Factsheet for Bra033555.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54791	Canola	mitochondrion, nucleus, plastid	99.05	98.7
AT4G38200.1	Thale cress	cytosol, mitochondrion, plastid	90.23	90.28
Solyc01g112350.2.1	Tomato	extracellular, golgi, plasma membrane	54.62	67.2
KRH74111	Soybean	plastid	68.01	66.71
VIT_03s0038g04090.t01	Wine grape	mitochondrion, plasma membrane, plastid	67.12	66.57
KRH13998	Soybean	plastid	67.54	66.51
Bra011611.1-P	Field mustard	plastid	66.47	66.12
GSMUA_Achr8P34520_001	Banana	cytosol	8.53	64.57
GSMUA_Achr1P09290_001	Banana	mitochondrion	58.23	59.07
TraesCS6D01G157000.1	Wheat	plastid	57.76	57.97
TraesCS6B01G195700.1	Wheat	plastid	57.64	57.85
TraesCS6A01G168000.1	Wheat	plastid	57.64	57.85
HORVU6Hr1G034130.6	Barley	plastid	57.52	57.59
KXG29692	Sorghum	plastid	57.52	57.29
Zm00001d053688_P002	Maize	plastid	57.41	57.24
HORVU7Hr1G093440.3	Barley	plastid	55.81	55.91
TraesCS7D01G392600.1	Wheat	cytosol, plasma membrane, plastid	55.92	55.89
TraesCS7A01G398300.1	Wheat	cytosol, plastid	55.81	55.71
OQU76719	Sorghum	plastid	54.21	54.99
TraesCS7B01G299100.1	Wheat	cytosol	54.5	54.37
Zm00001d046717_P009	Maize	plastid	55.15	54.25
Os06t0622800-01	Rice	plasma membrane	21.15	52.42
Solyc01g112340.2.1	Tomato	plastid	12.5	50.48
Bra032659.1-P	Field mustard	cytosol, plastid	47.99	46.23
Bra014466.1-P	Field mustard	cytosol	48.22	46.01
Bra019446.1-P	Field mustard	cytosol	31.04	29.99
Bra019694.1-P	Field mustard	cytosol	17.0	19.82
Bra040986.1-P	Field mustard	cytosol	16.05	18.91
Bra002249.1-P	Field mustard	cytosol	15.34	18.86
Bra028434.1-P	Field mustard	cytosol, plasma membrane, plastid	15.82	15.94

Protein Annotations

Gene3D:1.10.1000.11	Gene3D:1.10.220.20	MapMan:22.3.3.2	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra033555	EnsemblPlants:Bra033555.1
EnsemblPlants:Bra033555.1-P	InterPro:DCB_dom	GO:GO:0003674	GO:GO:0005086	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0032012	GO:GO:0065009
InterPro:IPR000904	InterPro:IPR023394	UniProt:M4EXL8	PFAM:PF01369	PFAM:PF09324	PFAM:PF12783
PFAM:PF16213	PFscan:PS50190	PANTHER:PTHR10663	PANTHER:PTHR10663:SF108	SMART:SM00222	SUPFAM:SSF48371
SUPFAM:SSF48425	InterPro:Sec7_C	InterPro:Sec7_C_sf	InterPro:Sec7_N	InterPro:Sec7_dom	InterPro:Sec7_dom_sf
UniParc:UPI000253F95C	SEG:seg	:	:	:	:

Description

AT4G38200 (E=0.0) | guanine nucleotide exchange family protein

Coordinates

chrA06:-:26249585..26256804

Molecular Weight (calculated)

187560.0 Da

IEP (calculated)

5.628

GRAVY (calculated)

0.014

Length

1688 amino acids

Sequence
(BLAST)

