVLENVL QPSFVQKMTV
0401: LSLLENICHD PNLIIDIFVN FDCDVESPNI FERIVNGLLK TALGPPPGSS TILSPVQDIT FRHESVKCLV SIIKAMGTWM DQQLSVGDSL LPKSLENEAP
0501: ANNHSNSNEE DGTTIDHDFH PDLNPESSDA ATLEQRRAYK IERQKGVTLF NRKPSKGIEF LISSKKVGNS PDEVVSFLRN TTGLNATMIG DYLGEREDFP
0601: MKVMHAYVDS FDFKEMNFGE AIRFFLRGFR LPGEAQKIDR IMEKFAERFC KCNPNSFSSA DTAYVLAYSV IMLNTDAHNI MVKEKMTKAD FIRNNRGIDD
0701: GKDLPEEYLG ALYDQVVINE IKMSSDSSAP ESRQSNGLNK LLGLDGILNL VYWTQTEEKA VGANGLLIKD IQEKFRSKSG KSESAYHVVT DVAILRFMVE
0801: VSWGPMLAAF SVTLDQSDDR LAAVECLRGF RYAVHVTAVM GMQTQRDAFV TSMAKFTNLH CAGDMKQKNV DAVKAIISIA IEDGNHLQDA WEHILTCLSR
0901: IEHLQLLGEG APSDASYFAS TETEEKKALG FPNLKKKGAL QNPVMMAVVR GGSYDSSTIG PNMPGLVKQD QINNFIANLN LLDQIGSFQL NNVYAHSQRL
1001: KTEAIVAFVK ALCKVSMSEL QSPTDPRVFS LTKLVEIAHY NMNRIRLVWS RIWSILSDFF VSVGLSENLS VAIFVMDSLR QLSMKFLERE ELANYNFQNE
1101: FLRPFVIVMQ KSSSAEIREL IVRCISQMVL SRVSNVKSGW KSVFKVFTTA AADERKNIVL LAFETMEKIV REYFSYITET EATTFTDCVR CLITFTNSTF
1201: TSDVSLNAIA FLRFCALKLA DGGLVWNEKG RSSSPSTPVT DDHSPSTQNF MDADENISYW VPLLTGLSKL TSDSRSAIRK SSLEVLFNIL KDHGHIFSRT
1301: FWIGVFSSVI YPIFNSVWGE NDLLSKDEHS SFPSTFSSHP SEVSWDAETS AMAAQYLVDL FVSFFTVIRS QLSSVVSLLA GLIRSPAQGP TVAGVGALLR
1401: LADELGDRFS ENEWKEIFLA VNEAASLTLS SFMKTLRTMD DIPDEDTLSD QDFSNEDDID EDSLQTMSYV VARTKSHITV QLQVVQVVTD LYRIHQQSLL
1501: ASHVTVILEI LSSISSHAHQ LNSDLILQKK VRRACSILEL SEPPMLHFEN DTFQNYLDIL QAIVTNNPGV SLELNVESQL MTVCMQILKM YLKCTLFQGD
1601: ELEETRQPKN WILPMGAASK EEAAARSPLV VAVLKALREL KRDSFKRYAP NFFPLLVELV RSEHSSSQVP QVLSTVFHTC MGAMMDE
0101: SLLRGEVCSS SPDSLLYKLI HAICKVCGIG EESIELAVLR VLLAAVRSPR ILIRGDCLLH LVRTCYNVYL GGFNGTNQIC AKSVLAQIML IVFTRSEANS
0201: MDASLKTVNV NDLLAITDKN VNEGNSVHIC QGFINDVITA GEAAPPPDFA LVQPPEEGAS STEDEGTGSK IREDGFLLFK NLCKLSMKFS SQENTDDQIL
0301: VRGKTLSLEL LKVIIDNGGP IWLSDERFLN AIKQLLCLSL LKNSALSVMS IFQLQCAIFT TLLRKYRSGM KSEVGIFFPM LVLRVLENVL QPSFVQKMTV
0401: LSLLENICHD PNLIIDIFVN FDCDVESPNI FERIVNGLLK TALGPPPGSS TILSPVQDIT FRHESVKCLV SIIKAMGTWM DQQLSVGDSL LPKSLENEAP
0501: ANNHSNSNEE DGTTIDHDFH PDLNPESSDA ATLEQRRAYK IERQKGVTLF NRKPSKGIEF LISSKKVGNS PDEVVSFLRN TTGLNATMIG DYLGEREDFP
0601: MKVMHAYVDS FDFKEMNFGE AIRFFLRGFR LPGEAQKIDR IMEKFAERFC KCNPNSFSSA DTAYVLAYSV IMLNTDAHNI MVKEKMTKAD FIRNNRGIDD
0701: GKDLPEEYLG ALYDQVVINE IKMSSDSSAP ESRQSNGLNK LLGLDGILNL VYWTQTEEKA VGANGLLIKD IQEKFRSKSG KSESAYHVVT DVAILRFMVE
0801: VSWGPMLAAF SVTLDQSDDR LAAVECLRGF RYAVHVTAVM GMQTQRDAFV TSMAKFTNLH CAGDMKQKNV DAVKAIISIA IEDGNHLQDA WEHILTCLSR
0901: IEHLQLLGEG APSDASYFAS TETEEKKALG FPNLKKKGAL QNPVMMAVVR GGSYDSSTIG PNMPGLVKQD QINNFIANLN LLDQIGSFQL NNVYAHSQRL
1001: KTEAIVAFVK ALCKVSMSEL QSPTDPRVFS LTKLVEIAHY NMNRIRLVWS RIWSILSDFF VSVGLSENLS VAIFVMDSLR QLSMKFLERE ELANYNFQNE
1101: FLRPFVIVMQ KSSSAEIREL IVRCISQMVL SRVSNVKSGW KSVFKVFTTA AADERKNIVL LAFETMEKIV REYFSYITET EATTFTDCVR CLITFTNSTF
1201: TSDVSLNAIA FLRFCALKLA DGGLVWNEKG RSSSPSTPVT DDHSPSTQNF MDADENISYW VPLLTGLSKL TSDSRSAIRK SSLEVLFNIL KDHGHIFSRT
1301: FWIGVFSSVI YPIFNSVWGE NDLLSKDEHS SFPSTFSSHP SEVSWDAETS AMAAQYLVDL FVSFFTVIRS QLSSVVSLLA GLIRSPAQGP TVAGVGALLR
1401: LADELGDRFS ENEWKEIFLA VNEAASLTLS SFMKTLRTMD DIPDEDTLSD QDFSNEDDID EDSLQTMSYV VARTKSHITV QLQVVQVVTD LYRIHQQSLL
1501: ASHVTVILEI LSSISSHAHQ LNSDLILQKK VRRACSILEL SEPPMLHFEN DTFQNYLDIL QAIVTNNPGV SLELNVESQL MTVCMQILKM YLKCTLFQGD
1601: ELEETRQPKN WILPMGAASK EEAAARSPLV VAVLKALREL KRDSFKRYAP NFFPLLVELV RSEHSSSQVP QVLSTVFHTC MGAMMDE
Arabidopsis Description
BIG1Brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JSZ5]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.