0001: MSSSQNLGGA TRCGRVVGPT LDKIIKNAAW RKHTFLVSAC KSVLDKLESL SDSPDPSSPL FGLSTSDSDA VLETLLLSLD TAYTKVVEPA LDCSFNLFSL
0101: SLLRGEVCSS SPDSLLYKLI HAICKVYSLG EESVELAVLR VLLAAVRSPL IMIRGDCLLH LVRTCYNVYL GGFNGTNQIC AKSVLAQIMI IVFTRSEANS
0201: MDVSSFKTVN VNDLLAITDK NVNEGNSVHI CQGFINDVVT AGEAAPPPDF RLVIEPGENP EDGGTSKIRE DGFLLFKNLC KLSMKFSSQE NTDDQILVRG
0301: KTLSLELLKV IVDNGGPIWR SDERQVLSLI LQSLCYMSIL ELTPKICRFL NAIKQYLCLS LLKNSALSVM SIFQLQCAIF TSLLRKYRSG MKSEVGIFFP
0401: MLVLRVLENV LQPSFLQKMT VLSLLDNICQ DPIVNGLLKT ALGPPPGSST TLTAVQDITF RHESVKCLVS IIKAMGTWMD QQFSVGESLL PKSVENEALG
0501: DNYSNPNEED GTTADHDFHP DLSSESSEAA TLEQRRAYKI ELQKGVALFN RKPSKGIEFL ISSKKVGSSP DEVVSFLRDT TSLNPTMIGD YLGEREEFPM
0601: KVMHAYVDSF DFKEMNFGEA IRFFLRGFRL PGEAQKIDRI MEKFAERFCK CNPNSFSSAD TAYVLAYSVI MLNTDAHNIM VKEKMTKADF IKNNRGIDDG
0701: KDLPEEYLGA LYDQVVKNEI KMSSDSSAPE SRQSNGLNKL LGLDGILNLV YWTQTEEKAV GANGLLIKHI QEKFRSKSGK SESAYHVVTD VAILRFMVDV
0801: SWGPMLAAFS VTLDQNDDRL AAVECLRGFR YAVHVTAVMG MQTQRDAFVT SMAKFTNLHC AGDMKQKNVD AVKAIISIAI EDGNHLQDAW EHILTCLSRI
0901: EHLQLLGEGA PSDASYFASS ETEEKKALGF PNLKKKGALQ NPVMMAVVRG GSYDSSAIGP NVSALVRQDQ INNFIANLNL LDQIGSFQLS NVYAHSQRLK
1001: TEAIVAFVKA LCKVSMSELQ SPTDPRVFSL TKLVEIAHYN MNRIRLVWSR IWSILSDFFV SVGLSENLSV AIFVMDSLRQ LSMKFLEREE LANYNFQNEF
1101: LRPFVIVMQK SSSAEIRELI VRCISQMVLS RVSNVKSGWK SVFKVFTTAA ADERKNIVVL AFETMEKIVR EYFSYITETE ATTFTDCVRC LITFTNSKFT
1201: NDVSLNAIAF LRFCALKLAD GGLVWNEKSR SSSPSTPVTD DCAPNIQNFM EVDENISYWV PLLTGLSKLT SDSRLAIRKS SLEVLFNILK DHGHLFSQTF
1301: WIGVFSSVIY PIFNSLWGEK DLLSKDKDEH SSLPSTYGPH SNGVSWDSET SAMAAQSLVD LFVSFFTVIR SQLSSVVSLL AGLIRSPAQG PTVAGIGALL
1401: RLADELGGRF SEDEWMEIFL AVKEAASLIL SSFMKILRII DDVQDEETLS DQDFSNEDNV DEDSLQTMSY VVSRTKSHIT VQLQVIQVVT DLYRVHQQSL
1501: LASHVAVILE ILSSITSHAH QLNSDLILQK KVRRACSILE LSEPPMLHFE NDTHQNYLEV LQDILTDNPG VSVELSIESQ LITVCVKILK MYLKCTVFEG
1601: AELEETKQPK NWILPMGAAA KEEAAARSPL VVAVLKALRG LKGDSFKRYA PTFFQLLVEL VRSEHINSQV PQVLSTVFHT CMGPMMGE

Best Arabidopsis Sequence Match ( AT4G38200.1 )
(BLAST)

0001: MSSSQNLGGA TRCGRVIGPS LDKIIKNAAW RKHTFLVSAC KSVLDKLEAL SDSPDPSSPL FGLTTSDADA VLQPLLLSLD TGYAKVIEPA LDCSFKLFSL
0101: SLLRGEVCSS SPDSLLYKLI HAICKVCGIG EESIELAVLR VLLAAVRSPR ILIRGDCLLH LVRTCYNVYL GGFNGTNQIC AKSVLAQIML IVFTRSEANS
0201: MDASLKTVNV NDLLAITDKN VNEGNSVHIC QGFINDVITA GEAAPPPDFA LVQPPEEGAS STEDEGTGSK IREDGFLLFK NLCKLSMKFS SQENTDDQIL
0301: VRGKTLSLEL LKVIIDNGGP IWLSDERFLN AIKQLLCLSL LKNSALSVMS IFQLQCAIFT TLLRKYRSGM KSEVGIFFPM LVLRVLENVL QPSFVQKMTV
0401: LSLLENICHD PNLIIDIFVN FDCDVESPNI FERIVNGLLK TALGPPPGSS TILSPVQDIT FRHESVKCLV SIIKAMGTWM DQQLSVGDSL LPKSLENEAP
0501: ANNHSNSNEE DGTTIDHDFH PDLNPESSDA ATLEQRRAYK IERQKGVTLF NRKPSKGIEF LISSKKVGNS PDEVVSFLRN TTGLNATMIG DYLGEREDFP
0601: MKVMHAYVDS FDFKEMNFGE AIRFFLRGFR LPGEAQKIDR IMEKFAERFC KCNPNSFSSA DTAYVLAYSV IMLNTDAHNI MVKEKMTKAD FIRNNRGIDD
0701: GKDLPEEYLG ALYDQVVINE IKMSSDSSAP ESRQSNGLNK LLGLDGILNL VYWTQTEEKA VGANGLLIKD IQEKFRSKSG KSESAYHVVT DVAILRFMVE
0801: VSWGPMLAAF SVTLDQSDDR LAAVECLRGF RYAVHVTAVM GMQTQRDAFV TSMAKFTNLH CAGDMKQKNV DAVKAIISIA IEDGNHLQDA WEHILTCLSR
0901: IEHLQLLGEG APSDASYFAS TETEEKKALG FPNLKKKGAL QNPVMMAVVR GGSYDSSTIG PNMPGLVKQD QINNFIANLN LLDQIGSFQL NNVYAHSQRL
1001: KTEAIVAFVK ALCKVSMSEL QSPTDPRVFS LTKLVEIAHY NMNRIRLVWS RIWSILSDFF VSVGLSENLS VAIFVMDSLR QLSMKFLERE ELANYNFQNE
1101: FLRPFVIVMQ KSSSAEIREL IVRCISQMVL SRVSNVKSGW KSVFKVFTTA AADERKNIVL LAFETMEKIV REYFSYITET EATTFTDCVR CLITFTNSTF
1201: TSDVSLNAIA FLRFCALKLA DGGLVWNEKG RSSSPSTPVT DDHSPSTQNF MDADENISYW VPLLTGLSKL TSDSRSAIRK SSLEVLFNIL KDHGHIFSRT
1301: FWIGVFSSVI YPIFNSVWGE NDLLSKDEHS SFPSTFSSHP SEVSWDAETS AMAAQYLVDL FVSFFTVIRS QLSSVVSLLA GLIRSPAQGP TVAGVGALLR
1401: LADELGDRFS ENEWKEIFLA VNEAASLTLS SFMKTLRTMD DIPDEDTLSD QDFSNEDDID EDSLQTMSYV VARTKSHITV QLQVVQVVTD LYRIHQQSLL
1501: ASHVTVILEI LSSISSHAHQ LNSDLILQKK VRRACSILEL SEPPMLHFEN DTFQNYLDIL QAIVTNNPGV SLELNVESQL MTVCMQILKM YLKCTLFQGD
1601: ELEETRQPKN WILPMGAASK EEAAARSPLV VAVLKALREL KRDSFKRYAP NFFPLLVELV RSEHSSSQVP QVLSTVFHTC MGAMMDE

Arabidopsis Description

BIG1Brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4JSZ5]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.